RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 SLFNL1Q499Z3 407 aa20.7■□□□□ 0.9
TMCO1-207ENST00000580248 CCDC102BQ68D86 513 aa20.7■□□□□ 0.9
TMCO1-207ENST00000580248 ANKRD18AQ8IVF6 992 aa20.7■□□□□ 0.9
TMCO1-207ENST00000580248 NSFL1CQ9UNZ2 370 aaKnown RBP20.7■□□□□ 0.9
TMCO1-207ENST00000580248 HOXA10P31260 410 aaPredicted RBP20.7■□□□□ 0.9
TMCO1-207ENST00000580248 BRF1Q92994 677 aa20.7■□□□□ 0.9
TMCO1-207ENST00000580248 POLD1P28340 1107 aa20.69■□□□□ 0.9
TMCO1-207ENST00000580248 RPS8P62241 208 aaKnown RBP20.69■□□□□ 0.9
TMCO1-207ENST00000580248 CELF1Q92879 486 aaKnown RBP20.69■□□□□ 0.9
TMCO1-207ENST00000580248 ZNF274Q96GC6 653 aaPredicted RBP20.69■□□□□ 0.9
TMCO1-207ENST00000580248 RBM17Q96I25 401 aaKnown RBP20.69■□□□□ 0.9
TMCO1-207ENST00000580248 KIF3AQ9Y496 699 aa20.69■□□□□ 0.9
TMCO1-207ENST00000580248 HMGN5P82970 282 aaKnown RBP20.68■□□□□ 0.9
TMCO1-207ENST00000580248 CCDC173Q0VFZ6 552 aa20.68■□□□□ 0.9
TMCO1-207ENST00000580248 STK3Q13188 491 aa20.68■□□□□ 0.9
TMCO1-207ENST00000580248 FOXD4L6Q3SYB3 417 aaPredicted RBP20.68■□□□□ 0.9
TMCO1-207ENST00000580248 FOXD4L3Q6VB84 417 aaPredicted RBP20.68■□□□□ 0.9
TMCO1-207ENST00000580248 SMARCC2Q8TAQ2 1214 aa20.68■□□□□ 0.9
TMCO1-207ENST00000580248 BSDC1Q9NW68 430 aaPredicted RBP20.68■□□□□ 0.9
TMCO1-207ENST00000580248 WDR19Q8NEZ3 1342 aa20.68■□□□□ 0.9
TMCO1-207ENST00000580248 GPAA1O43292 621 aa20.67■□□□□ 0.9
TMCO1-207ENST00000580248 GADD45BO75293 160 aaPredicted RBP20.67■□□□□ 0.9
TMCO1-207ENST00000580248 SRGNP10124 158 aa20.67■□□□□ 0.9
TMCO1-207ENST00000580248 KRT85P78386 507 aa20.67■□□□□ 0.9
TMCO1-207ENST00000580248 GRAPQ13588 217 aa20.67■□□□□ 0.9
TMCO1-207ENST00000580248 GRAPLQ8TC17 118 aaPredicted RBP20.67■□□□□ 0.9
TMCO1-207ENST00000580248 GDPD2Q9HCC8 539 aa20.67■□□□□ 0.9
TMCO1-207ENST00000580248 COL4A1P02462 1669 aa20.67■□□□□ 0.9
TMCO1-207ENST00000580248 EVCP57679 992 aa20.67■□□□□ 0.9
TMCO1-207ENST00000580248 CRAMP1Q96RY5 1269 aa20.67■□□□□ 0.9
TMCO1-207ENST00000580248 PUS7LQ9H0K6 701 aaKnown RBP20.67■□□□□ 0.9
TMCO1-207ENST00000580248 TAF1P21675 1872 aa20.66■□□□□ 0.9
TMCO1-207ENST00000580248 ELP1O95163 1332 aa20.66■□□□□ 0.9
TMCO1-207ENST00000580248 SYCE3A1L190 88 aa20.66■□□□□ 0.9
TMCO1-207ENST00000580248 FGAP02671 866 aa20.66■□□□□ 0.9
TMCO1-207ENST00000580248 NPR1P16066 1061 aa20.66■□□□□ 0.9
TMCO1-207ENST00000580248 PHKA1P46020 1223 aa20.66■□□□□ 0.9
TMCO1-207ENST00000580248 DNM1Q05193 864 aaKnown RBP20.66■□□□□ 0.9
TMCO1-207ENST00000580248 SLC9C2Q5TAH2 1124 aa20.66■□□□□ 0.9
TMCO1-207ENST00000580248 C10orf71Q711Q0 1435 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 ZNF213O14771 459 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 FOXP2O15409 715 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 SCRN1Q12765 414 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 CCDC183Q5T5S1 534 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 PI16Q6UXB8 463 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 PPP1R9BQ96SB3 815 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 SGIP1Q9BQI5 828 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 ZSCAN16Q9H4T2 348 aaPredicted RBP20.65■□□□□ 0.9
TMCO1-207ENST00000580248 DOCK2Q92608 1830 aa20.65■□□□□ 0.9
TMCO1-207ENST00000580248 H0YIN7 160 aa20.64■□□□□ 0.9
TMCO1-207ENST00000580248 FIBPO43427 364 aa20.64■□□□□ 0.9
TMCO1-207ENST00000580248 CDC37L1Q7L3B6 337 aa20.64■□□□□ 0.9
TMCO1-207ENST00000580248 C2CD5Q86YS7 1000 aa20.64■□□□□ 0.9
TMCO1-207ENST00000580248 SPATA5Q8NB90 893 aa20.64■□□□□ 0.9
TMCO1-207ENST00000580248 NCOA7Q8NI08 942 aa20.64■□□□□ 0.9
TMCO1-207ENST00000580248 MASTLQ96GX5 879 aa20.64■□□□□ 0.9
TMCO1-207ENST00000580248 SCAND2PQ9GZW5 306 aaPredicted RBP20.64■□□□□ 0.9
TMCO1-207ENST00000580248 PIH1D3Q9NQM4 214 aaKnown RBP20.64■□□□□ 0.9
TMCO1-207ENST00000580248 BBOX1O75936 387 aa20.64■□□□□ 0.89
TMCO1-207ENST00000580248 MCM5P33992 734 aa20.64■□□□□ 0.89
TMCO1-207ENST00000580248 FAM184AQ8NB25 1140 aa20.64■□□□□ 0.89
TMCO1-207ENST00000580248 RBSNQ9H1K0 784 aa20.64■□□□□ 0.89
TMCO1-207ENST00000580248 ZMYM6O95789 1325 aa20.63■□□□□ 0.89
TMCO1-207ENST00000580248 PDE6AP16499 860 aa20.63■□□□□ 0.89
TMCO1-207ENST00000580248 MAP3K12Q12852 859 aa20.63■□□□□ 0.89
TMCO1-207ENST00000580248 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
TMCO1-207ENST00000580248 MINPP1Q9UNW1 487 aa20.63■□□□□ 0.89
TMCO1-207ENST00000580248 ALDH1B1P30837 517 aa20.62■□□□□ 0.89
TMCO1-207ENST00000580248 CHRNDQ07001 517 aa20.62■□□□□ 0.89
TMCO1-207ENST00000580248 APOBRQ0VD83 1088 aa20.62■□□□□ 0.89
TMCO1-207ENST00000580248 ALX1Q15699 326 aa20.62■□□□□ 0.89
TMCO1-207ENST00000580248 NAA16Q6N069 864 aaPredicted RBP20.62■□□□□ 0.89
TMCO1-207ENST00000580248 HELBQ8NG08 1087 aaPredicted RBP20.62■□□□□ 0.89
TMCO1-207ENST00000580248 LRRC2Q9BYS8 371 aa20.62■□□□□ 0.89
TMCO1-207ENST00000580248 TSPY26PQ9H489 355 aa20.62■□□□□ 0.89
TMCO1-207ENST00000580248 ZNF532Q9HCE3 1301 aa20.62■□□□□ 0.89
TMCO1-207ENST00000580248 IDH1O75874 414 aaKnown RBP20.61■□□□□ 0.89
TMCO1-207ENST00000580248 PTGER2P43116 358 aa20.61■□□□□ 0.89
TMCO1-207ENST00000580248 STYK1Q6J9G0 422 aa20.61■□□□□ 0.89
TMCO1-207ENST00000580248 RALYLQ86SE5 291 aaKnown RBP20.61■□□□□ 0.89
TMCO1-207ENST00000580248 MB21D2Q8IYB1 491 aaPredicted RBP20.61■□□□□ 0.89
TMCO1-207ENST00000580248 NSUN7Q8NE18 718 aaKnown RBP20.61■□□□□ 0.89
TMCO1-207ENST00000580248 COL11A2P13942 1736 aaPredicted RBP20.61■□□□□ 0.89
TMCO1-207ENST00000580248 TCRBV5S4A2TA0A5A2 114 aa20.61■□□□□ 0.89
TMCO1-207ENST00000580248 H3BQV1 296 aa20.61■□□□□ 0.89
TMCO1-207ENST00000580248 PDIA3P30101 505 aaKnown RBP20.61■□□□□ 0.89
TMCO1-207ENST00000580248 IFFO2Q5TF58 517 aa20.61■□□□□ 0.89
TMCO1-207ENST00000580248 TRIM44Q96DX7 344 aaPredicted RBP20.61■□□□□ 0.89
TMCO1-207ENST00000580248 A0A0G2JLW4 131 aa20.6■□□□□ 0.89
TMCO1-207ENST00000580248 DHX16O60231 1041 aaKnown RBP20.6■□□□□ 0.89
TMCO1-207ENST00000580248 JAK2O60674 1132 aa20.6■□□□□ 0.89
TMCO1-207ENST00000580248 CHRNA5P30532 468 aa20.6■□□□□ 0.89
TMCO1-207ENST00000580248 TRDNQ13061 729 aa20.6■□□□□ 0.89
TMCO1-207ENST00000580248 TMC4Q7Z404 712 aa20.6■□□□□ 0.89
TMCO1-207ENST00000580248 ZNF622Q969S3 477 aaKnown RBP eCLIP20.6■□□□□ 0.894e-8■■■□□ 16.1
TMCO1-207ENST00000580248 RGS22Q8NE09 1264 aa20.59■□□□□ 0.89
TMCO1-207ENST00000580248 ANKRD2Q9GZV1 360 aa20.59■□□□□ 0.89
TMCO1-207ENST00000580248 SPON1Q9HCB6 807 aa20.59■□□□□ 0.89
TMCO1-207ENST00000580248 KIF13BQ9NQT8 1826 aa20.59■□□□□ 0.89
TMCO1-207ENST00000580248 MYO5AQ9Y4I1 1855 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms