RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 TRDNQ13061 729 aa19.58■□□□□ 0.72
HCG27-205ENST00000638546 RPGRQ92834 1020 aaKnown RBP19.58■□□□□ 0.72
HCG27-205ENST00000638546 ABCF2Q9UG63 623 aa19.58■□□□□ 0.72
HCG27-205ENST00000638546 UBR3Q6ZT12 1888 aa19.57■□□□□ 0.72
HCG27-205ENST00000638546 EVCP57679 992 aa19.57■□□□□ 0.72
HCG27-205ENST00000638546 SCRN1Q12765 414 aa19.57■□□□□ 0.72
HCG27-205ENST00000638546 CHST3Q7LGC8 479 aa19.57■□□□□ 0.72
HCG27-205ENST00000638546 NBPF3Q9H094 633 aa19.57■□□□□ 0.72
HCG27-205ENST00000638546 NAPBQ9H115 298 aa19.57■□□□□ 0.72
HCG27-205ENST00000638546 TFCP2L1Q9NZI6 479 aa19.57■□□□□ 0.72
HCG27-205ENST00000638546 LEMD3Q9Y2U8 911 aa19.57■□□□□ 0.72
HCG27-205ENST00000638546 DOCK2Q92608 1830 aa19.56■□□□□ 0.72
HCG27-205ENST00000638546 GSG1L2A8MUP6 293 aa19.56■□□□□ 0.72
HCG27-205ENST00000638546 DTNBO60941 627 aa19.56■□□□□ 0.72
HCG27-205ENST00000638546 APBA3O96018 575 aa19.56■□□□□ 0.72
HCG27-205ENST00000638546 KLRK1P26718 216 aa19.56■□□□□ 0.72
HCG27-205ENST00000638546 NACAP1Q9BZK3 213 aa19.56■□□□□ 0.72
HCG27-205ENST00000638546 A0A1B0GUL6 1792 aa19.56■□□□□ 0.72
HCG27-205ENST00000638546 CASZ1Q86V15 1759 aa19.56■□□□□ 0.72
HCG27-205ENST00000638546 TAF1P21675 1872 aa19.55■□□□□ 0.72
HCG27-205ENST00000638546 TNRC6CQ9HCJ0 1690 aaKnown RBP19.55■□□□□ 0.72
HCG27-205ENST00000638546 COL1A1P02452 1464 aaPredicted RBP19.55■□□□□ 0.72
HCG27-205ENST00000638546 VPS37CA5D8V6 355 aaPredicted RBP19.55■□□□□ 0.72
HCG27-205ENST00000638546 PDIA3P30101 505 aaKnown RBP19.55■□□□□ 0.72
HCG27-205ENST00000638546 CRY2Q49AN0 593 aa19.55■□□□□ 0.72
HCG27-205ENST00000638546 L1TD1Q5T7N2 865 aaKnown RBP19.55■□□□□ 0.72
HCG27-205ENST00000638546 LCORLQ8N3X6 602 aa19.55■□□□□ 0.72
HCG27-205ENST00000638546 SMARCC2Q8TAQ2 1214 aa19.55■□□□□ 0.72
HCG27-205ENST00000638546 RBM17Q96I25 401 aaKnown RBP19.55■□□□□ 0.72
HCG27-205ENST00000638546 EPB41L4AQ9HCS5 686 aaPredicted RBP19.55■□□□□ 0.72
HCG27-205ENST00000638546 SLC4A4Q9Y6R1 1079 aa19.55■□□□□ 0.72
HCG27-205ENST00000638546 MAGEB6P1A0A0J9YX57 407 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 GOLGA6L3A6NEY3 463 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 JAK2O60674 1132 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 MBD3O95983 291 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 NCLP19338 710 aaKnown RBP19.54■□□□□ 0.72
HCG27-205ENST00000638546 FOXD4L6Q3SYB3 417 aaPredicted RBP19.54■□□□□ 0.72
HCG27-205ENST00000638546 FOXD4L3Q6VB84 417 aaPredicted RBP19.54■□□□□ 0.72
HCG27-205ENST00000638546 TBC1D10CQ8IV04 446 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 IRS2Q9Y4H2 1338 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 FSD2A1L4K1 749 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 POLRMTO00411 1230 aaKnown RBP19.54■□□□□ 0.72
HCG27-205ENST00000638546 ANTXR2P58335 489 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 DDR1Q08345 913 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 MIGA1Q8NAN2 632 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 TMEM87AQ8NBN3 555 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 ANKIB1Q9P2G1 1089 aa19.54■□□□□ 0.72
HCG27-205ENST00000638546 ISY1Q9ULR0 285 aaKnown RBP19.54■□□□□ 0.72
HCG27-205ENST00000638546 XDHP47989 1333 aa19.53■□□□□ 0.72
HCG27-205ENST00000638546 PRKAB2O43741 272 aa19.53■□□□□ 0.72
HCG27-205ENST00000638546 NAA16Q6N069 864 aaPredicted RBP19.53■□□□□ 0.72
HCG27-205ENST00000638546 USP48Q86UV5 1035 aa19.53■□□□□ 0.72
HCG27-205ENST00000638546 GPT2Q8TD30 523 aa19.53■□□□□ 0.72
HCG27-205ENST00000638546 AKT1S1Q96B36 256 aa19.53■□□□□ 0.72
HCG27-205ENST00000638546 NAP1L2Q9ULW6 460 aaPredicted RBP19.53■□□□□ 0.72
HCG27-205ENST00000638546 MYO5AQ9Y4I1 1855 aaKnown RBP19.52■□□□□ 0.72
HCG27-205ENST00000638546 TDO2P48775 406 aa19.52■□□□□ 0.72
HCG27-205ENST00000638546 HMGN5P82970 282 aaKnown RBP19.52■□□□□ 0.72
HCG27-205ENST00000638546 TMED8Q6PL24 325 aaPredicted RBP19.52■□□□□ 0.72
HCG27-205ENST00000638546 FAM184AQ8NB25 1140 aa19.52■□□□□ 0.72
HCG27-205ENST00000638546 NSUN7Q8NE18 718 aaKnown RBP19.52■□□□□ 0.72
HCG27-205ENST00000638546 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.72
HCG27-205ENST00000638546 LAMA4Q16363 1823 aa19.52■□□□□ 0.72
HCG27-205ENST00000638546 BBOX1O75936 387 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 HOXA10P31260 410 aaPredicted RBP19.51■□□□□ 0.71
HCG27-205ENST00000638546 CCT2P78371 535 aaKnown RBP19.51■□□□□ 0.71
HCG27-205ENST00000638546 ZNF827Q17R98 1081 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 C15orf52Q6ZUT6 534 aaKnown RBP19.51■□□□□ 0.71
HCG27-205ENST00000638546 ADGRA1Q86SQ6 560 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 NLGN1Q8N2Q7 840 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 FLAD1Q8NFF5 587 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 KIF3AQ9Y496 699 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 KLRG2A4D1S0 409 aaPredicted RBP19.51■□□□□ 0.71
HCG27-205ENST00000638546 IGSF3O75054 1194 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 CTDNEP1O95476 244 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 CHAF1AQ13111 956 aaPredicted RBP19.51■□□□□ 0.71
HCG27-205ENST00000638546 CSPP1Q1MSJ5 1256 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 TXNRD3Q86VQ6 643 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 TMEM87BQ96K49 555 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 CRAMP1Q96RY5 1269 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 CNNM2Q9H8M5 875 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 BRPF3Q9ULD4 1205 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 CNPY2Q9Y2B0 182 aa19.51■□□□□ 0.71
HCG27-205ENST00000638546 KLF18A0A0U1RQI7 1052 aa19.5■□□□□ 0.71
HCG27-205ENST00000638546 PTPDC1A2A3K4 754 aa19.5■□□□□ 0.71
HCG27-205ENST00000638546 ATP2B4P23634 1241 aa19.5■□□□□ 0.71
HCG27-205ENST00000638546 SPTY2D1Q68D10 685 aaPredicted RBP19.5■□□□□ 0.71
HCG27-205ENST00000638546 CAVIN1Q6NZI2 390 aaKnown RBP19.5■□□□□ 0.71
HCG27-205ENST00000638546 CYB5R4Q7L1T6 521 aa19.5■□□□□ 0.71
HCG27-205ENST00000638546 CDC37L1Q7L3B6 337 aa19.5■□□□□ 0.71
HCG27-205ENST00000638546 DDX11Q96FC9 970 aa19.5■□□□□ 0.71
HCG27-205ENST00000638546 RIOK1Q9BRS2 568 aaKnown RBP19.5■□□□□ 0.71
HCG27-205ENST00000638546 KRT23Q9C075 422 aa19.5■□□□□ 0.71
HCG27-205ENST00000638546 DHX16O60231 1041 aaKnown RBP19.49■□□□□ 0.71
HCG27-205ENST00000638546 GPSM2P81274 684 aa19.49■□□□□ 0.71
HCG27-205ENST00000638546 CTDSPL2Q05D32 466 aa19.49■□□□□ 0.71
HCG27-205ENST00000638546 AKNAD1Q5T1N1 836 aa19.49■□□□□ 0.71
HCG27-205ENST00000638546 COL23A1Q86Y22 540 aaPredicted RBP19.49■□□□□ 0.71
HCG27-205ENST00000638546 NSUN4Q96CB9 384 aaKnown RBP19.49■□□□□ 0.71
HCG27-205ENST00000638546 GDPD2Q9HCC8 539 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms