RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 CCDC113Q9H0I3 377 aa17.24■□□□□ 0.35
ITGB4-206ENST00000579662 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
ITGB4-206ENST00000579662 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
ITGB4-206ENST00000579662 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
ITGB4-206ENST00000579662 PLEKHG1Q9ULL1 1385 aa17.24■□□□□ 0.35
ITGB4-206ENST00000579662 SKILP12757 684 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 ELP1O95163 1332 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 KDM2BQ8NHM5 1336 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 GOLGA6L10A0A0M3HER8 536 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 HLTFQ14527 1009 aaKnown RBP eCLIP17.23■□□□□ 0.35
ITGB4-206ENST00000579662 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 PUF60Q9UHX1 559 aaKnown RBP17.23■□□□□ 0.35
ITGB4-206ENST00000579662 SGSM2O43147 1006 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 MCM7P33993 719 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 MAP2K1Q02750 393 aaPredicted RBP17.23■□□□□ 0.35
ITGB4-206ENST00000579662 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 GLT8D2Q9H1C3 349 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 FAM13AO94988 1023 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 TMX1Q9H3N1 280 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 SYT1P21579 422 aa17.23■□□□□ 0.35
ITGB4-206ENST00000579662 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
ITGB4-206ENST00000579662 PRPF4BQ13523 1007 aaKnown RBP17.22■□□□□ 0.35
ITGB4-206ENST00000579662 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
ITGB4-206ENST00000579662 KRT83P78385 493 aa17.22■□□□□ 0.35
ITGB4-206ENST00000579662 KDRP35968 1356 aa17.22■□□□□ 0.35
ITGB4-206ENST00000579662 SAMD9LQ8IVG5 1584 aa17.22■□□□□ 0.35
ITGB4-206ENST00000579662 A1BGP04217 495 aa17.22■□□□□ 0.35
ITGB4-206ENST00000579662 SMC1AQ14683 1233 aaKnown RBP17.22■□□□□ 0.35
ITGB4-206ENST00000579662 SNX14Q9Y5W7 946 aa17.22■□□□□ 0.35
ITGB4-206ENST00000579662 ATP7BP35670 1465 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 ANGEL1Q9UNK9 670 aaKnown RBP17.21■□□□□ 0.35
ITGB4-206ENST00000579662 SYNMO15061 1565 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 ABCC4O15439 1325 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 ARMT1Q9H993 441 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 ERBB4Q15303 1308 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 GPAA1O43292 621 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 HS2ST1Q7LGA3 356 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 PHACTR2O75167 634 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
ITGB4-206ENST00000579662 PLCD1P51178 756 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 FMNL3Q8IVF7 1028 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 IMPG2Q9BZV3 1241 aa17.21■□□□□ 0.35
ITGB4-206ENST00000579662 B4E1Z4 1266 aa17.21■□□□□ 0.34
ITGB4-206ENST00000579662 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.34
ITGB4-206ENST00000579662 LMBR1Q8WVP7 490 aa17.21■□□□□ 0.34
ITGB4-206ENST00000579662 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.34
ITGB4-206ENST00000579662 YEATS2Q9ULM3 1422 aa17.2■□□□□ 0.34
ITGB4-206ENST00000579662 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
ITGB4-206ENST00000579662 DNAJC10Q8IXB1 793 aa17.2■□□□□ 0.34
ITGB4-206ENST00000579662 SELENOOQ9BVL4 669 aa17.2■□□□□ 0.34
ITGB4-206ENST00000579662 TACC1O75410 805 aa17.2■□□□□ 0.34
ITGB4-206ENST00000579662 CCDC175P0C221 793 aa17.2■□□□□ 0.34
ITGB4-206ENST00000579662 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-206ENST00000579662 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
ITGB4-206ENST00000579662 SUPT20HQ8NEM7 779 aa17.2■□□□□ 0.34
ITGB4-206ENST00000579662 OTUD7AQ8TE49 926 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-206ENST00000579662 ACTN2P35609 894 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 KIAA0753Q2KHM9 967 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 SRRTQ9BXP5 876 aaKnown RBP17.19■□□□□ 0.34
ITGB4-206ENST00000579662 STK24Q9Y6E0 443 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 MLH3Q9UHC1 1453 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 LTKP29376 864 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 MICALCLQ6ZW33 695 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 NEURL1BA8MQ27 555 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 RXRAP19793 462 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 HS1BP3Q53T59 392 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 DRC1Q96MC2 740 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 TTC37Q6PGP7 1564 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 PHKG2P15735 406 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
ITGB4-206ENST00000579662 BBXQ8WY36 941 aaPredicted RBP17.19■□□□□ 0.34
ITGB4-206ENST00000579662 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
ITGB4-206ENST00000579662 DYNC1I1O14576 645 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 ZKSCAN3Q9BRR0 538 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 ARHGEF10LQ9HCE6 1279 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 CTAGE15A4D2H0 777 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 CTAGE8P0CG41 777 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 CTAGE6Q86UF2 777 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 CTAGE4Q8IX94 777 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 ATP5JP18859 108 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
ITGB4-206ENST00000579662 CTR9Q6PD62 1173 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 KLHDC4Q8TBB5 520 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 SYNCQ9H7C4 482 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
ITGB4-206ENST00000579662 LZTS2Q9BRK4 669 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 SAP30BPQ9UHR5 308 aaKnown RBP17.18■□□□□ 0.34
ITGB4-206ENST00000579662 TUBB4BP68371 445 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 SV2BQ7L1I2 683 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 NEK11Q8NG66 645 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 DSCC1Q9BVC3 393 aa17.18■□□□□ 0.34
ITGB4-206ENST00000579662 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
ITGB4-206ENST00000579662 SEC24BO95487 1268 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms