RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 EXOSC6Q5RKV6 272 aaKnown RBP6.4□□□□□ -1.38
CDC27-213ENST00000571643 USPL1Q5W0Q7 1092 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 GIMAP7Q8NHV1 300 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 CCDC74AQ96AQ1 378 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 DBNDD2Q9BQY9 259 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 NIF3L1Q9GZT8 377 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 ZNF576Q9H609 170 aa6.4□□□□□ -1.38
CDC27-213ENST00000571643 GADD45BO75293 160 aaPredicted RBP6.39□□□□□ -1.39
CDC27-213ENST00000571643 B3GALT4O96024 378 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 IGHA2P01877 340 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 BMP3P12645 472 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 GRIK1P39086 918 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 GRIA4P48058 902 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 RNF43Q68DV7 783 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 FAM83CQ9BQN1 747 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 KCNF1Q9H3M0 494 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 C7orf69Q9H7B7 122 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 NLRP2Q9NX02 1062 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 PPP4R2Q9NY27 417 aa6.39□□□□□ -1.39
CDC27-213ENST00000571643 TIAF1O95411 115 aa6.38□□□□□ -1.39
CDC27-213ENST00000571643 AP3B2Q13367 1082 aa6.38□□□□□ -1.39
CDC27-213ENST00000571643 HGSNATQ68CP4 663 aa6.38□□□□□ -1.39
CDC27-213ENST00000571643 BEND4Q6ZU67 534 aa6.38□□□□□ -1.39
CDC27-213ENST00000571643 C12orf50Q8NA57 414 aaPredicted RBP6.38□□□□□ -1.39
CDC27-213ENST00000571643 CORO1BQ9BR76 489 aa6.38□□□□□ -1.39
CDC27-213ENST00000571643 XRCC5P13010 732 aaKnown RBP6.37□□□□□ -1.39
CDC27-213ENST00000571643 MAP4P27816 1152 aaKnown RBP6.37□□□□□ -1.39
CDC27-213ENST00000571643 MAPK1P28482 360 aa6.37□□□□□ -1.39
CDC27-213ENST00000571643 POU4F3Q15319 338 aa6.37□□□□□ -1.39
CDC27-213ENST00000571643 CPSF6Q16630 551 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDC27-213ENST00000571643 SPRED3Q2MJR0 410 aa6.37□□□□□ -1.39
CDC27-213ENST00000571643 INTS5Q6P9B9 1019 aaKnown RBP6.37□□□□□ -1.39
CDC27-213ENST00000571643 TMC7Q7Z402 723 aa6.37□□□□□ -1.39
CDC27-213ENST00000571643 ZSCAN29Q8IWY8 852 aaPredicted RBP6.37□□□□□ -1.39
CDC27-213ENST00000571643 TRIM42Q8IWZ5 723 aa6.37□□□□□ -1.39
CDC27-213ENST00000571643 NRSN2Q9GZP1 204 aa6.37□□□□□ -1.39
CDC27-213ENST00000571643 ABCB6Q9NP58 842 aa6.37□□□□□ -1.39
CDC27-213ENST00000571643 TMEM238LA0A1B0GVL6 79 aa6.36□□□□□ -1.39
CDC27-213ENST00000571643 COBLO75128 1261 aa6.36□□□□□ -1.39
CDC27-213ENST00000571643 CD97P48960 835 aa6.36□□□□□ -1.39
CDC27-213ENST00000571643 ZNF423Q2M1K9 1284 aa6.36□□□□□ -1.39
CDC27-213ENST00000571643 PCMTD2Q9NV79 361 aa6.36□□□□□ -1.39
CDC27-213ENST00000571643 SYNGAP1Q96PV0 1343 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 HMX2A2RU54 273 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 ADH5P11766 374 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 MAOBP27338 520 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 RXRBP28702 533 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 USP11P51784 963 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 MCTP1Q6DN14 999 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 PAOXQ6QHF9 649 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 ZDHHC13Q8IUH4 622 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 FBF1Q8TES7 1133 aa6.35□□□□□ -1.39
CDC27-213ENST00000571643 KIAA1324LA8MWY0 1029 aaPredicted RBP6.34□□□□□ -1.39
CDC27-213ENST00000571643 TREHO43280 583 aa6.34□□□□□ -1.39
CDC27-213ENST00000571643 PPP2R3AQ06190 1150 aa6.34□□□□□ -1.39
CDC27-213ENST00000571643 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.39
CDC27-213ENST00000571643 GRM2Q14416 872 aa6.34□□□□□ -1.39
CDC27-213ENST00000571643 DTHD1Q6ZMT9 781 aa6.34□□□□□ -1.39
CDC27-213ENST00000571643 METTL22Q9BUU2 404 aaPredicted RBP6.34□□□□□ -1.39
CDC27-213ENST00000571643 GOLGA2P5Q9HBQ8 144 aa6.34□□□□□ -1.39
CDC27-213ENST00000571643 RAD18Q9NS91 495 aa6.34□□□□□ -1.39
CDC27-213ENST00000571643 IVNS1ABPQ9Y6Y0 642 aa6.34□□□□□ -1.39
CDC27-213ENST00000571643 PNMA6FA0A0J9YX94 578 aa6.33□□□□□ -1.4
CDC27-213ENST00000571643 FAM95CA0A1B0GW59 222 aa6.33□□□□□ -1.4
CDC27-213ENST00000571643 PLCB3Q01970 1234 aa6.33□□□□□ -1.4
CDC27-213ENST00000571643 MAP7Q14244 749 aa6.33□□□□□ -1.4
CDC27-213ENST00000571643 ENOX2Q16206 610 aaKnown RBP6.33□□□□□ -1.4
CDC27-213ENST00000571643 SGO2Q562F6 1265 aa6.33□□□□□ -1.4
CDC27-213ENST00000571643 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
CDC27-213ENST00000571643 TRIM56Q9BRZ2 755 aaKnown RBP6.33□□□□□ -1.4
CDC27-213ENST00000571643 TRAIPQ9BWF2 469 aa6.33□□□□□ -1.4
CDC27-213ENST00000571643 SRCIN1Q9C0H9 1055 aa6.33□□□□□ -1.4
CDC27-213ENST00000571643 COL17A1Q9UMD9 1497 aaPredicted RBP6.33□□□□□ -1.4
CDC27-213ENST00000571643 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.32□□□□□ -1.4
CDC27-213ENST00000571643 DLGAP3O95886 979 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 TGFB1P01137 390 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 ATP2B2Q01814 1243 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 PDE3AQ14432 1141 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 DSC3Q14574 896 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 GLIS3Q8NEA6 775 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 SHKBP1Q8TBC3 707 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 EPS8L3Q8TE67 593 aaKnown RBP6.32□□□□□ -1.4
CDC27-213ENST00000571643 EZH1Q92800 747 aaPredicted RBP6.32□□□□□ -1.4
CDC27-213ENST00000571643 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 ATG3Q9NT62 314 aa6.32□□□□□ -1.4
CDC27-213ENST00000571643 MYO15BQ96JP2 1530 aa6.31□□□□□ -1.4
CDC27-213ENST00000571643 GIPC1O14908 333 aa6.31□□□□□ -1.4
CDC27-213ENST00000571643 ALG1LQ6GMV1 187 aa6.31□□□□□ -1.4
CDC27-213ENST00000571643 ASB16Q96NS5 453 aa6.31□□□□□ -1.4
CDC27-213ENST00000571643 KRT82Q9NSB4 513 aa6.31□□□□□ -1.4
CDC27-213ENST00000571643 GPN3Q9UHW5 284 aaPredicted RBP6.31□□□□□ -1.4
CDC27-213ENST00000571643 AP4E1Q9UPM8 1137 aa6.31□□□□□ -1.4
CDC27-213ENST00000571643 BTBD11A6QL63 1104 aa6.3□□□□□ -1.4
CDC27-213ENST00000571643 SSTR4P31391 388 aa6.3□□□□□ -1.4
CDC27-213ENST00000571643 FCGRTP55899 365 aa6.3□□□□□ -1.4
CDC27-213ENST00000571643 FGD1P98174 961 aa6.3□□□□□ -1.4
CDC27-213ENST00000571643 FMR1Q06787 632 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDC27-213ENST00000571643 NFKBIBQ15653 356 aa6.3□□□□□ -1.4
CDC27-213ENST00000571643 AKAP4Q5JQC9 854 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms