RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 ZDHHC9Q9Y397 364 aa9.05□□□□□ -0.96
LMBR1-221ENST00000609774 AOC2O75106 756 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 A1BGP04217 495 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 UBE2HP62256 183 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.96
LMBR1-221ENST00000609774 HSP90AB4PQ58FF6 505 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 PIBF1Q8WXW3 757 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 CCDC94Q9BW85 323 aaPredicted RBP9.04□□□□□ -0.96
LMBR1-221ENST00000609774 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 BABAM1Q9NWV8 329 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 GPRC5DQ9NZD1 345 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 RBM27Q9P2N5 1060 aaKnown RBP9.04□□□□□ -0.96
LMBR1-221ENST00000609774 TAOK2Q9UL54 1235 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 HDAC5Q9UQL6 1122 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 CACNA1FO60840 1977 aa9.04□□□□□ -0.96
LMBR1-221ENST00000609774 GNAT3A8MTJ3 354 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 TRIM6-TRIM34B2RNG4 842 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 TRAF5O00463 557 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 SMARCA5O60264 1052 aaPredicted RBP9.03□□□□□ -0.96
LMBR1-221ENST00000609774 CHMLP26374 656 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 RBM10P98175 930 aaKnown RBP9.03□□□□□ -0.96
LMBR1-221ENST00000609774 ATP8B2P98198 1209 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 CCDC30Q5VVM6 783 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 OLFM4Q6UX06 510 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 RUFY2Q8WXA3 655 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 ZSCAN31Q96LW9 406 aaPredicted RBP9.03□□□□□ -0.96
LMBR1-221ENST00000609774 CRAMP1Q96RY5 1269 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 MEIS3Q99687 375 aa9.03□□□□□ -0.96
LMBR1-221ENST00000609774 RTFDC1Q9BY42 306 aaPredicted RBP9.03□□□□□ -0.96
LMBR1-221ENST00000609774 AKAP11Q9UKA4 1901 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 APBB1O00213 710 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 NPHP1O15259 732 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 GTF2F1P35269 517 aaKnown RBP eCLIP9.02□□□□□ -0.97
LMBR1-221ENST00000609774 TEFQ10587 303 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 PKP1Q13835 747 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 CDC37L1Q7L3B6 337 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 TMC2Q8TDI7 906 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 RILPL2Q969X0 211 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 USP25Q9UHP3 1055 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 TSPYL4Q9UJ04 414 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 TSKSQ9UJT2 592 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 USP16Q9Y5T5 823 aa9.02□□□□□ -0.97
LMBR1-221ENST00000609774 NUP98P52948 1817 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 FAM155AB1AL88 458 aaPredicted RBP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 ERVV-1B6SEH8 477 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 CELF2O95319 508 aaKnown RBP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 ZSCAN22P10073 491 aaPredicted RBP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 HSPA4P34932 840 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 NOLC1Q14978 699 aaKnown RBP eCLIP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 UTP14CQ5TAP6 766 aaKnown RBP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 CIAPIN1Q6FI81 312 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 SLC4A10Q6U841 1118 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 RNF214Q8ND24 703 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 OTUD7AQ8TE49 926 aaPredicted RBP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 SH2B1Q9NRF2 756 aaPredicted RBP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 LIMCH1Q9UPQ0 1083 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 SMC3Q9UQE7 1217 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 NIP7Q9Y221 180 aaKnown RBP eCLIP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 KIF3AQ9Y496 699 aa9.01□□□□□ -0.97
LMBR1-221ENST00000609774 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.01□□□□□ -0.97
LMBR1-221ENST00000609774 NBPF26B4DH59 902 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 SNRPA1P09661 255 aaKnown RBP9□□□□□ -0.97
LMBR1-221ENST00000609774 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
LMBR1-221ENST00000609774 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
LMBR1-221ENST00000609774 PAXIP1Q6ZW49 1069 aaPredicted RBP9□□□□□ -0.97
LMBR1-221ENST00000609774 USP48Q86UV5 1035 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 LARGE2Q8N3Y3 721 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 NBPF15Q8N660 670 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 GTPBP4Q9BZE4 634 aaKnown RBP9□□□□□ -0.97
LMBR1-221ENST00000609774 NYXQ9GZU5 481 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 SPTLC3Q9NUV7 552 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 ZNRF3Q9ULT6 936 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 SALL3Q9BXA9 1300 aa9□□□□□ -0.97
LMBR1-221ENST00000609774 KDM4AO75164 1064 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 ADCY5O95622 1261 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 CCDC192P0DO97 292 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 PDCP20941 246 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 HIRAP54198 1017 aaPredicted RBP8.99□□□□□ -0.97
LMBR1-221ENST00000609774 CXCL9Q07325 125 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 DCTN1Q14203 1278 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 PKN2Q16513 984 aaKnown RBP8.99□□□□□ -0.97
LMBR1-221ENST00000609774 NIM1KQ8IY84 436 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 PDCL2Q8N4E4 241 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 CCDC102AQ96A19 550 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 GPATCH3Q96I76 525 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 LAMB4A4D0S4 1761 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 ABCC12Q96J65 1359 aa8.99□□□□□ -0.97
LMBR1-221ENST00000609774 HIP1O00291 1037 aa8.98□□□□□ -0.97
LMBR1-221ENST00000609774 STX6O43752 255 aa8.98□□□□□ -0.97
LMBR1-221ENST00000609774 CAVIN2O95810 425 aa8.98□□□□□ -0.97
LMBR1-221ENST00000609774 UBTFL1P0CB47 393 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 FKBP5Q13451 457 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 FOXD4L5Q5VV16 416 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 RGMBQ6NW40 437 aa8.98□□□□□ -0.97
LMBR1-221ENST00000609774 CTU1Q7Z7A3 348 aaKnown RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 SUPT20HQ8NEM7 779 aa8.98□□□□□ -0.97
LMBR1-221ENST00000609774 FOXD4L4Q8WXT5 416 aaPredicted RBP8.98□□□□□ -0.97
LMBR1-221ENST00000609774 KIF1BPQ96EK5 621 aa8.98□□□□□ -0.97
LMBR1-221ENST00000609774 ZIC5Q96T25 663 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms