RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CMA1P23946 247 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 ZAP70P43403 619 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 STK38Q15208 465 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 GPAA1O43292 621 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 SKILP12757 684 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 WASHC4Q2M389 1173 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 UTP14CQ5TAP6 766 aaKnown RBP13.5□□□□□ -0.25
ZNF540-210ENST00000592533 CEP135Q66GS9 1140 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
ZNF540-210ENST00000592533 NAP1L2Q9ULW6 460 aaPredicted RBP13.5□□□□□ -0.25
ZNF540-210ENST00000592533 NHSL1Q5SYE7 1610 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 A0A1B0GVL5 298 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 GORABQ5T7V8 394 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 CCDC112Q8NEF3 446 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 FEZ1Q99689 392 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 SDF4Q9BRK5 362 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.49□□□□□ -0.25
ZNF540-210ENST00000592533 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 ZNF213O14771 459 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 ADD2P35612 726 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 IFIT5Q13325 482 aaKnown RBP13.49□□□□□ -0.25
ZNF540-210ENST00000592533 ANO1Q5XXA6 986 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 TOM1L2Q6ZVM7 507 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 RALYLQ86SE5 291 aaKnown RBP13.49□□□□□ -0.25
ZNF540-210ENST00000592533 BCORQ6W2J9 1755 aa13.49□□□□□ -0.25
ZNF540-210ENST00000592533 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
ZNF540-210ENST00000592533 KIF28PB7ZC32 967 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 KIF2AO00139 706 aaPredicted RBP13.48□□□□□ -0.25
ZNF540-210ENST00000592533 NLRP12P59046 1061 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 HAND2P61296 217 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 ATP2B3Q16720 1220 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 CCAR2Q8N163 923 aaKnown RBP13.48□□□□□ -0.25
ZNF540-210ENST00000592533 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 SLC39A14Q15043 492 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 TTF1Q15361 905 aaPredicted RBP13.48□□□□□ -0.25
ZNF540-210ENST00000592533 UBE3CQ15386 1083 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 PRDM11Q9NQV5 511 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 NID2Q14112 1375 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 IKBKBO14920 756 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 ZNF202O95125 648 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 MCAMP43121 646 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 CCDC150Q8NCX0 1101 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 PKNOX2Q96KN3 472 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
ZNF540-210ENST00000592533 HPSEQ9Y251 543 aa13.48□□□□□ -0.25
ZNF540-210ENST00000592533 SOS2Q07890 1332 aaPredicted RBP13.47□□□□□ -0.25
ZNF540-210ENST00000592533 USP27XA6NNY8 438 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 CPLX1O14810 134 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 PPP6R2O75170 966 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 CDKL5O76039 1030 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 NCAPHQ15003 741 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 SF3A1Q15459 793 aaKnown RBP13.47□□□□□ -0.25
ZNF540-210ENST00000592533 OTUD7BQ6GQQ9 843 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 MAP3K15Q6ZN16 1313 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
ZNF540-210ENST00000592533 SLC3A2P08195 630 aaKnown RBP13.47□□□□□ -0.25
ZNF540-210ENST00000592533 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
ZNF540-210ENST00000592533 PTPN14Q15678 1187 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 GIGYF2Q6Y7W6 1299 aaKnown RBP13.47□□□□□ -0.25
ZNF540-210ENST00000592533 SYNE3Q6ZMZ3 975 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 BRINP3Q76B58 766 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 CGNQ9P2M7 1197 aaKnown RBP13.47□□□□□ -0.25
ZNF540-210ENST00000592533 TUBE1Q9UJT0 475 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 MROH7-TTC4A0A0A0MT08 1334 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
ZNF540-210ENST00000592533 A0A087WWV3 80 aa13.46□□□□□ -0.25
ZNF540-210ENST00000592533 POLR3DP05423 398 aaPredicted RBP13.46□□□□□ -0.25
ZNF540-210ENST00000592533 PFKFB1P16118 471 aa13.46□□□□□ -0.25
ZNF540-210ENST00000592533 DMTNQ08495 405 aa13.46□□□□□ -0.25
ZNF540-210ENST00000592533 ALX1Q15699 326 aa13.46□□□□□ -0.25
ZNF540-210ENST00000592533 PPFIA3O75145 1194 aa13.46□□□□□ -0.25
ZNF540-210ENST00000592533 ARID4AP29374 1257 aaPredicted RBP13.46□□□□□ -0.25
ZNF540-210ENST00000592533 LAMB2P55268 1798 aa13.46□□□□□ -0.26
ZNF540-210ENST00000592533 TUBB4AP04350 444 aa13.46□□□□□ -0.26
ZNF540-210ENST00000592533 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.26
ZNF540-210ENST00000592533 ELOA2Q8IYF1 753 aaPredicted RBP13.46□□□□□ -0.26
ZNF540-210ENST00000592533 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.26
ZNF540-210ENST00000592533 FAM89AQ96GI7 184 aa13.46□□□□□ -0.26
ZNF540-210ENST00000592533 TMEM87BQ96K49 555 aa13.46□□□□□ -0.26
ZNF540-210ENST00000592533 STK36Q9NRP7 1315 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 PSDA5PKW4 1024 aaPredicted RBP13.45□□□□□ -0.26
ZNF540-210ENST00000592533 MYO1BO43795 1136 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 U2AF2P26368 475 aaKnown RBP eCLIP13.45□□□□□ -0.26
ZNF540-210ENST00000592533 PTPAQ15257 358 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 SGMS1Q86VZ5 419 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 ERCC4Q92889 916 aaPredicted RBP13.45□□□□□ -0.26
ZNF540-210ENST00000592533 WNK3Q9BYP7 1800 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 TCRBV5S4A2TA0A5A2 114 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 WDHD1O75717 1129 aaPredicted RBP13.45□□□□□ -0.26
ZNF540-210ENST00000592533 TPM4P67936 248 aa13.45□□□□□ -0.26
ZNF540-210ENST00000592533 TRDNQ13061 729 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms