RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 HIP1O00291 1037 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 TRIM66O15016 1216 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 APBA3O96018 575 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 CHRNDQ07001 517 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 NFIXQ14938 502 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 WASHC4Q2M389 1173 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 CCDC102BQ68D86 513 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
RTN1-209ENST00000611068 SYAP1Q96A49 352 aaPredicted RBP18.68■□□□□ 0.58
RTN1-209ENST00000611068 NOL10Q9BSC4 688 aaKnown RBP18.68■□□□□ 0.58
RTN1-209ENST00000611068 ZNF446Q9NWS9 450 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 RREB1Q92766 1687 aa18.67■□□□□ 0.58
RTN1-209ENST00000611068 TXNRD1Q16881 649 aa18.67■□□□□ 0.58
RTN1-209ENST00000611068 ZNF397Q8NF99 534 aaPredicted RBP18.67■□□□□ 0.58
RTN1-209ENST00000611068 RASSF4Q9H2L5 321 aa18.67■□□□□ 0.58
RTN1-209ENST00000611068 CREB3L3Q68CJ9 461 aa18.67■□□□□ 0.58
RTN1-209ENST00000611068 FBXO3Q9UK99 471 aa18.67■□□□□ 0.58
RTN1-209ENST00000611068 PUM3Q15397 648 aaKnown RBP18.66■□□□□ 0.58
RTN1-209ENST00000611068 ZNF772Q68DY9 489 aaPredicted RBP18.66■□□□□ 0.58
RTN1-209ENST00000611068 FBXO38Q6PIJ6 1188 aa18.66■□□□□ 0.58
RTN1-209ENST00000611068 TPTE2Q6XPS3 522 aa18.66■□□□□ 0.58
RTN1-209ENST00000611068 IDH1O75874 414 aaKnown RBP18.66■□□□□ 0.58
RTN1-209ENST00000611068 NECTIN1Q15223 517 aa18.66■□□□□ 0.58
RTN1-209ENST00000611068 MCMDC2Q4G0Z9 681 aa18.66■□□□□ 0.58
RTN1-209ENST00000611068 ANKRD18AQ8IVF6 992 aa18.66■□□□□ 0.58
RTN1-209ENST00000611068 MAP4K1Q92918 833 aa18.66■□□□□ 0.58
RTN1-209ENST00000611068 TMX3Q96JJ7 454 aa18.66■□□□□ 0.58
RTN1-209ENST00000611068 CCDC112Q8NEF3 446 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 NEK11Q8NG66 645 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 NLRP3Q96P20 1036 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.65■□□□□ 0.58
RTN1-209ENST00000611068 MROH5Q6ZUA9 1318 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 M0R2C6 588 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 SLC27A2O14975 620 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 TNNT1P13805 278 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 RXRBP28702 533 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 OSBP2Q969R2 916 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 LCMT1Q9UIC8 334 aa18.65■□□□□ 0.58
RTN1-209ENST00000611068 PTGS1P23219 599 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 SYT10Q6XYQ8 523 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 C10orf67Q8IYJ2 551 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 LPIN2Q92539 896 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 DDX60Q8IY21 1712 aaKnown RBP18.64■□□□□ 0.57
RTN1-209ENST00000611068 GYG1P46976 350 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 ANAPC15P60006 121 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 GTF3C6Q969F1 213 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 PIH1D3Q9NQM4 214 aaKnown RBP18.64■□□□□ 0.57
RTN1-209ENST00000611068 TFCP2L1Q9NZI6 479 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 SPEF2Q9C093 1822 aa18.64■□□□□ 0.57
RTN1-209ENST00000611068 RNF113AO15541 343 aaKnown RBP18.63■□□□□ 0.57
RTN1-209ENST00000611068 CDC5LQ99459 802 aaKnown RBP18.63■□□□□ 0.57
RTN1-209ENST00000611068 C4BP0C0L5 1744 aa18.63■□□□□ 0.57
RTN1-209ENST00000611068 MED23Q9ULK4 1368 aa18.63■□□□□ 0.57
RTN1-209ENST00000611068 SLC5A1P13866 664 aa18.63■□□□□ 0.57
RTN1-209ENST00000611068 LRMPQ12912 555 aa18.63■□□□□ 0.57
RTN1-209ENST00000611068 FGFR2P21802 821 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 KLRK1P26718 216 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 AK2P54819 239 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 PUS7LQ9H0K6 701 aaKnown RBP18.62■□□□□ 0.57
RTN1-209ENST00000611068 TOMM22Q9NS69 142 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 GYS1P13807 737 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 ZKSCAN1P17029 563 aaPredicted RBP18.62■□□□□ 0.57
RTN1-209ENST00000611068 ICE2Q659A1 982 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 TTLL5Q6EMB2 1281 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 NYXQ9GZU5 481 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 ZNF215Q9UL58 517 aaPredicted RBP18.62■□□□□ 0.57
RTN1-209ENST00000611068 MAST3O60307 1309 aa18.62■□□□□ 0.57
RTN1-209ENST00000611068 RASGRF1Q13972 1273 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 ZNF827Q17R98 1081 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 CT47A1Q5JQC4 288 aaPredicted RBP18.61■□□□□ 0.57
RTN1-209ENST00000611068 SLC9C2Q5TAH2 1124 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 POTEAQ6S8J7 498 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 HMG20BQ9P0W2 317 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 RGS17Q9UGC6 210 aaPredicted RBP18.61■□□□□ 0.57
RTN1-209ENST00000611068 JAG2Q9Y219 1238 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 BRD1O95696 1058 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 FAM193AP78312 1265 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 SF3B3Q15393 1217 aaKnown RBP18.61■□□□□ 0.57
RTN1-209ENST00000611068 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 MINPP1Q9UNW1 487 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 TAF1LQ8IZX4 1826 aa18.61■□□□□ 0.57
RTN1-209ENST00000611068 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 HSP90B1P14625 803 aaKnown RBP18.6■□□□□ 0.57
RTN1-209ENST00000611068 ELF2Q15723 593 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 ZMYM1Q5SVZ6 1142 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 ZNF592Q92610 1267 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 LY75O60449 1722 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 RPS8P62241 208 aaKnown RBP18.6■□□□□ 0.57
RTN1-209ENST00000611068 CREBRFQ8IUR6 639 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 LRRC2Q9BYS8 371 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 WWC3Q9ULE0 1092 aa18.6■□□□□ 0.57
RTN1-209ENST00000611068 MYO1CO00159 1063 aa18.59■□□□□ 0.57
RTN1-209ENST00000611068 LARGE1O95461 756 aa18.59■□□□□ 0.57
RTN1-209ENST00000611068 HAND2P61296 217 aa18.59■□□□□ 0.57
RTN1-209ENST00000611068 MSL1Q68DK7 614 aa18.59■□□□□ 0.57
RTN1-209ENST00000611068 RUFY3Q7L099 469 aa18.59■□□□□ 0.57
RTN1-209ENST00000611068 MYCBPQ99417 103 aaPredicted RBP18.59■□□□□ 0.57
RTN1-209ENST00000611068 PDRG1Q9NUG6 133 aa18.59■□□□□ 0.57
RTN1-209ENST00000611068 CICQ96RK0 1608 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms