RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 ZNF384Q8TF68 577 aa22.79■■□□□ 1.24
TUBB4B-202ENST00000604929 ZNF622Q969S3 477 aaKnown RBP eCLIP22.79■■□□□ 1.24
TUBB4B-202ENST00000604929 C6orf229H3BNL8 230 aa22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 HMGB1P09429 215 aaKnown RBP22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 NPR1P16066 1061 aa22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 PRDX5P30044 214 aa22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 NUCB2P80303 420 aa22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 STK3Q13188 491 aa22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 IFNL3Q8IZI9 196 aa22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 ALDH8A1Q9H2A2 487 aaPredicted RBP22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 SLC4A4Q9Y6R1 1079 aa22.78■■□□□ 1.24
TUBB4B-202ENST00000604929 FOXD4L5Q5VV16 416 aaPredicted RBP22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 NAA16Q6N069 864 aaPredicted RBP22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 SP8Q8IXZ3 490 aa22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 TBC1D16Q8TBP0 767 aa22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 FOXD4L4Q8WXT5 416 aaPredicted RBP22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 ANKRD31Q8N7Z5 1873 aa22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 RGPD3A6NKT7 1758 aaPredicted RBP22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 RGPD4Q7Z3J3 1758 aa22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 GSG1L2A8MUP6 293 aa22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 MECOMQ03112 1051 aa22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 ZNF804AQ7Z570 1209 aa22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 SH2B1Q9NRF2 756 aaPredicted RBP22.77■■□□□ 1.24
TUBB4B-202ENST00000604929 MAGEB6P1A0A0J9YX57 407 aa22.76■■□□□ 1.23
TUBB4B-202ENST00000604929 ALDH1B1P30837 517 aa22.76■■□□□ 1.23
TUBB4B-202ENST00000604929 EXOSC10Q01780 885 aaKnown RBP22.76■■□□□ 1.23
TUBB4B-202ENST00000604929 TDRD7Q8NHU6 1098 aaKnown RBP22.76■■□□□ 1.23
TUBB4B-202ENST00000604929 BRF1Q92994 677 aa22.76■■□□□ 1.23
TUBB4B-202ENST00000604929 NSUN4Q96CB9 384 aaKnown RBP22.76■■□□□ 1.23
TUBB4B-202ENST00000604929 EPB41L4AQ9HCS5 686 aaPredicted RBP22.76■■□□□ 1.23
TUBB4B-202ENST00000604929 MCM4P33991 863 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 DYNLL1P63167 89 aaKnown RBP22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 MASTLQ96GX5 879 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 NBPF3Q9H094 633 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 NAPBQ9H115 298 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 PODXL2Q9NZ53 605 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 ZDHHC9Q9Y397 364 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 ATP6V0A2Q9Y487 856 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 ST3GAL1Q11201 340 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 CD209Q9NNX6 404 aa22.75■■□□□ 1.23
TUBB4B-202ENST00000604929 RIMBP2O15034 1052 aa22.74■■□□□ 1.23
TUBB4B-202ENST00000604929 C2CD5Q86YS7 1000 aa22.74■■□□□ 1.23
TUBB4B-202ENST00000604929 SDR42E1Q8WUS8 393 aa22.74■■□□□ 1.23
TUBB4B-202ENST00000604929 INCENPQ9NQS7 918 aa22.74■■□□□ 1.23
TUBB4B-202ENST00000604929 NRXN2Q9P2S2 1712 aa22.74■■□□□ 1.23
TUBB4B-202ENST00000604929 C15orf52Q6ZUT6 534 aaKnown RBP22.74■■□□□ 1.23
TUBB4B-202ENST00000604929 SMC3Q9UQE7 1217 aa22.74■■□□□ 1.23
TUBB4B-202ENST00000604929 PDS5AQ29RF7 1337 aaKnown RBP22.73■■□□□ 1.23
TUBB4B-202ENST00000604929 GNAT2P19087 354 aa22.73■■□□□ 1.23
TUBB4B-202ENST00000604929 TMC4Q7Z404 712 aa22.73■■□□□ 1.23
TUBB4B-202ENST00000604929 TBC1D10CQ8IV04 446 aa22.73■■□□□ 1.23
TUBB4B-202ENST00000604929 H0YIN7 160 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 CHRNA5P30532 468 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 TDO2P48775 406 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 ALX1Q15699 326 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 STK11IPQ8N1F8 1099 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 NCOA7Q8NI08 942 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 RIOK1Q9BRS2 568 aaKnown RBP22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 LAMA4Q16363 1823 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 CTDSPL2Q05D32 466 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 APOBRQ0VD83 1088 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 NKX2-3Q8TAU0 364 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 NACAP1Q9BZK3 213 aa22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 GPHNQ9NQX3 736 aaPredicted RBP22.72■■□□□ 1.23
TUBB4B-202ENST00000604929 MYH13Q9UKX3 1938 aa22.71■■□□□ 1.23
TUBB4B-202ENST00000604929 GRIK5Q16478 980 aa22.71■■□□□ 1.23
TUBB4B-202ENST00000604929 RALYLQ86SE5 291 aaKnown RBP22.71■■□□□ 1.23
TUBB4B-202ENST00000604929 MPNDQ8N594 471 aa22.71■■□□□ 1.23
TUBB4B-202ENST00000604929 WDR66Q8TBY9 1149 aa22.71■■□□□ 1.23
TUBB4B-202ENST00000604929 AATFQ9NY61 560 aaKnown RBP eCLIP22.71■■□□□ 1.239e-8■■□□□ 12.9
TUBB4B-202ENST00000604929 ZNF219Q9P2Y4 722 aaPredicted RBP22.71■■□□□ 1.23
TUBB4B-202ENST00000604929 GJB2P29033 226 aa22.7■■□□□ 1.23
TUBB4B-202ENST00000604929 TRDNQ13061 729 aa22.7■■□□□ 1.23
TUBB4B-202ENST00000604929 DZIP1Q86YF9 867 aaKnown RBP22.7■■□□□ 1.23
TUBB4B-202ENST00000604929 GBP4Q96PP9 640 aa22.7■■□□□ 1.23
TUBB4B-202ENST00000604929 NAP1L2Q9ULW6 460 aaPredicted RBP22.7■■□□□ 1.23
TUBB4B-202ENST00000604929 CACNA1SQ13698 1873 aa22.7■■□□□ 1.22
TUBB4B-202ENST00000604929 LDHBP07195 334 aaKnown RBP22.7■■□□□ 1.22
TUBB4B-202ENST00000604929 SPTY2D1Q68D10 685 aaPredicted RBP22.7■■□□□ 1.22
TUBB4B-202ENST00000604929 TMX4Q9H1E5 349 aaPredicted RBP22.7■■□□□ 1.22
TUBB4B-202ENST00000604929 PRC1O43663 620 aa22.69■■□□□ 1.22
TUBB4B-202ENST00000604929 MCM5P33992 734 aa22.69■■□□□ 1.22
TUBB4B-202ENST00000604929 DPP8Q6V1X1 898 aaPredicted RBP22.69■■□□□ 1.22
TUBB4B-202ENST00000604929 MB21D2Q8IYB1 491 aaPredicted RBP22.69■■□□□ 1.22
TUBB4B-202ENST00000604929 IL1R1P14778 569 aa22.69■■□□□ 1.22
TUBB4B-202ENST00000604929 CHAMP1Q96JM3 812 aa22.69■■□□□ 1.22
TUBB4B-202ENST00000604929 MINDY4BA8MYZ0 360 aa22.68■■□□□ 1.22
TUBB4B-202ENST00000604929 BAG4O95429 457 aaKnown RBP22.68■■□□□ 1.22
TUBB4B-202ENST00000604929 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
TUBB4B-202ENST00000604929 B4E1Z4 1266 aa22.67■■□□□ 1.22
TUBB4B-202ENST00000604929 BRD1O95696 1058 aa22.67■■□□□ 1.22
TUBB4B-202ENST00000604929 ANTXR2P58335 489 aa22.67■■□□□ 1.22
TUBB4B-202ENST00000604929 AGXT2Q9BYV1 514 aa22.67■■□□□ 1.22
TUBB4B-202ENST00000604929 TACC3Q9Y6A5 838 aa22.67■■□□□ 1.22
TUBB4B-202ENST00000604929 DIXDC1Q155Q3 683 aa22.67■■□□□ 1.22
TUBB4B-202ENST00000604929 SALL1Q9NSC2 1324 aa22.67■■□□□ 1.22
TUBB4B-202ENST00000604929 SMIM22K7EJ46 135 aa22.66■■□□□ 1.22
TUBB4B-202ENST00000604929 SYT1P21579 422 aa22.66■■□□□ 1.22
TUBB4B-202ENST00000604929 CCT2P78371 535 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms