RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CCDC70Q6NSX1 233 aa10.09□□□□□ -0.79
COMMD3-215ENST00000602574 GIMAP1Q8WWP7 306 aa10.09□□□□□ -0.79
COMMD3-215ENST00000602574 RSPH1Q8WYR4 309 aa10.09□□□□□ -0.79
COMMD3-215ENST00000602574 PAGR1Q9BTK6 254 aa10.09□□□□□ -0.79
COMMD3-215ENST00000602574 NRDE2Q9H7Z3 1164 aa10.09□□□□□ -0.79
COMMD3-215ENST00000602574 SLC39A2Q9NP94 309 aa10.09□□□□□ -0.79
COMMD3-215ENST00000602574 ZNF644Q9H582 1327 aaPredicted RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 ZC3H4Q9UPT8 1303 aaKnown RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 TMEM232C9JQI7 657 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 CD2BP2O95400 341 aaKnown RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 HCLS1P14317 486 aaPredicted RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 GBP2P32456 591 aaPredicted RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 IFFO1Q0D2I5 559 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 BTG3Q14201 252 aaPredicted RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 TMCO4Q5TGY1 634 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 LARP1BQ659C4 914 aaKnown RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 MORC4Q8TE76 937 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 ZWILCHQ9H900 591 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 SENP2Q9HC62 589 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 TMED5Q9Y3A6 229 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 M0R2C6 588 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 TRIM37O94972 964 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 AMPHP49418 695 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 CUL4BQ13620 913 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 DHX8Q14562 1220 aaKnown RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 RSPH3Q86UC2 560 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 PEX5LQ8IYB4 626 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 ANKK1Q8NFD2 765 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 RABL2AQ9UBK7 228 aaPredicted RBP10.08□□□□□ -0.8
COMMD3-215ENST00000602574 ZDHHC9Q9Y397 364 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 UNC13BO14795 1591 aa10.08□□□□□ -0.8
COMMD3-215ENST00000602574 MYO5CQ9NQX4 1742 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
COMMD3-215ENST00000602574 SYNJ2O15056 1496 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 CYP27B1O15528 508 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 AP5Z1O43299 807 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 MSL3P1P0C860 447 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 TRIM21P19474 475 aaKnown RBP10.07□□□□□ -0.8
COMMD3-215ENST00000602574 SYT1P21579 422 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 ABL2P42684 1182 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 SNCBQ16143 134 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 KIF4BQ2VIQ3 1234 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 OLFML1Q6UWY5 402 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 SAPCD2Q86UD0 394 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 TTC30AQ86WT1 665 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 PLA2G4DQ86XP0 818 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 CCAR2Q8N163 923 aaKnown RBP10.07□□□□□ -0.8
COMMD3-215ENST00000602574 CNNM3Q8NE01 707 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 DHTKD1Q96HY7 919 aaPredicted RBP10.07□□□□□ -0.8
COMMD3-215ENST00000602574 MTRQ99707 1265 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 TUBGCP4Q9UGJ1 667 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 DDX25Q9UHL0 483 aaKnown RBP10.07□□□□□ -0.8
COMMD3-215ENST00000602574 DNAI1Q9UI46 699 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 CAPN7Q9Y6W3 813 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 ABLIM1O14639 778 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 SEC31AO94979 1220 aaKnown RBP10.07□□□□□ -0.8
COMMD3-215ENST00000602574 MCM3P25205 808 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 FAAH2Q6GMR7 532 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 B4GALNT4Q76KP1 1039 aa10.07□□□□□ -0.8
COMMD3-215ENST00000602574 DUSP9Q99956 384 aaKnown RBP10.07□□□□□ -0.8
COMMD3-215ENST00000602574 METTL14Q9HCE5 456 aaKnown RBP10.07□□□□□ -0.8
COMMD3-215ENST00000602574 SH3BP5O60239 455 aa10.06□□□□□ -0.8
COMMD3-215ENST00000602574 SKAP2O75563 359 aaPredicted RBP10.06□□□□□ -0.8
COMMD3-215ENST00000602574 NEK2P51955 445 aa10.06□□□□□ -0.8
COMMD3-215ENST00000602574 HDXQ7Z353 690 aa10.06□□□□□ -0.8
COMMD3-215ENST00000602574 LCA5Q86VQ0 697 aa10.06□□□□□ -0.8
COMMD3-215ENST00000602574 ACSBG1Q96GR2 724 aa10.06□□□□□ -0.8
COMMD3-215ENST00000602574 SH3GL1Q99961 368 aa10.06□□□□□ -0.8
COMMD3-215ENST00000602574 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.06□□□□□ -0.8
COMMD3-215ENST00000602574 MAST1Q9Y2H9 1570 aa10.06□□□□□ -0.8
COMMD3-215ENST00000602574 NUP153P49790 1475 aaKnown RBP10.06□□□□□ -0.8
COMMD3-215ENST00000602574 GRIN2AQ12879 1464 aa10.06□□□□□ -0.8
COMMD3-215ENST00000602574 GPATCH8Q9UKJ3 1502 aaKnown RBP10.06□□□□□ -0.8
COMMD3-215ENST00000602574 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
COMMD3-215ENST00000602574 A6NNZ2 444 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 ANKRD65E5RJM6 399 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 BBOX1O75936 387 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 MBD4O95243 580 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 CAVIN2O95810 425 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 TUBB4BP68371 445 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 PDE4BQ07343 736 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 EIF2B5Q13144 721 aaKnown RBP10.05□□□□□ -0.8
COMMD3-215ENST00000602574 PKD2Q13563 968 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 TUBB8Q3ZCM7 444 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 PARP10Q53GL7 1025 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 TMC6Q7Z403 805 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 RABGGTAQ92696 567 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 PPP2R3CQ969Q6 453 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 TSC22D3Q99576 134 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 PCDH18Q9HCL0 1135 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 GGA2Q9UJY4 613 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 CROTQ9UKG9 612 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 TRPC6Q9Y210 931 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 ATP6V0A2Q9Y487 856 aa10.05□□□□□ -0.8
COMMD3-215ENST00000602574 IQGAP1P46940 1657 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 257.3 ms