RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 MAST3O60307 1309 aa15.21■□□□□ 0.02
PPP4R3B-206ENST00000616407 CCP110O43303 1012 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 HS1BP3Q53T59 392 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 AOPEPQ8N6M6 819 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 C16orf45Q96MC5 204 aaPredicted RBP15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 ATG3Q9NT62 314 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 DENND2AQ9ULE3 1009 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 BCAMP50895 628 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 HLFQ16534 295 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 TTC6Q86TZ1 520 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 SYNE4Q8N205 404 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 SHPRHQ149N8 1683 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 ST5P78524 1137 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 TMC6Q7Z403 805 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 SLF2Q8IX21 1173 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 SMARCE1Q969G3 411 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 TFCP2L1Q9NZI6 479 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 PFKFB2O60825 505 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 MAP7D2Q96T17 732 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 ANKRD2Q9GZV1 360 aa15.2■□□□□ 0.02
PPP4R3B-206ENST00000616407 REREQ9P2R6 1566 aa15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 LIG1P18858 919 aa15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 TRAPPC3LQ5T215 181 aa15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 OSBP2Q969R2 916 aa15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 HIBADHP31937 336 aaKnown RBP15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 SCRN1Q12765 414 aa15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 PTPN14Q15678 1187 aa15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 CRACR2BQ8N4Y2 399 aaPredicted RBP15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 ZNF274Q96GC6 653 aaPredicted RBP15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 TCEAL9Q9UHQ7 104 aa15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 TOP1P11387 765 aaKnown RBP15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
PPP4R3B-206ENST00000616407 NOLC1Q14978 699 aaKnown RBP eCLIP15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 MTERF4Q7Z6M4 381 aaKnown RBP15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 SEC31BQ9NQW1 1179 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 TSPY3P0CV98 308 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 TSPY8P0CW00 308 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 KCNQ4P56696 695 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 GSTO1P78417 241 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 PDIA6Q15084 440 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 HSP90AA4PQ58FG1 418 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 F8W031 263 aaPredicted RBP15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 KRT18P05783 430 aaKnown RBP15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 TTLL11Q8NHH1 800 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 ZHX3Q9H4I2 956 aa15.18■□□□□ 0.02
PPP4R3B-206ENST00000616407 M0R2C6 588 aa15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 ADD1P35611 737 aaKnown RBP15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 GYG1P46976 350 aa15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 IL25Q9H293 177 aa15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 CLSTN2Q9H4D0 955 aa15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 PATL2C9JE40 543 aaKnown RBP15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 PDIA3P30101 505 aaKnown RBP15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 ZDHHC9Q9Y397 364 aa15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 TNNT1P13805 278 aa15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 ANO1Q5XXA6 986 aa15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
PPP4R3B-206ENST00000616407 TRIM75PA6NK02 468 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 LMOD1P29536 600 aaPredicted RBP15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 AFMP43652 599 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 ZNF804AQ7Z570 1209 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 PPP1R1BQ9UD71 204 aaPredicted RBP15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 IFNL3Q8IZI9 196 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 USP28Q96RU2 1077 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 PUS7LQ9H0K6 701 aaKnown RBP15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 CCDC96Q2M329 555 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 AKNAD1Q5T1N1 836 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 KRT40Q6A162 431 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 CNBD1Q8NA66 436 aa15.16■□□□□ 0.02
PPP4R3B-206ENST00000616407 CHRNDQ07001 517 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 ZNF622Q969S3 477 aaKnown RBP eCLIP15.15■□□□□ 0.021e-10■□□□□ 8.2
PPP4R3B-206ENST00000616407 TTC14Q96N46 770 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 RTL9Q8NET4 1388 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 NEMFO60524 1076 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 PTGS1P23219 599 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 HMGB2P26583 209 aaKnown RBP15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 NAP1L1P55209 391 aaKnown RBP15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 AATFQ9NY61 560 aaKnown RBP eCLIP15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 GSDMDP57764 484 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 FOXO4P98177 505 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 CCDC43Q96MW1 224 aaKnown RBP15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 ARGLU1Q9NWB6 273 aaPredicted RBP15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 UBA7P41226 1012 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 UBE3CQ15386 1083 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 KANK3Q6NY19 840 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 CABP5Q9NP86 173 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 ARHGAP23Q9P227 1491 aa15.15■□□□□ 0.02
PPP4R3B-206ENST00000616407 A0A0U1RQG5 324 aaPredicted RBP15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 NR1I2O75469 434 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 CALM1P0DP23 149 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 CALM2P0DP24 149 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 CALM3P0DP25 149 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 EPS15P42566 896 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 RABL6Q3YEC7 729 aaPredicted RBP15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 DIS3L2Q8IYB7 885 aaKnown RBP15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 CPLX3Q8WVH0 158 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms