RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 CTAGE5O15320 804 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 ATP1A3P13637 1013 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 GPS2Q13227 327 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 ERCC6LQ2NKX8 1250 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 NOC3LQ8WTT2 800 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 DESI2Q9BSY9 194 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 GREM2Q9H772 168 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 OGFRQ9NZT2 677 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 SIGLEC1Q9BZZ2 1709 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 SMTNL1A8MU46 457 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 PHACTR2O75167 634 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 USP5P45974 858 aa15.82■□□□□ 0.12
CACNA1A-209ENST00000587525 ZNF532Q9HCE3 1301 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 XBP1P17861 261 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 CLEC17AQ6ZS10 378 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 PUF60Q9UHX1 559 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 PHKA1P46020 1223 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 ADKP55263 362 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 GOLGA6L1Q8N7Z2 621 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 SDR42E1Q8WUS8 393 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 HAUS7Q99871 368 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 KCNF1Q9H3M0 494 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 GOLPH3LQ9H4A5 285 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 UBE2Q2LH0YL09 131 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 POLR2DO15514 142 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 LMAN1P49257 510 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 WTAPQ15007 396 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 ANO1Q5XXA6 986 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 KRT40Q6A162 431 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 DZIP3Q86Y13 1208 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 TIGD1Q96MW7 591 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 BTG4Q9NY30 223 aa15.81■□□□□ 0.12
CACNA1A-209ENST00000587525 PRKAB2O43741 272 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 CCT6AP40227 531 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 ZNF174Q15697 407 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 KIF4BQ2VIQ3 1234 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 CEP170BQ9Y4F5 1589 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 BTBD18B2RXH4 712 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 IL2RBP14784 551 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 ERBB3P21860 1342 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 CAGE1Q8TC20 777 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 KCNG4Q8TDN1 519 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 CCDC12Q8WUD4 166 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 COPRSQ9NQ92 184 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 STX8Q9UNK0 236 aa15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 NIP7Q9Y221 180 aaKnown RBP eCLIP15.8■□□□□ 0.12
CACNA1A-209ENST00000587525 PLEKHG1Q9ULL1 1385 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 CASP1P29466 404 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 MCM6Q14566 821 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 C10orf67Q8IYJ2 551 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 ANKRD20A12PQ8NF67 263 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 RTN1Q16799 776 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 SHPRHQ149N8 1683 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 EXOC5O00471 708 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 IPO7O95373 1038 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 PFKFB1P16118 471 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 MYSM1Q5VVJ2 828 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 DRC1Q96MC2 740 aa15.79■□□□□ 0.12
CACNA1A-209ENST00000587525 KIF20AO95235 890 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 SLC5A1P13866 664 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 NLRP5P59047 1200 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 ST3GAL1Q11201 340 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 CCDC102AQ96A19 550 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 SSH2Q76I76 1423 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 BCAMP50895 628 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 FANCCQ00597 558 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 FILIP1LQ4L180 1135 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 NEK11Q8NG66 645 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 EPC1Q9H2F5 836 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 CDC25AP30304 524 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 RESTQ13127 1097 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 MTX1Q13505 466 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 SMYD4Q8IYR2 804 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 VPS54Q9P1Q0 977 aa15.78■□□□□ 0.12
CACNA1A-209ENST00000587525 TMEM131LA2VDJ0 1609 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 CYP2D7A0A087X1C5 515 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 ATP6V1AP38606 617 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 FAM182BQ5T319 152 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 NBPF14Q5TI25 921 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 CADPS2Q86UW7 1296 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 SEC31BQ9NQW1 1179 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 WWC3Q9ULE0 1092 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 PAXBP1Q9Y5B6 917 aa15.77■□□□□ 0.12
CACNA1A-209ENST00000587525 SLU7O95391 586 aaKnown RBP15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 MATR3P43243 847 aaKnown RBP eCLIP15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 CARD6Q9BX69 1037 aa15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 SRRTQ9BXP5 876 aaKnown RBP15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 TFCP2L1Q9NZI6 479 aa15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 VWA3AA6NCI4 1184 aa15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 NCBP1Q09161 790 aaKnown RBP15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 APPBP2Q92624 585 aa15.77■□□□□ 0.11
CACNA1A-209ENST00000587525 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms