RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091		G3V3G9	751 aa		12.5	□□□□□ -0.41
NECAP1-223	ENST00000640091	PRKAB2	O43741	272 aa		12.5	□□□□□ -0.41
NECAP1-223	ENST00000640091	GTF2I	P78347	998 aa		12.5	□□□□□ -0.41
NECAP1-223	ENST00000640091	DCAF8	Q5TAQ9	597 aa		12.5	□□□□□ -0.41
NECAP1-223	ENST00000640091	WDR66	Q8TBY9	1149 aa		12.5	□□□□□ -0.41
NECAP1-223	ENST00000640091	IL17RA	Q96F46	866 aa		12.5	□□□□□ -0.41
NECAP1-223	ENST00000640091	DBNDD1	Q9H9R9	158 aa		12.5	□□□□□ -0.41
NECAP1-223	ENST00000640091	HAND2	P61296	217 aa		12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	DYNLL1	P63167	89 aa	Known RBP	12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	ILDR2	Q71H61	639 aa		12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	FBXW7	Q969H0	707 aa		12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	SGIP1	Q9BQI5	828 aa		12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	LARP6	Q9BRS8	491 aa	Known RBP	12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	COA1	Q9GZY4	146 aa		12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	KCNQ5	Q9NR82	932 aa		12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	LRRC37A	A6NMS7	1700 aa		12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091		K7ELQ4	463 aa	Predicted RBP	12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	LDHB	P07195	334 aa	Known RBP	12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	SLK	Q9H2G2	1235 aa	Predicted RBP	12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	FOXD4L1	Q9NU39	408 aa		12.49	□□□□□ -0.41
NECAP1-223	ENST00000640091	CACNA1S	Q13698	1873 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	DUOX1	Q9NRD9	1551 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	MAGEB6P1	A0A0J9YX57	407 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	PTGER2	P43116	358 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	TGFB2	P61812	414 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	DIXDC1	Q155Q3	683 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	MFSD14B	Q5SR56	506 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	DZIP1	Q86YF9	867 aa	Known RBP	12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	TCEANC2	Q96MN5	208 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	EYA3	Q99504	573 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	MXD3	Q9BW11	206 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	SLC4A4	Q9Y6R1	1079 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	LTBP1	Q14766	1721 aa		12.48	□□□□□ -0.41
NECAP1-223	ENST00000640091	PATL2	C9JE40	543 aa	Known RBP	12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	AOC3	Q16853	763 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	TSGA10IP	Q3SY00	556 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	STOX1	Q6ZVD7	989 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	ZGPAT	Q8N5A5	531 aa	Known RBP	12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	SDR42E1	Q8WUS8	393 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	RIOK1	Q9BRS2	568 aa	Known RBP	12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	ZSWIM6	Q9HCJ5	1215 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	PIM2	Q9P1W9	311 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	SALL1	Q9NSC2	1324 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	GSG1L2	A8MUP6	293 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	ZBTB22	O15209	634 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	RUFY3	Q7L099	469 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	IFNL3	Q8IZI9	196 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	CTNNA3	Q9UI47	895 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	CYP46A1	Q9Y6A2	500 aa		12.47	□□□□□ -0.41
NECAP1-223	ENST00000640091	MYH7	P12883	1935 aa		12.46	□□□□□ -0.41
NECAP1-223	ENST00000640091	DOCK2	Q92608	1830 aa		12.46	□□□□□ -0.41
NECAP1-223	ENST00000640091	PSMA5	P28066	241 aa		12.46	□□□□□ -0.41
NECAP1-223	ENST00000640091	CC2D2B	Q6DHV5	1058 aa		12.46	□□□□□ -0.41
NECAP1-223	ENST00000640091	NEK1	Q96PY6	1258 aa		12.46	□□□□□ -0.41
NECAP1-223	ENST00000640091	TM6SF1	Q9BZW5	370 aa		12.46	□□□□□ -0.41
NECAP1-223	ENST00000640091	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.46	□□□□□ -0.41
NECAP1-223	ENST00000640091	PDRG1	Q9NUG6	133 aa		12.46	□□□□□ -0.41
NECAP1-223	ENST00000640091		E7EWF7	191 aa		12.46	□□□□□ -0.42
NECAP1-223	ENST00000640091		F8W031	263 aa	Predicted RBP	12.46	□□□□□ -0.42
NECAP1-223	ENST00000640091	ZNF213	O14771	459 aa		12.46	□□□□□ -0.42
NECAP1-223	ENST00000640091	AK2	P54819	239 aa		12.46	□□□□□ -0.42
NECAP1-223	ENST00000640091	IMMT	Q16891	758 aa	Known RBP	12.46	□□□□□ -0.42
NECAP1-223	ENST00000640091	BLOC1S2	Q6QNY1	142 aa		12.46	□□□□□ -0.42
NECAP1-223	ENST00000640091	TTC14	Q96N46	770 aa		12.46	□□□□□ -0.42
NECAP1-223	ENST00000640091	HSP90AA1	P07900	732 aa	Known RBP	12.45	□□□□□ -0.42
NECAP1-223	ENST00000640091	KRT32	Q14532	448 aa		12.45	□□□□□ -0.42
NECAP1-223	ENST00000640091	CCDC93	Q567U6	631 aa		12.45	□□□□□ -0.42
NECAP1-223	ENST00000640091	PODN	Q7Z5L7	613 aa		12.45	□□□□□ -0.42
NECAP1-223	ENST00000640091	CERS5	Q8N5B7	392 aa		12.45	□□□□□ -0.42
NECAP1-223	ENST00000640091	NAPB	Q9H115	298 aa		12.45	□□□□□ -0.42
NECAP1-223	ENST00000640091	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.45	□□□□□ -0.42
NECAP1-223	ENST00000640091	PPIP5K2	O43314	1243 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	ECE2	O60344	883 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	GNAT2	P19087	354 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	DALRD3	Q5D0E6	543 aa	Known RBP	12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	CHST3	Q7LGC8	479 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	RTKN2	Q8IZC4	609 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	STK11IP	Q8N1F8	1099 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	TBC1D22A	Q8WUA7	517 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	TMX3	Q96JJ7	454 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	INCENP	Q9NQS7	918 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	FAM205A	Q6ZU69	1335 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	SNED1	Q8TER0	1413 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	RPS6KB1	P23443	525 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	TDO2	P48775	406 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	KIAA2012	Q0VF49	1180 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	LRRC2	Q9BYS8	371 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	NBPF3	Q9H094	633 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	CD2AP	Q9Y5K6	639 aa		12.44	□□□□□ -0.42
NECAP1-223	ENST00000640091	MYH13	Q9UKX3	1938 aa		12.43	□□□□□ -0.42
NECAP1-223	ENST00000640091	SMIM22	K7EJ46	135 aa		12.43	□□□□□ -0.42
NECAP1-223	ENST00000640091	CTDSPL2	Q05D32	466 aa		12.43	□□□□□ -0.42
NECAP1-223	ENST00000640091	NLGN2	Q8NFZ4	835 aa		12.43	□□□□□ -0.42
NECAP1-223	ENST00000640091	NACAP1	Q9BZK3	213 aa		12.43	□□□□□ -0.42
NECAP1-223	ENST00000640091	BCS1L	Q9Y276	419 aa		12.43	□□□□□ -0.42
NECAP1-223	ENST00000640091	CHD4	Q14839	1912 aa		12.43	□□□□□ -0.42

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