RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 NUCB2P80303 420 aa24.41■■□□□ 1.5
CHRNE-202ENST00000572438 TOB2Q14106 344 aaPredicted RBP24.41■■□□□ 1.5
CHRNE-202ENST00000572438 DHX32Q7L7V1 743 aaKnown RBP24.41■■□□□ 1.5
CHRNE-202ENST00000572438 TDRD7Q8NHU6 1098 aaKnown RBP24.41■■□□□ 1.5
CHRNE-202ENST00000572438 ZMYM6O95789 1325 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 ZNF213O14771 459 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 LARGE1O95461 756 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 TBC1D16Q8TBP0 767 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 GPR101Q96P66 508 aaPredicted RBP24.4■■□□□ 1.5
CHRNE-202ENST00000572438 TPCN1Q9ULQ1 816 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 HAND2P61296 217 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 NAA16Q6N069 864 aaPredicted RBP24.4■■□□□ 1.5
CHRNE-202ENST00000572438 ADGRA1Q86SQ6 560 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 LCORLQ8N3X6 602 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 MIGA1Q8NAN2 632 aa24.4■■□□□ 1.5
CHRNE-202ENST00000572438 SALL1Q9NSC2 1324 aa24.39■■□□□ 1.49
CHRNE-202ENST00000572438 TMED8Q6PL24 325 aaPredicted RBP24.39■■□□□ 1.49
CHRNE-202ENST00000572438 TNPO1Q92973 898 aaKnown RBP24.39■■□□□ 1.49
CHRNE-202ENST00000572438 POLLQ9UGP5 575 aa24.39■■□□□ 1.49
CHRNE-202ENST00000572438 EXOSC10Q01780 885 aaKnown RBP24.38■■□□□ 1.49
CHRNE-202ENST00000572438 ME3Q16798 604 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 WDR66Q8TBY9 1149 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 NSUN4Q96CB9 384 aaKnown RBP24.38■■□□□ 1.49
CHRNE-202ENST00000572438 CACNA1SQ13698 1873 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 COL11A2P13942 1736 aaPredicted RBP24.38■■□□□ 1.49
CHRNE-202ENST00000572438 MYH13Q9UKX3 1938 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 MAGEB6P1A0A0J9YX57 407 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 IGSF3O75054 1194 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 SPTY2D1Q68D10 685 aaPredicted RBP24.38■■□□□ 1.49
CHRNE-202ENST00000572438 Q6ZUG5 572 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 IFNL3Q8IZI9 196 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 ZNF384Q8TF68 577 aa24.38■■□□□ 1.49
CHRNE-202ENST00000572438 EPB41L4AQ9HCS5 686 aaPredicted RBP24.38■■□□□ 1.49
CHRNE-202ENST00000572438 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.38■■□□□ 1.49
CHRNE-202ENST00000572438 LTBP1Q14766 1721 aa24.37■■□□□ 1.49
CHRNE-202ENST00000572438 GSG1L2A8MUP6 293 aa24.37■■□□□ 1.49
CHRNE-202ENST00000572438 C2CD5Q86YS7 1000 aa24.37■■□□□ 1.49
CHRNE-202ENST00000572438 SLC4A4Q9Y6R1 1079 aa24.37■■□□□ 1.49
CHRNE-202ENST00000572438 MECOMQ03112 1051 aa24.36■■□□□ 1.49
CHRNE-202ENST00000572438 NACAP1Q9BZK3 213 aa24.36■■□□□ 1.49
CHRNE-202ENST00000572438 NAPBQ9H115 298 aa24.36■■□□□ 1.49
CHRNE-202ENST00000572438 CD209Q9NNX6 404 aa24.36■■□□□ 1.49
CHRNE-202ENST00000572438 C6orf229H3BNL8 230 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 IL1R1P14778 569 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 PRDX5P30044 214 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 CCDC83Q8IWF9 413 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 RIOK1Q9BRS2 568 aaKnown RBP24.35■■□□□ 1.49
CHRNE-202ENST00000572438 JAG2Q9Y219 1238 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 H0YIN7 160 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 PRKAB2O43741 272 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 STYK1Q6J9G0 422 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 NBPF3Q9H094 633 aa24.35■■□□□ 1.49
CHRNE-202ENST00000572438 FGD1P98174 961 aa24.34■■□□□ 1.49
CHRNE-202ENST00000572438 NCOA7Q8NI08 942 aa24.34■■□□□ 1.49
CHRNE-202ENST00000572438 ZNF622Q969S3 477 aaKnown RBP eCLIP24.34■■□□□ 1.49
CHRNE-202ENST00000572438 MCM4P33991 863 aa24.33■■□□□ 1.49
CHRNE-202ENST00000572438 ST3GAL1Q11201 340 aa24.33■■□□□ 1.49
CHRNE-202ENST00000572438 PKP1Q13835 747 aa24.33■■□□□ 1.49
CHRNE-202ENST00000572438 LRRC2Q9BYS8 371 aa24.33■■□□□ 1.49
CHRNE-202ENST00000572438 AGXT2Q9BYV1 514 aa24.33■■□□□ 1.49
CHRNE-202ENST00000572438 TMX4Q9H1E5 349 aaPredicted RBP24.33■■□□□ 1.49
CHRNE-202ENST00000572438 RALYLQ86SE5 291 aaKnown RBP24.33■■□□□ 1.48
CHRNE-202ENST00000572438 TBC1D10CQ8IV04 446 aa24.33■■□□□ 1.48
CHRNE-202ENST00000572438 MB21D2Q8IYB1 491 aaPredicted RBP24.33■■□□□ 1.48
CHRNE-202ENST00000572438 MPNDQ8N594 471 aa24.33■■□□□ 1.48
CHRNE-202ENST00000572438 BRF1Q92994 677 aa24.33■■□□□ 1.48
CHRNE-202ENST00000572438 PDGFDQ9GZP0 370 aaPredicted RBP24.33■■□□□ 1.48
CHRNE-202ENST00000572438 LAMA4Q16363 1823 aa24.33■■□□□ 1.48
CHRNE-202ENST00000572438 MAST2Q6P0Q8 1798 aa24.32■■□□□ 1.48
CHRNE-202ENST00000572438 TDO2P48775 406 aa24.32■■□□□ 1.48
CHRNE-202ENST00000572438 DZIP1Q86YF9 867 aaKnown RBP24.32■■□□□ 1.48
CHRNE-202ENST00000572438 FBXL16Q8N461 479 aa24.32■■□□□ 1.48
CHRNE-202ENST00000572438 NECAB1Q8N987 351 aa24.32■■□□□ 1.48
CHRNE-202ENST00000572438 GBP4Q96PP9 640 aa24.32■■□□□ 1.48
CHRNE-202ENST00000572438 SMC3Q9UQE7 1217 aa24.32■■□□□ 1.48
CHRNE-202ENST00000572438 LDHBP07195 334 aaKnown RBP24.31■■□□□ 1.48
CHRNE-202ENST00000572438 MCM5P33992 734 aa24.31■■□□□ 1.48
CHRNE-202ENST00000572438 TRDNQ13061 729 aa24.31■■□□□ 1.48
CHRNE-202ENST00000572438 ZDHHC9Q9Y397 364 aa24.31■■□□□ 1.48
CHRNE-202ENST00000572438 DYNLL1P63167 89 aaKnown RBP24.31■■□□□ 1.48
CHRNE-202ENST00000572438 OLFM4Q6UX06 510 aa24.31■■□□□ 1.48
CHRNE-202ENST00000572438 DPP8Q6V1X1 898 aaPredicted RBP24.31■■□□□ 1.48
CHRNE-202ENST00000572438 CLEC17AQ6ZS10 378 aa24.31■■□□□ 1.48
CHRNE-202ENST00000572438 WDR19Q8NEZ3 1342 aa24.3■■□□□ 1.48
CHRNE-202ENST00000572438 DUOX1Q9NRD9 1551 aa24.3■■□□□ 1.48
CHRNE-202ENST00000572438 PRC1O43663 620 aa24.29■■□□□ 1.48
CHRNE-202ENST00000572438 CHST3Q7LGC8 479 aa24.29■■□□□ 1.48
CHRNE-202ENST00000572438 SLC16A10Q8TF71 515 aa24.29■■□□□ 1.48
CHRNE-202ENST00000572438 BRD1O95696 1058 aa24.28■■□□□ 1.48
CHRNE-202ENST00000572438 SDR42E1Q8WUS8 393 aa24.28■■□□□ 1.48
CHRNE-202ENST00000572438 CNKSR1Q969H4 720 aa24.28■■□□□ 1.48
CHRNE-202ENST00000572438 COA1Q9GZY4 146 aa24.28■■□□□ 1.48
CHRNE-202ENST00000572438 CHRNA5P30532 468 aa24.28■■□□□ 1.48
CHRNE-202ENST00000572438 GSTO1P78417 241 aa24.28■■□□□ 1.48
CHRNE-202ENST00000572438 GTF3C6Q969F1 213 aa24.28■■□□□ 1.48
CHRNE-202ENST00000572438 ZC3H12CQ9C0D7 883 aaKnown RBP24.28■■□□□ 1.48
CHRNE-202ENST00000572438 ANTXR2P58335 489 aa24.27■■□□□ 1.48
CHRNE-202ENST00000572438 STK3Q13188 491 aa24.27■■□□□ 1.48
CHRNE-202ENST00000572438 GIMAP6Q6P9H5 292 aa24.27■■□□□ 1.48
CHRNE-202ENST00000572438 AATFQ9NY61 560 aaKnown RBP eCLIP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms