RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 ZDHHC9Q9Y397 364 aa11.78□□□□□ -0.52
ATM-226ENST00000638443 GRAPQ13588 217 aa11.77□□□□□ -0.52
ATM-226ENST00000638443 TOB2Q14106 344 aaPredicted RBP11.77□□□□□ -0.52
ATM-226ENST00000638443 UBE4AQ14139 1066 aa11.77□□□□□ -0.52
ATM-226ENST00000638443 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.52
ATM-226ENST00000638443 ME3Q16798 604 aa11.77□□□□□ -0.52
ATM-226ENST00000638443 ADGRA1Q86SQ6 560 aa11.77□□□□□ -0.52
ATM-226ENST00000638443 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.52
ATM-226ENST00000638443 NECAB1Q8N987 351 aa11.77□□□□□ -0.52
ATM-226ENST00000638443 GRAPLQ8TC17 118 aaPredicted RBP11.77□□□□□ -0.52
ATM-226ENST00000638443 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.77□□□□□ -0.52
ATM-226ENST00000638443 DENND2AQ9ULE3 1009 aa11.77□□□□□ -0.52
ATM-226ENST00000638443 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
ATM-226ENST00000638443 LAMA4Q16363 1823 aa11.77□□□□□ -0.53
ATM-226ENST00000638443 UNCXA6NJT0 531 aa11.77□□□□□ -0.53
ATM-226ENST00000638443 CHST3Q7LGC8 479 aa11.77□□□□□ -0.53
ATM-226ENST00000638443 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
ATM-226ENST00000638443 NEK1Q96PY6 1258 aa11.77□□□□□ -0.53
ATM-226ENST00000638443 ABCF2Q9UG63 623 aa11.77□□□□□ -0.53
ATM-226ENST00000638443 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.53
ATM-226ENST00000638443 FGAP02671 866 aa11.76□□□□□ -0.53
ATM-226ENST00000638443 MCM4P33991 863 aa11.76□□□□□ -0.53
ATM-226ENST00000638443 ST5P78524 1137 aa11.76□□□□□ -0.53
ATM-226ENST00000638443 EN1Q05925 392 aaPredicted RBP11.76□□□□□ -0.53
ATM-226ENST00000638443 EZH2Q15910 746 aaKnown RBP11.76□□□□□ -0.53
ATM-226ENST00000638443 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
ATM-226ENST00000638443 MIGA1Q8NAN2 632 aa11.76□□□□□ -0.53
ATM-226ENST00000638443 E7EWF7 191 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 PSMA5P28066 241 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 STK3Q13188 491 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 UBE3CQ15386 1083 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 LRRFIP1Q32MZ4 808 aaKnown RBP11.75□□□□□ -0.53
ATM-226ENST00000638443 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 VPS37DQ86XT2 251 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
ATM-226ENST00000638443 ARMT1Q9H993 441 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 ANKRD31Q8N7Z5 1873 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 IRS2Q9Y4H2 1338 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 PRKAB2O43741 272 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 MBD4O95243 580 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 LCORLQ8N3X6 602 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 ZNF384Q8TF68 577 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 EPB41L4AQ9HCS5 686 aaPredicted RBP11.75□□□□□ -0.53
ATM-226ENST00000638443 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 LRP2BPQ9P2M1 347 aa11.75□□□□□ -0.53
ATM-226ENST00000638443 MAP3K12Q12852 859 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 CAVIN4Q5BKX8 364 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 ZSCAN25Q6NSZ9 544 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 OLFM4Q6UX06 510 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 Q6ZUG5 572 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 AIDAQ96BJ3 306 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 GPSM2P81274 684 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 CHAF1AQ13111 956 aaPredicted RBP11.74□□□□□ -0.53
ATM-226ENST00000638443 FBXO33Q7Z6M2 555 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
ATM-226ENST00000638443 IGSF5Q9NSI5 407 aa11.74□□□□□ -0.53
ATM-226ENST00000638443 APPP05067 770 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 MMP10P09238 476 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 COL11A2P13942 1736 aaPredicted RBP11.73□□□□□ -0.53
ATM-226ENST00000638443 CACNA1SQ13698 1873 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 KRT32Q14532 448 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
ATM-226ENST00000638443 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
ATM-226ENST00000638443 TBC1D10CQ8IV04 446 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 BRF1Q92994 677 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
ATM-226ENST00000638443 STRBPQ96SI9 672 aaKnown RBP11.73□□□□□ -0.53
ATM-226ENST00000638443 PDGFDQ9GZP0 370 aaPredicted RBP11.73□□□□□ -0.53
ATM-226ENST00000638443 ANKRD2Q9GZV1 360 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 INCENPQ9NQS7 918 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 RAI14Q9P0K7 980 aa11.73□□□□□ -0.53
ATM-226ENST00000638443 SMIM22K7EJ46 135 aa11.72□□□□□ -0.53
ATM-226ENST00000638443 PRDX5P30044 214 aa11.72□□□□□ -0.53
ATM-226ENST00000638443 NSFL1CQ9UNZ2 370 aaKnown RBP11.72□□□□□ -0.53
ATM-226ENST00000638443 PPFIA3O75145 1194 aa11.72□□□□□ -0.53
ATM-226ENST00000638443 BAG4O95429 457 aaKnown RBP11.72□□□□□ -0.53
ATM-226ENST00000638443 CYP7A1P22680 504 aa11.72□□□□□ -0.53
ATM-226ENST00000638443 HIBADHP31937 336 aaKnown RBP11.72□□□□□ -0.53
ATM-226ENST00000638443 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
ATM-226ENST00000638443 GNL3LQ9NVN8 582 aaKnown RBP11.72□□□□□ -0.53
ATM-226ENST00000638443 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
ATM-226ENST00000638443 MYH13Q9UKX3 1938 aa11.72□□□□□ -0.53
ATM-226ENST00000638443 DYNLL1P63167 89 aaKnown RBP11.71□□□□□ -0.53
ATM-226ENST00000638443 NUCB2P80303 420 aa11.71□□□□□ -0.53
ATM-226ENST00000638443 APOBRQ0VD83 1088 aa11.71□□□□□ -0.53
ATM-226ENST00000638443 IMMTQ16891 758 aaKnown RBP11.71□□□□□ -0.53
ATM-226ENST00000638443 DEFB132Q7Z7B7 95 aa11.71□□□□□ -0.53
ATM-226ENST00000638443 FBXO41Q8TF61 875 aa11.71□□□□□ -0.53
ATM-226ENST00000638443 SDR42E1Q8WUS8 393 aa11.71□□□□□ -0.53
ATM-226ENST00000638443 TACC3Q9Y6A5 838 aa11.71□□□□□ -0.53
ATM-226ENST00000638443 XDHP47989 1333 aa11.71□□□□□ -0.54
ATM-226ENST00000638443 TESPA1A2RU30 521 aaPredicted RBP11.71□□□□□ -0.54
ATM-226ENST00000638443 UFL1O94874 794 aa11.71□□□□□ -0.54
ATM-226ENST00000638443 BRD1O95696 1058 aa11.71□□□□□ -0.54
ATM-226ENST00000638443 GJB2P29033 226 aa11.71□□□□□ -0.54
ATM-226ENST00000638443 GRIK5Q16478 980 aa11.71□□□□□ -0.54
ATM-226ENST00000638443 DHX32Q7L7V1 743 aaKnown RBP11.71□□□□□ -0.54
ATM-226ENST00000638443 RBM17Q96I25 401 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms