RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
UBS1	YBR165W	BRN1	P38170	754 aa		5.7	□□□□□ -1.5
UBS1	YBR165W	IMO32	P53219	342 aa		5.7	□□□□□ -1.5
UBS1	YBR165W	DIP5	P53388	608 aa		5.7	□□□□□ -1.5
UBS1	YBR165W	UFO1	Q04511	668 aa		5.7	□□□□□ -1.5
UBS1	YBR165W	COQ11	Q05892	277 aa		5.7	□□□□□ -1.5
UBS1	YBR165W	PHO5	P00635	467 aa		5.69	□□□□□ -1.5
UBS1	YBR165W	MF(ALPHA)2	P32435	120 aa		5.69	□□□□□ -1.5
UBS1	YBR165W	CDS1	P38221	457 aa		5.69	□□□□□ -1.5
UBS1	YBR165W	CRG1	P38892	291 aa	RIP-Chip data	5.69	□□□□□ -1.5	not detected
UBS1	YBR165W	UBP12	P39538	1254 aa		5.69	□□□□□ -1.5
UBS1	YBR165W	HLR1	Q04429	423 aa		5.69	□□□□□ -1.5
UBS1	YBR165W	VID28	P40547	921 aa		5.68	□□□□□ -1.5
UBS1	YBR165W	PMT6	P42934	759 aa		5.68	□□□□□ -1.5
UBS1	YBR165W	PEX2	P32800	271 aa		5.67	□□□□□ -1.5
UBS1	YBR165W	ELF1	P36053	145 aa		5.67	□□□□□ -1.5
UBS1	YBR165W	TMN3	P40071	706 aa		5.67	□□□□□ -1.5
UBS1	YBR165W	FTR1	P40088	404 aa		5.67	□□□□□ -1.5
UBS1	YBR165W	PRM2	P40534	656 aa		5.67	□□□□□ -1.5
UBS1	YBR165W	ENP2	P48234	707 aa	Known RBP	5.67	□□□□□ -1.5
UBS1	YBR165W	YDR179W-A	Q03983	463 aa		5.67	□□□□□ -1.5
UBS1	YBR165W	YNL162W-A	Q3E7A8	72 aa		5.67	□□□□□ -1.5
UBS1	YBR165W	MTC7	P32633	139 aa		5.66	□□□□□ -1.5
UBS1	YBR165W	DUG1	P43616	481 aa	Known RBP	5.66	□□□□□ -1.5
UBS1	YBR165W	DAK1	P54838	584 aa	Known RBP	5.66	□□□□□ -1.5
UBS1	YBR165W	NGL2	Q03264	515 aa	Known RBP	5.66	□□□□□ -1.5
UBS1	YBR165W	STE4	P18851	423 aa		5.65	□□□□□ -1.5
UBS1	YBR165W	CEF1	Q03654	590 aa	Predicted RBP	5.65	□□□□□ -1.5
UBS1	YBR165W	TUP1	P16649	713 aa		5.64	□□□□□ -1.51
UBS1	YBR165W	PMC1	P38929	1173 aa	Predicted RBP	5.64	□□□□□ -1.51
UBS1	YBR165W	GPP2	P40106	250 aa	Known RBP	5.64	□□□□□ -1.51
UBS1	YBR165W	MDM20	Q12387	796 aa	Known RBP	5.64	□□□□□ -1.51
UBS1	YBR165W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
UBS1	YBR165W	AIM44	Q99299	758 aa		5.64	□□□□□ -1.51
UBS1	YBR165W	TPK2	P06245	380 aa		5.63	□□□□□ -1.51
UBS1	YBR165W	STE12	P13574	688 aa		5.63	□□□□□ -1.51
UBS1	YBR165W	VPS34	P22543	875 aa		5.63	□□□□□ -1.51
UBS1	YBR165W	SAT4	P25333	603 aa	Known RBP	5.63	□□□□□ -1.51
UBS1	YBR165W	UGP1	P32861	499 aa	Known RBP	5.63	□□□□□ -1.51
UBS1	YBR165W	THI6	P41835	540 aa		5.63	□□□□□ -1.51
UBS1	YBR165W	ASN1	P49089	572 aa	Known RBP	5.63	□□□□□ -1.51
UBS1	YBR165W	YGR054W	P53235	642 aa	Known RBP	5.63	□□□□□ -1.51
UBS1	YBR165W	RPA135	P22138	1203 aa	Known RBP	5.62	□□□□□ -1.51
UBS1	YBR165W	MRPL7	P36519	292 aa		5.62	□□□□□ -1.51
UBS1	YBR165W	YDL183C	P48569	320 aa		5.62	□□□□□ -1.51
UBS1	YBR165W	RNR4	P49723	345 aa	Known RBP	5.62	□□□□□ -1.51
UBS1	YBR165W	TIM50	Q02776	476 aa		5.62	□□□□□ -1.51
UBS1	YBR165W	EFR3	Q03653	782 aa	Known RBP	5.62	□□□□□ -1.51
UBS1	YBR165W	SKY1	Q03656	742 aa		5.62	□□□□□ -1.51
UBS1	YBR165W	MRI1	Q06489	411 aa	Known RBP	5.62	□□□□□ -1.51
UBS1	YBR165W	DGR2	P32330	852 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	YMC1	P32331	307 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	GRX4	P32642	244 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	SER1	P33330	395 aa	Known RBP	5.61	□□□□□ -1.51
UBS1	YBR165W	YHR033W	P38690	423 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	PPE1	P38796	400 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	YGL117W	P53133	265 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	ARR3	Q06598	404 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	SLK19	Q08581	821 aa	Known RBP	5.61	□□□□□ -1.51
UBS1	YBR165W	OSW1	Q08692	278 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	AIM41	Q12032	185 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	RMP1	Q12530	201 aa		5.61	□□□□□ -1.51
UBS1	YBR165W	ADE5,7	P07244	802 aa	Known RBP	5.6	□□□□□ -1.51
UBS1	YBR165W	ATP12	P22135	325 aa		5.6	□□□□□ -1.51
UBS1	YBR165W	DAL3	P32459	195 aa		5.6	□□□□□ -1.51
UBS1	YBR165W	HXT4	P32467	576 aa		5.6	□□□□□ -1.51
UBS1	YBR165W	EUG1	P32474	517 aa		5.6	□□□□□ -1.51
UBS1	YBR165W	CPR8	P53728	308 aa		5.6	□□□□□ -1.51
UBS1	YBR165W	ARG7	Q04728	441 aa		5.6	□□□□□ -1.51
UBS1	YBR165W	YCG1	Q06680	1035 aa		5.6	□□□□□ -1.51
UBS1	YBR165W	TUF1	P02992	437 aa	Known RBP	5.59	□□□□□ -1.51
UBS1	YBR165W	HMG2	P12684	1045 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	HOP1	P20050	605 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	DHR2	P36009	735 aa	Predicted RBP	5.59	□□□□□ -1.51
UBS1	YBR165W	SRP68	P38687	599 aa	Known RBP	5.59	□□□□□ -1.51
UBS1	YBR165W	YEL025C	P39991	1188 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	YEN1	P40028	759 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	LRO1	P40345	661 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	NIT2	P47016	307 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	PEF1	P53238	335 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	THI7	Q05998	598 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	NGL1	Q08213	363 aa	Known RBP	5.59	□□□□□ -1.51
UBS1	YBR165W	ULA1	Q12059	462 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	YPR027C	Q12079	277 aa		5.59	□□□□□ -1.51
UBS1	YBR165W	CNE1	P27825	502 aa		5.58	□□□□□ -1.52
UBS1	YBR165W	EHT1	P38295	451 aa		5.58	□□□□□ -1.52
UBS1	YBR165W	IRC5	P43610	853 aa		5.58	□□□□□ -1.52
UBS1	YBR165W	YIP4	P53093	235 aa		5.58	□□□□□ -1.52
UBS1	YBR165W	TRS23	Q03784	219 aa		5.58	□□□□□ -1.52
UBS1	YBR165W	LEU2	P04173	364 aa	Predicted RBP	5.57	□□□□□ -1.52
UBS1	YBR165W	HOM2	P13663	365 aa	Known RBP	5.57	□□□□□ -1.52
UBS1	YBR165W	AEP2	P22136	580 aa		5.57	□□□□□ -1.52
UBS1	YBR165W	RMA1	P36001	430 aa	Known RBP	5.57	□□□□□ -1.52
UBS1	YBR165W	PIH1	P38768	344 aa		5.57	□□□□□ -1.52
UBS1	YBR165W	RPS15	Q01855	142 aa	Known RBP	5.57	□□□□□ -1.52
UBS1	YBR165W	MFM1	Q02783	413 aa		5.57	□□□□□ -1.52
UBS1	YBR165W	CAP1	P28495	268 aa	Known RBP	5.56	□□□□□ -1.52
UBS1	YBR165W	ORC2	P32833	620 aa		5.56	□□□□□ -1.52
UBS1	YBR165W	YBR071W	P38243	211 aa		5.56	□□□□□ -1.52
UBS1	YBR165W	FMP30	Q02883	468 aa		5.56	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms