RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SLC26A6Q9BXS9 759 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 TEX13AQ9BXU3 409 aaPredicted RBP9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 DDX19AQ9NUU7 478 aaKnown RBP9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 LTN1O94822 1766 aa9.54□□□□□ -0.88
PTPDC1-204ENST00000620992 WDHD1O75717 1129 aaPredicted RBP9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 CDKL5O76039 1030 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 APBA3O96018 575 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 JDP2Q8WYK2 163 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 ZKSCAN3Q9BRR0 538 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 MACROD2A1Z1Q3 448 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 PRDM1O75626 825 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 LRMPQ12912 555 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 MCMDC2Q4G0Z9 681 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 C16orf45Q96MC5 204 aaPredicted RBP9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 CABP5Q9NP86 173 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 MAP1BP46821 2468 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 CYP21A2P08686 494 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 PDIA4P13667 645 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 HMGB2P26583 209 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 APOBRQ0VD83 1088 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 GTF3C6Q969F1 213 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 KCNF1Q9H3M0 494 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 TMX1Q9H3N1 280 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 WDR70Q9NW82 654 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 ORC3Q9UBD5 711 aaPredicted RBP9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 BAG3O95817 575 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 ATP5JP18859 108 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 EIF5P55010 431 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 PTPN12Q05209 780 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 MFSD6Q6ZSS7 791 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 MMRN2Q9H8L6 949 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 NRBP1Q9UHY1 535 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 CFAP45Q9UL16 551 aa9.53□□□□□ -0.88
PTPDC1-204ENST00000620992 PDE4DIPQ5VU43 2346 aa9.52□□□□□ -0.88
PTPDC1-204ENST00000620992 CCDC181Q5TID7 509 aa9.52□□□□□ -0.88
PTPDC1-204ENST00000620992 TCERG1LQ5VWI1 586 aa9.52□□□□□ -0.88
PTPDC1-204ENST00000620992 KIAA1524Q8TCG1 905 aa9.52□□□□□ -0.88
PTPDC1-204ENST00000620992 FTOQ9C0B1 505 aaKnown RBP eCLIP9.52□□□□□ -0.88
PTPDC1-204ENST00000620992 ZNF287Q9HBT7 754 aa9.52□□□□□ -0.88
PTPDC1-204ENST00000620992 SLC4A4Q9Y6R1 1079 aa9.52□□□□□ -0.88
PTPDC1-204ENST00000620992 KIF13AQ9H1H9 1805 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 CA8P35219 290 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 USP8P40818 1118 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 NAA16Q6N069 864 aaPredicted RBP9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 NCOA5Q9HCD5 579 aaKnown RBP9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 USP21Q9UK80 565 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 A0A087WWV3 80 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 STIM1Q13586 685 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 CATIPQ7Z7H3 387 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 PPFIBP1Q86W92 1011 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 CENPHQ9H3R5 247 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 CLSTN2Q9H4D0 955 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 COPRSQ9NQ92 184 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 MCM9Q9NXL9 1143 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 CLIP2Q9UDT6 1046 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 ELP1O95163 1332 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 ERBB3P21860 1342 aa9.52□□□□□ -0.89
PTPDC1-204ENST00000620992 MED23Q9ULK4 1368 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 CEP57L1Q8IYX8 460 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 PGBD1Q96JS3 809 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 UTP14AQ9BVJ6 771 aaKnown RBP9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 KLF18A0A0U1RQI7 1052 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 MYO1BO43795 1136 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 PHKG2P15735 406 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 IARSP41252 1262 aaKnown RBP9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 SCRN1Q12765 414 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 ERCC4Q92889 916 aaPredicted RBP9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 PKD2L1Q9P0L9 805 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 RIOK3O14730 519 aaKnown RBP9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 LDHCP07864 332 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 POLD1P28340 1107 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 ZNHIT6Q9NWK9 470 aaKnown RBP9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 SAP30BPQ9UHR5 308 aaKnown RBP9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 RGPD2P0DJD1 1756 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 UTYO14607 1347 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 CBX1P83916 185 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 TAF3Q5VWG9 929 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 KAT14Q9H8E8 782 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 NPHP4O75161 1426 aaPredicted RBP9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 NCAPD2Q15021 1401 aa9.51□□□□□ -0.89
PTPDC1-204ENST00000620992 PTPDC1A2A3K4 754 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 RUFY1Q96T51 708 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 HLA-DOAP06340 250 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 NEFHP12036 1026 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 TCP10Q12799 353 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 PAG1Q9NWQ8 432 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 ZBTB21Q9ULJ3 1066 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 GINS2Q9Y248 185 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 NFAT5O94916 1531 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 ADGRL3Q9HAR2 1447 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 TSPY3P0CV98 308 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 TSPY8P0CW00 308 aa9.5□□□□□ -0.89
PTPDC1-204ENST00000620992 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms