RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 SLC52A2Q9HAB3 445 aa20.77■□□□□ 0.92
SPC24-206ENST00000592540 HNRNPH2P55795 449 aaKnown RBP20.76■□□□□ 0.91
SPC24-206ENST00000592540 MYL5Q02045 173 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 CCDC158Q5M9N0 1113 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 TEX35Q5T0J7 233 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 FCHSD1Q86WN1 690 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 VSTM4Q8IW00 320 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 HPS5Q9UPZ3 1129 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 TULP2O00295 520 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 ATP8B1O43520 1251 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 KIF23Q02241 960 aaPredicted RBP20.76■□□□□ 0.91
SPC24-206ENST00000592540 CFAP100Q494V2 611 aa20.76■□□□□ 0.91
SPC24-206ENST00000592540 ZNF496Q96IT1 587 aaPredicted RBP20.76■□□□□ 0.91
SPC24-206ENST00000592540 SPEF2Q9C093 1822 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
SPC24-206ENST00000592540 SLIT3O75094 1523 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 KLF18A0A0U1RQI7 1052 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 ZSCAN12O43309 604 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 SEC31AO94979 1220 aaKnown RBP20.75■□□□□ 0.91
SPC24-206ENST00000592540 SYKP43405 635 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 SLC39A14Q15043 492 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 ESCO1Q5FWF5 840 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 GPR108Q9NPR9 543 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 KIF13AQ9H1H9 1805 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 GOLGA8BA8MQT2 603 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 IFIT1P09914 478 aaKnown RBP20.75■□□□□ 0.91
SPC24-206ENST00000592540 MARCKSP29966 332 aaPredicted RBP20.75■□□□□ 0.91
SPC24-206ENST00000592540 GOLGA8FQ08AF8 430 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 GOLGA8DPQ0D2H9 430 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 NFATC2IPQ8NCF5 419 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 UBXN6Q9BZV1 441 aa20.75■□□□□ 0.91
SPC24-206ENST00000592540 VWA3AA6NCI4 1184 aa20.74■□□□□ 0.91
SPC24-206ENST00000592540 POLR3GO15318 223 aaPredicted RBP20.74■□□□□ 0.91
SPC24-206ENST00000592540 RGPD5Q99666 1765 aa20.74■□□□□ 0.91
SPC24-206ENST00000592540 C4AP0C0L4 1744 aa20.74■□□□□ 0.91
SPC24-206ENST00000592540 C4BP0C0L5 1744 aa20.74■□□□□ 0.91
SPC24-206ENST00000592540 KDM6AO15550 1401 aaPredicted RBP20.74■□□□□ 0.91
SPC24-206ENST00000592540 PRC1O43663 620 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 TOP1P11387 765 aaKnown RBP20.73■□□□□ 0.91
SPC24-206ENST00000592540 HAND2P61296 217 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 FOXO4P98177 505 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 TMEM139Q8IV31 216 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 AXIN2Q9Y2T1 843 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 PPP2R2CQ9Y2T4 447 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 TMEM232C9JQI7 657 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 CPLX1O14810 134 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 ARHGAP6O43182 974 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 RAB11FIP4Q86YS3 637 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 OSBP2Q969R2 916 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 MPHOSPH8Q99549 860 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 HPSEQ9Y251 543 aa20.73■□□□□ 0.91
SPC24-206ENST00000592540 TBC1D8O95759 1140 aa20.72■□□□□ 0.91
SPC24-206ENST00000592540 CDK11BP21127 795 aaKnown RBP20.72■□□□□ 0.91
SPC24-206ENST00000592540 PNOCQ13519 176 aa20.72■□□□□ 0.91
SPC24-206ENST00000592540 MB21D2Q8IYB1 491 aaPredicted RBP20.72■□□□□ 0.91
SPC24-206ENST00000592540 SNRPA1P09661 255 aaKnown RBP20.72■□□□□ 0.91
SPC24-206ENST00000592540 PTPN21Q16825 1174 aa20.72■□□□□ 0.91
SPC24-206ENST00000592540 IMMTQ16891 758 aaKnown RBP20.72■□□□□ 0.91
SPC24-206ENST00000592540 EPC1Q9H2F5 836 aa20.72■□□□□ 0.91
SPC24-206ENST00000592540 FOXP2O15409 715 aa20.71■□□□□ 0.91
SPC24-206ENST00000592540 SASH3O75995 380 aa20.71■□□□□ 0.91
SPC24-206ENST00000592540 CAPN2P17655 700 aa20.71■□□□□ 0.91
SPC24-206ENST00000592540 CC2D1AQ6P1N0 951 aaPredicted RBP20.71■□□□□ 0.91
SPC24-206ENST00000592540 FAM177A1Q8N128 213 aaPredicted RBP20.71■□□□□ 0.91
SPC24-206ENST00000592540 MYO1BO43795 1136 aa20.71■□□□□ 0.91
SPC24-206ENST00000592540 IL15P40933 162 aaPredicted RBP20.71■□□□□ 0.91
SPC24-206ENST00000592540 MAP3K9P80192 1104 aa20.71■□□□□ 0.91
SPC24-206ENST00000592540 SHC4Q6S5L8 630 aa20.71■□□□□ 0.91
SPC24-206ENST00000592540 FANCLQ9NW38 375 aa20.71■□□□□ 0.91
SPC24-206ENST00000592540 CASQ1P31415 396 aa20.7■□□□□ 0.9
SPC24-206ENST00000592540 ANTXR2P58335 489 aa20.7■□□□□ 0.9
SPC24-206ENST00000592540 OLFM4Q6UX06 510 aa20.7■□□□□ 0.9
SPC24-206ENST00000592540 GPR161Q8N6U8 529 aaKnown RBP20.7■□□□□ 0.9
SPC24-206ENST00000592540 RBM33Q96EV2 1170 aaKnown RBP20.7■□□□□ 0.9
SPC24-206ENST00000592540 PPP6R2O75170 966 aa20.7■□□□□ 0.9
SPC24-206ENST00000592540 TXLNBQ8N3L3 684 aa20.7■□□□□ 0.9
SPC24-206ENST00000592540 NEK11Q8NG66 645 aa20.7■□□□□ 0.9
SPC24-206ENST00000592540 WDR24Q96S15 920 aa20.7■□□□□ 0.9
SPC24-206ENST00000592540 INTS13Q9NVM9 706 aa20.7■□□□□ 0.9
SPC24-206ENST00000592540 FAM237AA0A1B0GTK4 181 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 GOLGA6L9A6NEM1 432 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 H7C1W4 665 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 FGAP02671 866 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 OAS2P29728 719 aaKnown RBP20.69■□□□□ 0.9
SPC24-206ENST00000592540 GNG11P61952 73 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 ST5P78524 1137 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 JMYQ8N9B5 988 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 RGS22Q8NE09 1264 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 MRFAP1Q9Y605 127 aa20.69■□□□□ 0.9
SPC24-206ENST00000592540 A0A1B0GUL7 405 aa20.68■□□□□ 0.9
SPC24-206ENST00000592540 SLC20A2Q08357 652 aa20.68■□□□□ 0.9
SPC24-206ENST00000592540 TBX2Q13207 712 aaPredicted RBP20.68■□□□□ 0.9
SPC24-206ENST00000592540 PTPAQ15257 358 aa20.68■□□□□ 0.9
SPC24-206ENST00000592540 LRRC24Q50LG9 513 aa20.68■□□□□ 0.9
SPC24-206ENST00000592540 RSRC2Q7L4I2 434 aaKnown RBP20.68■□□□□ 0.9
SPC24-206ENST00000592540 NCOA7Q8NI08 942 aa20.68■□□□□ 0.9
SPC24-206ENST00000592540 SMARCE1Q969G3 411 aa20.68■□□□□ 0.9
SPC24-206ENST00000592540 BAG1Q99933 345 aaPredicted RBP20.68■□□□□ 0.9
SPC24-206ENST00000592540 ZCCHC17Q9NP64 241 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms