RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 GPT2Q8TD30 523 aa23.27■■□□□ 1.32
TREX1-205ENST00000625293 ZMYM6O95789 1325 aa23.27■■□□□ 1.32
TREX1-205ENST00000625293 COL1A1P02452 1464 aaPredicted RBP23.26■■□□□ 1.31
TREX1-205ENST00000625293 HAND2P61296 217 aa23.26■■□□□ 1.31
TREX1-205ENST00000625293 DDR1Q08345 913 aa23.26■■□□□ 1.31
TREX1-205ENST00000625293 MB21D2Q8IYB1 491 aaPredicted RBP23.26■■□□□ 1.31
TREX1-205ENST00000625293 MAGEB6Q8N7X4 407 aa23.26■■□□□ 1.31
TREX1-205ENST00000625293 NLGN2Q8NFZ4 835 aa23.26■■□□□ 1.31
TREX1-205ENST00000625293 NBPF3Q9H094 633 aa23.26■■□□□ 1.31
TREX1-205ENST00000625293 EVCP57679 992 aa23.25■■□□□ 1.31
TREX1-205ENST00000625293 STK3Q13188 491 aa23.25■■□□□ 1.31
TREX1-205ENST00000625293 ALX1Q15699 326 aa23.25■■□□□ 1.31
TREX1-205ENST00000625293 CCDC24Q8N4L8 307 aa23.25■■□□□ 1.31
TREX1-205ENST00000625293 TMEM87AQ8NBN3 555 aa23.25■■□□□ 1.31
TREX1-205ENST00000625293 ISY1Q9ULR0 285 aaKnown RBP23.25■■□□□ 1.31
TREX1-205ENST00000625293 GOLGA6L3A6NEY3 463 aa23.24■■□□□ 1.31
TREX1-205ENST00000625293 ZNF213O14771 459 aa23.24■■□□□ 1.31
TREX1-205ENST00000625293 GYG1P46976 350 aa23.24■■□□□ 1.31
TREX1-205ENST00000625293 SCRN1Q12765 414 aa23.24■■□□□ 1.31
TREX1-205ENST00000625293 PDCP20941 246 aa23.24■■□□□ 1.31
TREX1-205ENST00000625293 L1TD1Q5T7N2 865 aaKnown RBP23.24■■□□□ 1.31
TREX1-205ENST00000625293 AIDAQ96BJ3 306 aa23.24■■□□□ 1.31
TREX1-205ENST00000625293 FAM84BQ96KN1 310 aaPredicted RBP23.24■■□□□ 1.31
TREX1-205ENST00000625293 WDR19Q8NEZ3 1342 aa23.23■■□□□ 1.31
TREX1-205ENST00000625293 APOBRQ0VD83 1088 aa23.23■■□□□ 1.31
TREX1-205ENST00000625293 FBXO33Q7Z6M2 555 aa23.23■■□□□ 1.31
TREX1-205ENST00000625293 SMARCC2Q8TAQ2 1214 aa23.23■■□□□ 1.31
TREX1-205ENST00000625293 LLPHQ9BRT6 129 aaKnown RBP23.23■■□□□ 1.31
TREX1-205ENST00000625293 GNL3LQ9NVN8 582 aaKnown RBP23.23■■□□□ 1.31
TREX1-205ENST00000625293 FGD1P98174 961 aa23.22■■□□□ 1.31
TREX1-205ENST00000625293 LARP1BQ659C4 914 aaKnown RBP23.22■■□□□ 1.31
TREX1-205ENST00000625293 ZNF274Q96GC6 653 aaPredicted RBP23.22■■□□□ 1.31
TREX1-205ENST00000625293 ANKRD2Q9GZV1 360 aa23.22■■□□□ 1.31
TREX1-205ENST00000625293 EPB41L4AQ9HCS5 686 aaPredicted RBP23.22■■□□□ 1.31
TREX1-205ENST00000625293 ATP6V1DQ9Y5K8 247 aa23.22■■□□□ 1.31
TREX1-205ENST00000625293 ZBTB22O15209 634 aa23.22■■□□□ 1.31
TREX1-205ENST00000625293 JAK2O60674 1132 aa23.22■■□□□ 1.31
TREX1-205ENST00000625293 MBD4O95243 580 aa23.22■■□□□ 1.31
TREX1-205ENST00000625293 ANTXR2P58335 489 aa23.22■■□□□ 1.31
TREX1-205ENST00000625293 NCOA7Q8NI08 942 aa23.22■■□□□ 1.31
TREX1-205ENST00000625293 PATL2C9JE40 543 aaKnown RBP23.21■■□□□ 1.31
TREX1-205ENST00000625293 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
TREX1-205ENST00000625293 CAVIN4Q5BKX8 364 aa23.21■■□□□ 1.31
TREX1-205ENST00000625293 CHST3Q7LGC8 479 aa23.21■■□□□ 1.31
TREX1-205ENST00000625293 PARP3Q9Y6F1 533 aa23.21■■□□□ 1.31
TREX1-205ENST00000625293 IRS2Q9Y4H2 1338 aa23.2■■□□□ 1.31
TREX1-205ENST00000625293 MBD3O95983 291 aa23.2■■□□□ 1.3
TREX1-205ENST00000625293 MCM5P33992 734 aa23.2■■□□□ 1.3
TREX1-205ENST00000625293 TBC1D10CQ8IV04 446 aa23.2■■□□□ 1.3
TREX1-205ENST00000625293 CNBD1Q8NA66 436 aa23.2■■□□□ 1.3
TREX1-205ENST00000625293 NSFL1CQ9UNZ2 370 aaKnown RBP23.2■■□□□ 1.3
TREX1-205ENST00000625293 PDS5AQ29RF7 1337 aaKnown RBP23.2■■□□□ 1.3
TREX1-205ENST00000625293 SEMA3EO15041 775 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 KLRK1P26718 216 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 PDIA3P30101 505 aaKnown RBP23.19■■□□□ 1.3
TREX1-205ENST00000625293 FOXD4L6Q3SYB3 417 aaPredicted RBP23.19■■□□□ 1.3
TREX1-205ENST00000625293 PRR5LQ6MZQ0 368 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 CAVIN1Q6NZI2 390 aaKnown RBP23.19■■□□□ 1.3
TREX1-205ENST00000625293 FOXD4L3Q6VB84 417 aaPredicted RBP23.19■■□□□ 1.3
TREX1-205ENST00000625293 CDC37L1Q7L3B6 337 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 USP48Q86UV5 1035 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 IFNL3Q8IZI9 196 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 NSUN7Q8NE18 718 aaKnown RBP23.19■■□□□ 1.3
TREX1-205ENST00000625293 ARMT1Q9H993 441 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 DENND2AQ9ULE3 1009 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 IQSEC3Q9UPP2 1182 aaPredicted RBP23.19■■□□□ 1.3
TREX1-205ENST00000625293 VPS37CA5D8V6 355 aaPredicted RBP23.19■■□□□ 1.3
TREX1-205ENST00000625293 PRC1O43663 620 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 CTDNEP1O95476 244 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 GAS2L3Q86XJ1 694 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 LRP2BPQ9P2M1 347 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 CNPY2Q9Y2B0 182 aa23.19■■□□□ 1.3
TREX1-205ENST00000625293 GSG1L2A8MUP6 293 aa23.18■■□□□ 1.3
TREX1-205ENST00000625293 GNAT2P19087 354 aa23.18■■□□□ 1.3
TREX1-205ENST00000625293 ZNF445P59923 1031 aa23.18■■□□□ 1.3
TREX1-205ENST00000625293 LCORLQ8N3X6 602 aa23.18■■□□□ 1.3
TREX1-205ENST00000625293 GDPD2Q9HCC8 539 aa23.18■■□□□ 1.3
TREX1-205ENST00000625293 GPHNQ9NQX3 736 aaPredicted RBP23.18■■□□□ 1.3
TREX1-205ENST00000625293 SALL1Q9NSC2 1324 aa23.18■■□□□ 1.3
TREX1-205ENST00000625293 TIAM2Q8IVF5 1701 aa23.17■■□□□ 1.3
TREX1-205ENST00000625293 APPP05067 770 aa23.17■■□□□ 1.3
TREX1-205ENST00000625293 GRAPQ13588 217 aa23.17■■□□□ 1.3
TREX1-205ENST00000625293 RALYLQ86SE5 291 aaKnown RBP23.17■■□□□ 1.3
TREX1-205ENST00000625293 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
TREX1-205ENST00000625293 NKX2-3Q8TAU0 364 aa23.17■■□□□ 1.3
TREX1-205ENST00000625293 CACNA1SQ13698 1873 aa23.16■■□□□ 1.3
TREX1-205ENST00000625293 SERPINB2P05120 415 aa23.16■■□□□ 1.3
TREX1-205ENST00000625293 XRCC6P12956 609 aaKnown RBP eCLIP23.16■■□□□ 1.3
TREX1-205ENST00000625293 NCLP19338 710 aaKnown RBP23.16■■□□□ 1.3
TREX1-205ENST00000625293 ZSCAN23Q3MJ62 389 aa23.16■■□□□ 1.3
TREX1-205ENST00000625293 ADGRA1Q86SQ6 560 aa23.16■■□□□ 1.3
TREX1-205ENST00000625293 NPHP1O15259 732 aa23.15■■□□□ 1.3
TREX1-205ENST00000625293 GADD45BO75293 160 aaPredicted RBP23.15■■□□□ 1.3
TREX1-205ENST00000625293 MRE11P49959 708 aa23.15■■□□□ 1.3
TREX1-205ENST00000625293 CRY2Q49AN0 593 aa23.15■■□□□ 1.3
TREX1-205ENST00000625293 VPS37DQ86XT2 251 aa23.15■■□□□ 1.3
TREX1-205ENST00000625293 TMEM63CQ9P1W3 806 aa23.15■■□□□ 1.3
TREX1-205ENST00000625293 RBM27Q9P2N5 1060 aaKnown RBP23.15■■□□□ 1.3
TREX1-205ENST00000625293 CD2APQ9Y5K6 639 aa23.15■■□□□ 1.3
TREX1-205ENST00000625293 PRKAB2O43741 272 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms