RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 CEP164Q9UPV0 1460 aa12.51□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 WDR62O43379 1518 aa12.5□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 CFTRP13569 1480 aa12.49□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 GADD45BO75293 160 aaPredicted RBP12.49□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 MAPK1P28482 360 aa12.49□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 PREPP48147 710 aa12.49□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 KCNA1Q09470 495 aa12.49□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 NUTM2GQ5VZR2 741 aa12.49□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 TMPRSS13Q9BYE2 586 aa12.49□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 IVNS1ABPQ9Y6Y0 642 aa12.49□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 ITPKAP23677 461 aa12.48□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.48□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 GSC2O15499 205 aa12.47□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 DLGAP3O95886 979 aa12.47□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 EXOSC6Q5RKV6 272 aaKnown RBP12.47□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 EPS8L3Q8TE67 593 aaKnown RBP12.47□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 NRSN2Q9GZP1 204 aa12.47□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 CYP4F12Q9HCS2 524 aa12.47□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 RNF112Q9ULX5 631 aa12.47□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 BMP3P12645 472 aa12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 PTPN12Q05209 780 aaKnown RBP12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 ARTNQ5T4W7 220 aa12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 FAM20CQ8IXL6 584 aa12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 C12orf50Q8NA57 414 aaPredicted RBP12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 SMG8Q8ND04 991 aaKnown RBP12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 SUGCTQ9HAC7 445 aa12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 ABCB6Q9NP58 842 aa12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.41
DNAAF4-CCPG1-202ENST00000568310 CYP11A1P05108 521 aa12.45□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 PLCB3Q01970 1234 aa12.45□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 C7orf69Q9H7B7 122 aa12.45□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 HIF3AQ9Y2N7 669 aa12.45□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 GAS2O43903 313 aaKnown RBP12.44□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 B3GALT4O96024 378 aa12.44□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 IGLV1-40P01703 118 aa12.44□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 DSC3Q14574 896 aa12.44□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 CLEC10AQ8IUN9 316 aa12.44□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 TRIM42Q8IWZ5 723 aa12.44□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 KCNF1Q9H3M0 494 aa12.44□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 ZFP64Q9NPA5 681 aa12.44□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 TMEM238LA0A1B0GVL6 79 aa12.43□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 HMX2A2RU54 273 aa12.43□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 TREHO43280 583 aa12.43□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 LRP8Q14114 963 aa12.43□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 GRM2Q14416 872 aa12.43□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 BEND4Q6ZU67 534 aa12.43□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 TIAF1O95411 115 aa12.42□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 MAOBP27338 520 aa12.42□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 POU4F3Q15319 338 aa12.42□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 FAM83CQ9BQN1 747 aa12.42□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 NFIAQ12857 509 aa12.41□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 ZFYVE1Q9HBF4 777 aa12.41□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 RPS26P11Q5JNZ5 115 aaPredicted RBP12.4□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 RNF43Q68DV7 783 aa12.4□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 PI16Q6UXB8 463 aa12.4□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 TRIM56Q9BRZ2 755 aaKnown RBP12.4□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.42
DNAAF4-CCPG1-202ENST00000568310 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 DRD2P14416 443 aa12.39□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 CORO1BQ9BR76 489 aa12.39□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 CTSBP07858 339 aa12.38□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 MAP4P27816 1152 aaKnown RBP12.38□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 ENOX2Q16206 610 aaKnown RBP12.38□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 ZSCAN29Q8IWY8 852 aaPredicted RBP12.38□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 PATL2C9JE40 543 aaKnown RBP12.37□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 SOX4Q06945 474 aaPredicted RBP12.37□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 SGO2Q562F6 1265 aa12.37□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 DTHD1Q6ZMT9 781 aa12.37□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 DBNDD2Q9BQY9 259 aa12.37□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 BCO2Q9BYV7 579 aa12.37□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 RXRBP28702 533 aa12.36□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 FCGRTP55899 365 aa12.36□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 ASB16Q96NS5 453 aa12.36□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 ECEL1O95672 775 aa12.35□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 USP11P51784 963 aa12.35□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 FAAP100Q0VG06 881 aa12.35□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.35□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 ZDHHC13Q8IUH4 622 aa12.35□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 C2CD4AQ8NCU7 369 aaPredicted RBP12.35□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 ADH5P11766 374 aa12.34□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 MAPK8P45983 427 aa12.34□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 ZNF157P51786 506 aaPredicted RBP12.34□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 RAD18Q9NS91 495 aa12.34□□□□□ -0.43
DNAAF4-CCPG1-202ENST00000568310 XRCC5P13010 732 aaKnown RBP12.33□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 TGFB1P01137 390 aa12.32□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 FMR1Q06787 632 aaKnown RBP eCLIP12.32□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms