RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 KCNF1Q9H3M0 494 aa8.24□□□□□ -1.09
CACNA1A-208ENST00000587451 SUGCTQ9HAC7 445 aa8.24□□□□□ -1.09
CACNA1A-208ENST00000587451 PNMA6FA0A0J9YX94 578 aa8.23□□□□□ -1.09
CACNA1A-208ENST00000587451 TMEM238LA0A1B0GVL6 79 aa8.23□□□□□ -1.09
CACNA1A-208ENST00000587451 PREPP48147 710 aa8.23□□□□□ -1.09
CACNA1A-208ENST00000587451 POU4F3Q15319 338 aa8.23□□□□□ -1.09
CACNA1A-208ENST00000587451 KRTAP1-3Q8IUG1 177 aa8.23□□□□□ -1.09
CACNA1A-208ENST00000587451 SMG8Q8ND04 991 aaKnown RBP8.23□□□□□ -1.09
CACNA1A-208ENST00000587451 TMPRSS13Q9BYE2 586 aa8.23□□□□□ -1.09
CACNA1A-208ENST00000587451 ABCB6Q9NP58 842 aa8.23□□□□□ -1.09
CACNA1A-208ENST00000587451 BMP3P12645 472 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 XRCC5P13010 732 aaKnown RBP8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 AP3B2Q13367 1082 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 GRM2Q14416 872 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 DSC3Q14574 896 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 ZNF423Q2M1K9 1284 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 DTHD1Q6ZMT9 781 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 FAM20CQ8IXL6 584 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 EPS8L3Q8TE67 593 aaKnown RBP8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 FBF1Q8TES7 1133 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 YIPF2Q9BWQ6 316 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 RNF112Q9ULX5 631 aa8.22□□□□□ -1.09
CACNA1A-208ENST00000587451 IGLV1-40P01703 118 aa8.21□□□□□ -1.1
CACNA1A-208ENST00000587451 MAOBP27338 520 aa8.21□□□□□ -1.1
CACNA1A-208ENST00000587451 ATP2B2Q01814 1243 aa8.21□□□□□ -1.1
CACNA1A-208ENST00000587451 ENOX2Q16206 610 aaKnown RBP8.21□□□□□ -1.1
CACNA1A-208ENST00000587451 ASB16Q96NS5 453 aa8.21□□□□□ -1.1
CACNA1A-208ENST00000587451 RXRBP28702 533 aa8.2□□□□□ -1.1
CACNA1A-208ENST00000587451 MAPK8P45983 427 aa8.2□□□□□ -1.1
CACNA1A-208ENST00000587451 USP11P51784 963 aa8.2□□□□□ -1.1
CACNA1A-208ENST00000587451 PPP2R3AQ06190 1150 aa8.2□□□□□ -1.1
CACNA1A-208ENST00000587451 LRP8Q14114 963 aa8.2□□□□□ -1.1
CACNA1A-208ENST00000587451 BEND4Q6ZU67 534 aa8.2□□□□□ -1.1
CACNA1A-208ENST00000587451 C7orf69Q9H7B7 122 aa8.2□□□□□ -1.1
CACNA1A-208ENST00000587451 RAD18Q9NS91 495 aa8.2□□□□□ -1.1
CACNA1A-208ENST00000587451 FCGRTP55899 365 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 NFIAQ12857 509 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 RNF43Q68DV7 783 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 GIMAP7Q8NHV1 300 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 FAM83CQ9BQN1 747 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 DBNDD2Q9BQY9 259 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 BCO2Q9BYV7 579 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 NRSN2Q9GZP1 204 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 ZFP64Q9NPA5 681 aa8.19□□□□□ -1.1
CACNA1A-208ENST00000587451 TIAF1O95411 115 aa8.18□□□□□ -1.1
CACNA1A-208ENST00000587451 MAP4P27816 1152 aaKnown RBP8.18□□□□□ -1.1
CACNA1A-208ENST00000587451 PDE3AQ14432 1141 aa8.18□□□□□ -1.1
CACNA1A-208ENST00000587451 ARTNQ5T4W7 220 aa8.18□□□□□ -1.1
CACNA1A-208ENST00000587451 ALG1LQ6GMV1 187 aa8.18□□□□□ -1.1
CACNA1A-208ENST00000587451 TRIM42Q8IWZ5 723 aa8.18□□□□□ -1.1
CACNA1A-208ENST00000587451 SRCIN1Q9C0H9 1055 aa8.18□□□□□ -1.1
CACNA1A-208ENST00000587451 GPN3Q9UHW5 284 aaPredicted RBP8.18□□□□□ -1.1
CACNA1A-208ENST00000587451 HMX2A2RU54 273 aa8.17□□□□□ -1.1
CACNA1A-208ENST00000587451 FMR1Q06787 632 aaKnown RBP eCLIP8.17□□□□□ -1.1
CACNA1A-208ENST00000587451 SOX4Q06945 474 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-208ENST00000587451 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.17□□□□□ -1.1
CACNA1A-208ENST00000587451 NBPF11Q86T75 865 aa8.17□□□□□ -1.1
CACNA1A-208ENST00000587451 AEBP1Q8IUX7 1158 aa8.17□□□□□ -1.1
CACNA1A-208ENST00000587451 GLIS3Q8NEA6 775 aa8.17□□□□□ -1.1
CACNA1A-208ENST00000587451 TRIM56Q9BRZ2 755 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-208ENST00000587451 GIPC1O14908 333 aa8.16□□□□□ -1.1
CACNA1A-208ENST00000587451 DLGAP3O95886 979 aa8.16□□□□□ -1.1
CACNA1A-208ENST00000587451 ADH5P11766 374 aa8.16□□□□□ -1.1
CACNA1A-208ENST00000587451 GRIK1P39086 918 aa8.16□□□□□ -1.1
CACNA1A-208ENST00000587451 FGD1P98174 961 aa8.16□□□□□ -1.1
CACNA1A-208ENST00000587451 PAOXQ6QHF9 649 aa8.16□□□□□ -1.1
CACNA1A-208ENST00000587451 PI16Q6UXB8 463 aa8.16□□□□□ -1.1
CACNA1A-208ENST00000587451 TMEM39AQ9NV64 488 aa8.16□□□□□ -1.1
CACNA1A-208ENST00000587451 DRD2P14416 443 aa8.15□□□□□ -1.1
CACNA1A-208ENST00000587451 GSTT1P30711 240 aa8.15□□□□□ -1.1
CACNA1A-208ENST00000587451 SGO2Q562F6 1265 aa8.15□□□□□ -1.1
CACNA1A-208ENST00000587451 AKAP4Q5JQC9 854 aa8.15□□□□□ -1.1
CACNA1A-208ENST00000587451 AP4E1Q9UPM8 1137 aa8.15□□□□□ -1.1
CACNA1A-208ENST00000587451 SPG7Q9UQ90 795 aa8.15□□□□□ -1.1
CACNA1A-208ENST00000587451 AKAP2Q9Y2D5 859 aa8.15□□□□□ -1.1
CACNA1A-208ENST00000587451 FAM95CA0A1B0GW59 222 aa8.14□□□□□ -1.11
CACNA1A-208ENST00000587451 NXPE4Q6UWF7 544 aa8.14□□□□□ -1.11
CACNA1A-208ENST00000587451 C2CD4AQ8NCU7 369 aaPredicted RBP8.14□□□□□ -1.11
CACNA1A-208ENST00000587451 SYNGAP1Q96PV0 1343 aa8.13□□□□□ -1.11
CACNA1A-208ENST00000587451 COBLO75128 1261 aa8.13□□□□□ -1.11
CACNA1A-208ENST00000587451 ZNF157P51786 506 aaPredicted RBP8.13□□□□□ -1.11
CACNA1A-208ENST00000587451 FAAP100Q0VG06 881 aa8.13□□□□□ -1.11
CACNA1A-208ENST00000587451 NFKBIBQ15653 356 aa8.13□□□□□ -1.11
CACNA1A-208ENST00000587451 DYMQ7RTS9 669 aa8.13□□□□□ -1.11
CACNA1A-208ENST00000587451 PCMTD2Q9NV79 361 aa8.13□□□□□ -1.11
CACNA1A-208ENST00000587451 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 SLFN14P0C7P3 912 aa8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 MAP7Q14244 749 aa8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 INTS5Q6P9B9 1019 aaKnown RBP8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 SND1Q7KZF4 910 aaKnown RBP eCLIP8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 FBLIM1Q8WUP2 373 aa8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 EMILIN2Q9BXX0 1053 aa8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 CEP44Q9C0F1 390 aa8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 KRT82Q9NSB4 513 aa8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 SAMM50Q9Y512 469 aa8.12□□□□□ -1.11
CACNA1A-208ENST00000587451 HYAL3O43820 417 aaPredicted RBP8.11□□□□□ -1.11
CACNA1A-208ENST00000587451 AOC2O75106 756 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms