RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 ZNF280AP59817 542 aaPredicted RBP4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 IRF5Q13568 498 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 RSPO4Q2I0M5 234 aaPredicted RBP4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SUPT20HL1Q3ZLR7 823 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CCDC174Q6PII3 467 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 NFATC2IPQ8NCF5 419 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 PIK3R5Q8WYR1 880 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 OPTNQ96CV9 577 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 COG3Q96JB2 828 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 MS4A4AQ96JQ5 239 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CRAMP1Q96RY5 1269 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 DBNDD1Q9H9R9 158 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ELP3Q9H9T3 547 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FZD1Q9UP38 647 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SRPK3Q9UPE1 567 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 LHX6Q9UPM6 363 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ATP11BQ9Y2G3 1177 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ATP6V0A2Q9Y487 856 aa4.31□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ITGB4P16144 1822 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 COL11A2P13942 1736 aaPredicted RBP4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ANKRD26Q9UPS8 1709 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 GAKO14976 1311 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 EVC2Q86UK5 1308 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 EP300Q09472 2414 aaPredicted RBP4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ST20-MTHFSA0A0A6YYL1 179 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 TNPO2O14787 897 aaKnown RBP4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CETPP11597 493 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 AVPR2P30518 371 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 HOXA10P31260 410 aaPredicted RBP4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 MTHFSP49914 203 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 RTP1P59025 263 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 WASHC4Q2M389 1173 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 PUS10Q3MIT2 529 aaKnown RBP4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 HDGFL2Q7Z4V5 671 aaPredicted RBP4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FRMD5Q7Z6J6 570 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 APOBEC3FQ8IUX4 373 aaKnown RBP4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 MTMR14Q8NCE2 650 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 AGBL3Q8NEM8 1001 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 KIF12Q96FN5 646 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SLC4A5Q9BY07 1137 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FAM50BQ9Y247 325 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SSC5DA1L4H1 1573 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ABCA12Q86UK0 2595 aa4.3□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SCN7AQ01118 1682 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 COL4A6Q14031 1691 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 POLR2AP24928 1970 aaKnown RBP4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CENPJQ9HC77 1338 aaPredicted RBP4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ANKRD31Q8N7Z5 1873 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SPDYE2BA6NHP3 402 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 GRXCR1A8MXD5 290 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 NBPF26B4DH59 902 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 RIMBP2O15034 1052 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 HMGCRP04035 888 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 VIL1P09327 827 aaKnown RBP4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SPDYE6P0CI01 402 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 IL9P15248 144 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SPDYE2Q495Y8 402 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CRY2Q49AN0 593 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 PTCRAQ6ISU1 281 aaPredicted RBP4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 CLEC4GQ6UXB4 293 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 TRIM67Q6ZTA4 783 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 OGFOD1Q8N543 542 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 EDAQ92838 391 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 COA7Q96BR5 231 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 NKX2-4Q9H2Z4 354 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 NIP7Q9Y221 180 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 MTCH2Q9Y6C9 303 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 DOPEY1Q5JWR5 2465 aa4.29□□□□□ -1.72
SCARNA4.1-201ENST00000628597 C5orf42Q9H799 3197 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 TEP1Q99973 2627 aaKnown RBP4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ZNF536O15090 1300 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SH3TC1Q8TE82 1336 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 BTBD19C9JJ37 291 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 GALR2O43603 387 aaPredicted RBP4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ECE2O60344 883 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 BBOX1O75936 387 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 PROS1P07225 676 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 POU3F3P20264 500 aaPredicted RBP4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FBLN1P23142 703 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 IL6STP40189 918 aaPredicted RBP4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ATXN1P54253 815 aaKnown RBP4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 FPGSQ05932 587 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 RRS1Q15050 365 aaKnown RBP4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 LEXMQ3ZCV2 418 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 HSP90AB2PQ58FF8 381 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 PPP2R2DQ66LE6 453 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 DZIP3Q86Y13 1208 aaKnown RBP4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 NYXQ9GZU5 481 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 MUTYHQ9UIF7 546 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 ANGPTL2Q9UKU9 493 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 USP34Q70CQ2 3546 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 MYO18BQ8IUG5 2567 aa4.28□□□□□ -1.72
SCARNA4.1-201ENST00000628597 A0A1W2PP64 1363 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ALPK3Q96L96 1907 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 ZNF831Q5JPB2 1677 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 COL1A1P02452 1464 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 C6orf229H3BNL8 230 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 TAF4O00268 1085 aa4.27□□□□□ -1.73
SCARNA4.1-201ENST00000628597 LMNAP02545 664 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms