RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SH2B1Q9NRF2 756 aaPredicted RBP14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 SUGT1Q9Y2Z0 365 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 BAZ2AQ9UIF9 1905 aaKnown RBP14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 FAM205AQ6ZU69 1335 aa14.64□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 PATL2C9JE40 543 aaKnown RBP14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 FOXP2O15409 715 aa14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 SLC4A3P48751 1232 aa14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 NT5C2P49902 561 aa14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 GIMAP6Q6P9H5 292 aa14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 MPNDQ8N594 471 aa14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 RTFDC1Q9BY42 306 aaPredicted RBP14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 CD209Q9NNX6 404 aa14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 DDX60LQ5H9U9 1706 aaKnown RBP14.63□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 ARFGEF1Q9Y6D6 1849 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 CHGBP05060 677 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 RPS6KB1P23443 525 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 GSTO1P78417 241 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 FER1L6Q2WGJ9 1857 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 ADCK5Q3MIX3 580 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 TXNRD3Q86VQ6 643 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 NSUN4Q96CB9 384 aaKnown RBP14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 NEK1Q96PY6 1258 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 UPF3BQ9BZI7 483 aaKnown RBP14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 NACAP1Q9BZK3 213 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 CHMP5Q9NZZ3 219 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 POLLQ9UGP5 575 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 LIMCH1Q9UPQ0 1083 aa14.62□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 WTIPA6NIX2 430 aaPredicted RBP14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 FGAP02671 866 aa14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 NAA16Q6N069 864 aaPredicted RBP14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 DPP8Q6V1X1 898 aaPredicted RBP14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 SUPT20HQ8NEM7 779 aa14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 TMX3Q96JJ7 454 aa14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 MTFR1LQ9H019 292 aa14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 PDRG1Q9NUG6 133 aa14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 RAI14Q9P0K7 980 aa14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 ABCF2Q9UG63 623 aa14.61□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 MAGEB6P1A0A0J9YX57 407 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 MBD4O95243 580 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 LDHCP07864 332 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 PCP11498 1178 aaKnown RBP14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 PDIA4P13667 645 aaKnown RBP14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 CYP7A1P22680 504 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 FKBP1AP62942 108 aaKnown RBP14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 SLFNL1Q499Z3 407 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 ILDR1Q86SU0 546 aaPredicted RBP14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 SLF2Q8IX21 1173 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 C7orf43Q8WVR3 580 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 CHMP4CQ96CF2 233 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 RIOK1Q9BRS2 568 aaKnown RBP14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 MTA3Q9BTC8 594 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 VPS33BQ9H267 617 aa14.6□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 MYH1P12882 1939 aa14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 C6orf229H3BNL8 230 aa14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 ZNF213O14771 459 aa14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 LDHBP07195 334 aaKnown RBP14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 AK2P54819 239 aa14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 TGFB2P61812 414 aa14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 MECOMQ03112 1051 aa14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 SOGA3Q5TF21 947 aa14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 DHX32Q7L7V1 743 aaKnown RBP14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 ZNF622Q969S3 477 aaKnown RBP eCLIP14.59□□□□□ -0.071e-16■□□□□ 9.9
NEDD8-MDP1-203ENST00000604306 ZC3H12CQ9C0D7 883 aaKnown RBP14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 IQSEC3Q9UPP2 1182 aaPredicted RBP14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 SCN9AQ15858 1988 aa14.59□□□□□ -0.07
NEDD8-MDP1-203ENST00000604306 GSG1L2A8MUP6 293 aa14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 E7EWF7 191 aa14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 POLD1P28340 1107 aa14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 PODNQ7Z5L7 613 aa14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 DZIP1Q86YF9 867 aaKnown RBP14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 IFNL3Q8IZI9 196 aa14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 FAM163AQ96GL9 167 aaPredicted RBP14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 CNNM2Q9H8M5 875 aa14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 ANAPC4Q9UJX5 808 aa14.58□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 MYH8P13535 1937 aa14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 PPP4CP60510 307 aa14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 NUCB2P80303 420 aa14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 EXOSC10Q01780 885 aaKnown RBP14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 LCORLQ8N3X6 602 aa14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 NCOA7Q8NI08 942 aa14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 ZNF384Q8TF68 577 aa14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 NAPBQ9H115 298 aa14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 SLKQ9H2G2 1235 aaPredicted RBP14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 ATP8A2Q9NTI2 1148 aa14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.57□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 BAG3O95817 575 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 PLCG2P16885 1265 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 PRDX5P30044 214 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 EVCP57679 992 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 TRDNQ13061 729 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 CHAF1AQ13111 956 aaPredicted RBP14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 STOX1Q6ZVD7 989 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 RTKN2Q8IZC4 609 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 TTLL6Q8N841 843 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 UPF1Q92900 1129 aaKnown RBP eCLIP14.56□□□□□ -0.083e-7■□□□□ 10.1
NEDD8-MDP1-203ENST00000604306 PSMD1Q99460 953 aa14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 CRNKL1Q9BZJ0 848 aaKnown RBP14.56□□□□□ -0.08
NEDD8-MDP1-203ENST00000604306 RNF41Q9H4P4 317 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms