RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 NKX2-3Q8TAU0 364 aa18.51■□□□□ 0.55
MBD1-227ENST00000592060 PGBD1Q96JS3 809 aa18.51■□□□□ 0.55
MBD1-227ENST00000592060 ECM29Q5VYK3 1845 aa18.51■□□□□ 0.55
MBD1-227ENST00000592060 BCAMP50895 628 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 MAP3K12Q12852 859 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 SF3B3Q15393 1217 aaKnown RBP18.5■□□□□ 0.55
MBD1-227ENST00000592060 MAGEB6Q8N7X4 407 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 AIDAQ96BJ3 306 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 CDC5LQ99459 802 aaKnown RBP18.5■□□□□ 0.55
MBD1-227ENST00000592060 EPB41L4AQ9HCS5 686 aaPredicted RBP18.5■□□□□ 0.55
MBD1-227ENST00000592060 DENND2AQ9ULE3 1009 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 TAF1LQ8IZX4 1826 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 GOLGA8BA8MQT2 603 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 FOSBP53539 338 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
MBD1-227ENST00000592060 NGLY1Q96IV0 654 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 BCL2L12Q9HB09 334 aa18.5■□□□□ 0.55
MBD1-227ENST00000592060 LY75O60449 1722 aa18.49■□□□□ 0.55
MBD1-227ENST00000592060 MBD4O95243 580 aa18.49■□□□□ 0.55
MBD1-227ENST00000592060 KCNQ4P56696 695 aa18.49■□□□□ 0.55
MBD1-227ENST00000592060 CYB5R4Q7L1T6 521 aa18.49■□□□□ 0.55
MBD1-227ENST00000592060 ZSCAN30Q86W11 494 aa18.49■□□□□ 0.55
MBD1-227ENST00000592060 ZNF804BA4D1E1 1349 aa18.49■□□□□ 0.55
MBD1-227ENST00000592060 NUP62CLQ9H1M0 184 aa18.48■□□□□ 0.55
MBD1-227ENST00000592060 CFAP45Q9UL16 551 aa18.48■□□□□ 0.55
MBD1-227ENST00000592060 COL1A1P02452 1464 aaPredicted RBP18.48■□□□□ 0.55
MBD1-227ENST00000592060 PATL2C9JE40 543 aaKnown RBP18.48■□□□□ 0.55
MBD1-227ENST00000592060 SH2B2O14492 632 aaPredicted RBP18.48■□□□□ 0.55
MBD1-227ENST00000592060 APPP05067 770 aa18.48■□□□□ 0.55
MBD1-227ENST00000592060 TRDNQ13061 729 aa18.48■□□□□ 0.55
MBD1-227ENST00000592060 RC3H1Q5TC82 1133 aaKnown RBP18.48■□□□□ 0.55
MBD1-227ENST00000592060 NEDD4P46934 1319 aa18.47■□□□□ 0.55
MBD1-227ENST00000592060 SLC10A5Q5PT55 438 aa18.47■□□□□ 0.55
MBD1-227ENST00000592060 IFNL3Q8IZI9 196 aa18.47■□□□□ 0.55
MBD1-227ENST00000592060 DDX19AQ9NUU7 478 aaKnown RBP18.47■□□□□ 0.55
MBD1-227ENST00000592060 ANGEL1Q9UNK9 670 aaKnown RBP18.47■□□□□ 0.55
MBD1-227ENST00000592060 PNPLA7Q6ZV29 1317 aa18.47■□□□□ 0.55
MBD1-227ENST00000592060 CACNA1SQ13698 1873 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 DHX16O60231 1041 aaKnown RBP18.46■□□□□ 0.55
MBD1-227ENST00000592060 PPFIA3O75145 1194 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 TBC1D9BQ66K14 1250 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 ATL3Q6DD88 541 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 RBM43Q6ZSC3 357 aaKnown RBP18.46■□□□□ 0.55
MBD1-227ENST00000592060 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 ARMT1Q9H993 441 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 DACT1Q9NYF0 836 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 RCOR1Q9UKL0 485 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 SBF2Q86WG5 1849 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 GOLGA6L4A6NEF3 574 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 GSG1L2A8MUP6 293 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 GUCY1B3Q02153 619 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 MAP3K11Q16584 847 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 CLSTN2Q9H4D0 955 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 NARFQ9UHQ1 456 aa18.46■□□□□ 0.55
MBD1-227ENST00000592060 B4E1Z4 1266 aa18.45■□□□□ 0.54
MBD1-227ENST00000592060 RPS6KA4O75676 772 aa18.45■□□□□ 0.54
MBD1-227ENST00000592060 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
MBD1-227ENST00000592060 BSDC1Q9NW68 430 aaPredicted RBP18.45■□□□□ 0.54
MBD1-227ENST00000592060 TACC3Q9Y6A5 838 aa18.45■□□□□ 0.54
MBD1-227ENST00000592060 UBE4AQ14139 1066 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 RAB11FIP4Q86YS3 637 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 LCORLQ8N3X6 602 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 TMEM87BQ96K49 555 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 USP28Q96RU2 1077 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 FTOQ9C0B1 505 aaKnown RBP eCLIP18.44■□□□□ 0.54
MBD1-227ENST00000592060 NAPBQ9H115 298 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 MYH13Q9UKX3 1938 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 CCDC192P0DO97 292 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 GNAT2P19087 354 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 BICD2Q8TD16 824 aa18.44■□□□□ 0.54
MBD1-227ENST00000592060 ZNF396Q96N95 335 aaPredicted RBP18.44■□□□□ 0.54
MBD1-227ENST00000592060 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.44■□□□□ 0.54
MBD1-227ENST00000592060 ORC3Q9UBD5 711 aaPredicted RBP18.44■□□□□ 0.54
MBD1-227ENST00000592060 NOL7Q9UMY1 257 aaKnown RBP18.44■□□□□ 0.54
MBD1-227ENST00000592060 NR1I2O75469 434 aa18.43■□□□□ 0.54
MBD1-227ENST00000592060 RGS22Q8NE09 1264 aa18.43■□□□□ 0.54
MBD1-227ENST00000592060 IGDCC4Q8TDY8 1250 aa18.43■□□□□ 0.54
MBD1-227ENST00000592060 CCDC39Q9UFE4 941 aa18.43■□□□□ 0.54
MBD1-227ENST00000592060 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
MBD1-227ENST00000592060 PRKAB2O43741 272 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 APOA5Q6Q788 366 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 BICDL1Q6ZP65 573 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 C8orf76Q96K31 380 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 TNMDQ9H2S6 317 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 LY9Q9HBG7 655 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 SENP2Q9HC62 589 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 USP25Q9UHP3 1055 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 MINPP1Q9UNW1 487 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 TNRC6CQ9HCJ0 1690 aaKnown RBP18.42■□□□□ 0.54
MBD1-227ENST00000592060 GYG1P46976 350 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 CEBPZQ03701 1054 aaKnown RBP18.42■□□□□ 0.54
MBD1-227ENST00000592060 CTDSPL2Q05D32 466 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 TYRO3Q06418 890 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 CAMK4Q16566 473 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 SGMS1Q86VZ5 419 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 FBXO18Q8NFZ0 1043 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
MBD1-227ENST00000592060 NYXQ9GZU5 481 aa18.42■□□□□ 0.54
MBD1-227ENST00000592060 USP21Q9UK80 565 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms