RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 F13A1P00488 732 aa14.38□□□□□ -0.11
PAX6-258ENST00000639548 TM4SF1P30408 202 aa14.38□□□□□ -0.11
PAX6-258ENST00000639548 COL9A3Q14050 684 aaPredicted RBP14.38□□□□□ -0.11
PAX6-258ENST00000639548 CAVIN4Q5BKX8 364 aa14.38□□□□□ -0.11
PAX6-258ENST00000639548 MSL1Q68DK7 614 aa14.38□□□□□ -0.11
PAX6-258ENST00000639548 BICDL1Q6ZP65 573 aa14.38□□□□□ -0.11
PAX6-258ENST00000639548 RGS22Q8NE09 1264 aa14.38□□□□□ -0.11
PAX6-258ENST00000639548 STRBPQ96SI9 672 aaKnown RBP14.38□□□□□ -0.11
PAX6-258ENST00000639548 DENND2AQ9ULE3 1009 aa14.38□□□□□ -0.11
PAX6-258ENST00000639548 DDX49Q9Y6V7 483 aaKnown RBP14.38□□□□□ -0.11
PAX6-258ENST00000639548 DUOX1Q9NRD9 1551 aa14.38□□□□□ -0.11
PAX6-258ENST00000639548 CCDC88AQ3V6T2 1871 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 ZNF213O14771 459 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 BCAMP50895 628 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 NFIXQ14938 502 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 FBXO33Q7Z6M2 555 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 MB21D2Q8IYB1 491 aaPredicted RBP14.37□□□□□ -0.11
PAX6-258ENST00000639548 NCOA7Q8NI08 942 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 CELF1Q92879 486 aaKnown RBP14.37□□□□□ -0.11
PAX6-258ENST00000639548 WWC3Q9ULE0 1092 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 MTMR6Q9Y217 621 aa14.37□□□□□ -0.11
PAX6-258ENST00000639548 NRXN2Q9P2S2 1712 aa14.36□□□□□ -0.11
PAX6-258ENST00000639548 PATL2C9JE40 543 aaKnown RBP14.36□□□□□ -0.11
PAX6-258ENST00000639548 MCM5P33992 734 aa14.36□□□□□ -0.11
PAX6-258ENST00000639548 CSPP1Q1MSJ5 1256 aa14.36□□□□□ -0.11
PAX6-258ENST00000639548 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
PAX6-258ENST00000639548 LARP6Q9BRS8 491 aaKnown RBP14.36□□□□□ -0.11
PAX6-258ENST00000639548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.35□□□□□ -0.11
PAX6-258ENST00000639548 HMGN5P82970 282 aaKnown RBP14.35□□□□□ -0.11
PAX6-258ENST00000639548 TTLL5Q6EMB2 1281 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 C15orf52Q6ZUT6 534 aaKnown RBP14.35□□□□□ -0.11
PAX6-258ENST00000639548 NECAB1Q8N987 351 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 CNBD1Q8NA66 436 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 BRF1Q92994 677 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 MTA3Q9BTC8 594 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 KIF3AQ9Y496 699 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 CD2APQ9Y5K6 639 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 LRRC37AA6NMS7 1700 aa14.35□□□□□ -0.11
PAX6-258ENST00000639548 COL1A1P02452 1464 aaPredicted RBP14.35□□□□□ -0.11
PAX6-258ENST00000639548 IRS2Q9Y4H2 1338 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 GOLGA6L3A6NEY3 463 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 SNAP23O00161 211 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 PHF14O94880 888 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 GYS1P13807 737 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 FGD1P98174 961 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 CRY2Q49AN0 593 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 LARP1BQ659C4 914 aaKnown RBP14.34□□□□□ -0.11
PAX6-258ENST00000639548 SMIM5Q71RC9 77 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 MAGEB6Q8N7X4 407 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 FAM84BQ96KN1 310 aaPredicted RBP14.34□□□□□ -0.11
PAX6-258ENST00000639548 MYH15Q9Y2K3 1946 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 SALL1Q9NSC2 1324 aa14.34□□□□□ -0.11
PAX6-258ENST00000639548 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.11
PAX6-258ENST00000639548 ZNF445P59923 1031 aa14.33□□□□□ -0.11
PAX6-258ENST00000639548 TRDNQ13061 729 aa14.33□□□□□ -0.11
PAX6-258ENST00000639548 GRAPQ13588 217 aa14.33□□□□□ -0.11
PAX6-258ENST00000639548 RALYLQ86SE5 291 aaKnown RBP14.33□□□□□ -0.11
PAX6-258ENST00000639548 GRAPLQ8TC17 118 aaPredicted RBP14.33□□□□□ -0.11
PAX6-258ENST00000639548 LEMD3Q9Y2U8 911 aa14.33□□□□□ -0.11
PAX6-258ENST00000639548 GRIN3BO60391 1043 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 YBX3P16989 372 aaKnown RBP eCLIP14.32□□□□□ -0.12
PAX6-258ENST00000639548 MRE11P49959 708 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 SCRN1Q12765 414 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 NACAP1Q9BZK3 213 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 CNNM2Q9H8M5 875 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 LRP2BPQ9P2M1 347 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 A0A0G2JLW4 131 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 KLRG2A4D1S0 409 aaPredicted RBP14.32□□□□□ -0.12
PAX6-258ENST00000639548 GSG1L2A8MUP6 293 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 DHX16O60231 1041 aaKnown RBP14.32□□□□□ -0.12
PAX6-258ENST00000639548 MBD4O95243 580 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 PDIA3P30101 505 aaKnown RBP14.32□□□□□ -0.12
PAX6-258ENST00000639548 PRR5LQ6MZQ0 368 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 GIMAP6Q6P9H5 292 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 IFNL3Q8IZI9 196 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 NSUN7Q8NE18 718 aaKnown RBP14.32□□□□□ -0.12
PAX6-258ENST00000639548 GPT2Q8TD30 523 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 TMEM87BQ96K49 555 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 NBPF3Q9H094 633 aa14.32□□□□□ -0.12
PAX6-258ENST00000639548 ELP1O95163 1332 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 PRC1O43663 620 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 NCLP19338 710 aaKnown RBP14.31□□□□□ -0.12
PAX6-258ENST00000639548 HIBADHP31937 336 aaKnown RBP14.31□□□□□ -0.12
PAX6-258ENST00000639548 GYG1P46976 350 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 ANTXR2P58335 489 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 ST5P78524 1137 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 APOBRQ0VD83 1088 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 NAA16Q6N069 864 aaPredicted RBP14.31□□□□□ -0.12
PAX6-258ENST00000639548 TMC4Q7Z404 712 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 VPS37DQ86XT2 251 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 EPB41L4AQ9HCS5 686 aaPredicted RBP14.31□□□□□ -0.12
PAX6-258ENST00000639548 ANAPC4Q9UJX5 808 aa14.31□□□□□ -0.12
PAX6-258ENST00000639548 LTBP1Q14766 1721 aa14.3□□□□□ -0.12
PAX6-258ENST00000639548 XDHP47989 1333 aa14.3□□□□□ -0.12
PAX6-258ENST00000639548 LAMB1P07942 1786 aa14.3□□□□□ -0.12
PAX6-258ENST00000639548 NPHP1O15259 732 aa14.3□□□□□ -0.12
PAX6-258ENST00000639548 PCP11498 1178 aaKnown RBP14.3□□□□□ -0.12
PAX6-258ENST00000639548 HOXA10P31260 410 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms