RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CWC25Q9NXE8 425 aaPredicted RBP25.03■■□□□ 1.6
SPSB3-208ENST00000566339 NEDD4P46934 1319 aa25.03■■□□□ 1.6
SPSB3-208ENST00000566339 CYP27B1O15528 508 aa25.03■■□□□ 1.6
SPSB3-208ENST00000566339 E4F1Q66K89 784 aaPredicted RBP25.03■■□□□ 1.6
SPSB3-208ENST00000566339 SYNE3Q6ZMZ3 975 aa25.02■■□□□ 1.6
SPSB3-208ENST00000566339 JMYQ8N9B5 988 aa25.02■■□□□ 1.6
SPSB3-208ENST00000566339 CCDC191Q8NCU4 936 aa25.02■■□□□ 1.6
SPSB3-208ENST00000566339 PPP1R13BQ96KQ4 1090 aa25.02■■□□□ 1.6
SPSB3-208ENST00000566339 QTRT2Q9H974 415 aaKnown RBP25.02■■□□□ 1.6
SPSB3-208ENST00000566339 PPP6R2O75170 966 aa25.01■■□□□ 1.59
SPSB3-208ENST00000566339 RXRBP28702 533 aa25.01■■□□□ 1.59
SPSB3-208ENST00000566339 BMS1Q14692 1282 aaKnown RBP25.01■■□□□ 1.59
SPSB3-208ENST00000566339 NEUROD6Q96NK8 337 aa25.01■■□□□ 1.59
SPSB3-208ENST00000566339 XPO4Q9C0E2 1151 aaKnown RBP25.01■■□□□ 1.59
SPSB3-208ENST00000566339 NCOA5Q9HCD5 579 aaKnown RBP25.01■■□□□ 1.59
SPSB3-208ENST00000566339 TUBE1Q9UJT0 475 aa25.01■■□□□ 1.59
SPSB3-208ENST00000566339 AKAP2Q9Y2D5 859 aa25.01■■□□□ 1.59
SPSB3-208ENST00000566339 ZNF202O95125 648 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 TPM1P09493 284 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 SLFN14P0C7P3 912 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 H2AFXP16104 143 aaPredicted RBP25■■□□□ 1.59
SPSB3-208ENST00000566339 ANO1Q5XXA6 986 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 USP21Q9UK80 565 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 NDUFB9Q9Y6M9 179 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 A0A1B0GVL5 298 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 NCAPHQ15003 741 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 DPCR1Q3MIW9 517 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 MB21D2Q8IYB1 491 aaPredicted RBP25■■□□□ 1.59
SPSB3-208ENST00000566339 NCOA7Q8NI08 942 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 IFNKQ9P0W0 207 aa25■■□□□ 1.59
SPSB3-208ENST00000566339 MAP3K15Q6ZN16 1313 aa24.99■■□□□ 1.59
SPSB3-208ENST00000566339 SLC39A14Q15043 492 aa24.99■■□□□ 1.59
SPSB3-208ENST00000566339 TERF2Q15554 542 aa24.99■■□□□ 1.59
SPSB3-208ENST00000566339 ARMCX5Q6P1M9 558 aa24.99■■□□□ 1.59
SPSB3-208ENST00000566339 ZNF771Q7L3S4 317 aaPredicted RBP24.99■■□□□ 1.59
SPSB3-208ENST00000566339 TMC6Q7Z403 805 aa24.99■■□□□ 1.59
SPSB3-208ENST00000566339 ORC3Q9UBD5 711 aaPredicted RBP24.99■■□□□ 1.59
SPSB3-208ENST00000566339 CDKL5O76039 1030 aa24.98■■□□□ 1.59
SPSB3-208ENST00000566339 SMC2O95347 1197 aa24.98■■□□□ 1.59
SPSB3-208ENST00000566339 AXDND1Q5T1B0 1012 aaPredicted RBP24.98■■□□□ 1.59
SPSB3-208ENST00000566339 FBXO38Q6PIJ6 1188 aa24.98■■□□□ 1.59
SPSB3-208ENST00000566339 TRMT1Q9NXH9 659 aaKnown RBP24.98■■□□□ 1.59
SPSB3-208ENST00000566339 CLIC4Q9Y696 253 aa24.98■■□□□ 1.59
SPSB3-208ENST00000566339 ATP8B1O43520 1251 aa24.98■■□□□ 1.59
SPSB3-208ENST00000566339 CHGBP05060 677 aa24.98■■□□□ 1.59
SPSB3-208ENST00000566339 NAA30Q147X3 362 aaPredicted RBP24.98■■□□□ 1.59
SPSB3-208ENST00000566339 CCDC158Q5M9N0 1113 aa24.98■■□□□ 1.59
SPSB3-208ENST00000566339 FNBP4Q8N3X1 1017 aaPredicted RBP24.98■■□□□ 1.59
SPSB3-208ENST00000566339 SHANK3Q9BYB0 1731 aa24.97■■□□□ 1.59
SPSB3-208ENST00000566339 A0A1B0GUL7 405 aa24.97■■□□□ 1.59
SPSB3-208ENST00000566339 CCDC66A2RUB6 948 aa24.97■■□□□ 1.59
SPSB3-208ENST00000566339 ATP5J2-PTCD1G3V325 749 aa24.97■■□□□ 1.59
SPSB3-208ENST00000566339 PTCD1O75127 700 aaKnown RBP24.97■■□□□ 1.59
SPSB3-208ENST00000566339 ETF1P62495 437 aaKnown RBP24.97■■□□□ 1.59
SPSB3-208ENST00000566339 KIF23Q02241 960 aaPredicted RBP24.97■■□□□ 1.59
SPSB3-208ENST00000566339 APPBP2Q92624 585 aa24.97■■□□□ 1.59
SPSB3-208ENST00000566339 NOL10Q9BSC4 688 aaKnown RBP24.97■■□□□ 1.59
SPSB3-208ENST00000566339 HPSEQ9Y251 543 aa24.97■■□□□ 1.59
SPSB3-208ENST00000566339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.97■■□□□ 1.592e-6■□□□□ 9.8
SPSB3-208ENST00000566339 KCPQ6ZWJ8 1503 aa24.97■■□□□ 1.59
SPSB3-208ENST00000566339 GOLGA6L9A6NEM1 432 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 M0R2C6 588 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 PRC1O43663 620 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 FANCCQ00597 558 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 GUCY1B3Q02153 619 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 ELF2Q15723 593 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 TMX1Q9H3N1 280 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 CEP126Q9P2H0 1117 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 NAP1L2Q9ULW6 460 aaPredicted RBP24.96■■□□□ 1.59
SPSB3-208ENST00000566339 HPS5Q9UPZ3 1129 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 NWD2Q9ULI1 1742 aa24.96■■□□□ 1.59
SPSB3-208ENST00000566339 CPLX1O14810 134 aa24.95■■□□□ 1.59
SPSB3-208ENST00000566339 FOSBP53539 338 aa24.95■■□□□ 1.59
SPSB3-208ENST00000566339 ARGLU1Q9NWB6 273 aaPredicted RBP24.95■■□□□ 1.59
SPSB3-208ENST00000566339 C4AP0C0L4 1744 aa24.95■■□□□ 1.58
SPSB3-208ENST00000566339 C4BP0C0L5 1744 aa24.95■■□□□ 1.58
SPSB3-208ENST00000566339 KLF18A0A0U1RQI7 1052 aa24.95■■□□□ 1.58
SPSB3-208ENST00000566339 PFKFB1P16118 471 aa24.95■■□□□ 1.58
SPSB3-208ENST00000566339 CABP4P57796 275 aa24.95■■□□□ 1.58
SPSB3-208ENST00000566339 TIMM10P62072 90 aa24.95■■□□□ 1.58
SPSB3-208ENST00000566339 RALYLQ86SE5 291 aaKnown RBP24.95■■□□□ 1.58
SPSB3-208ENST00000566339 OSBP2Q969R2 916 aa24.95■■□□□ 1.58
SPSB3-208ENST00000566339 GOLGA8BA8MQT2 603 aa24.94■■□□□ 1.58
SPSB3-208ENST00000566339 CPLX2Q6PUV4 134 aaKnown RBP24.94■■□□□ 1.58
SPSB3-208ENST00000566339 ZSCAN12O43309 604 aa24.93■■□□□ 1.58
SPSB3-208ENST00000566339 MYL5Q02045 173 aa24.93■■□□□ 1.58
SPSB3-208ENST00000566339 ZMYM6O95789 1325 aa24.93■■□□□ 1.58
SPSB3-208ENST00000566339 CSB-PGBD3P0DP91 1061 aa24.93■■□□□ 1.58
SPSB3-208ENST00000566339 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.93■■□□□ 1.58
SPSB3-208ENST00000566339 ABCA3Q99758 1704 aa24.92■■□□□ 1.58
SPSB3-208ENST00000566339 SYKP43405 635 aa24.92■■□□□ 1.58
SPSB3-208ENST00000566339 TRPC5Q9UL62 973 aaPredicted RBP24.92■■□□□ 1.58
SPSB3-208ENST00000566339 ATRNO75882 1429 aa24.92■■□□□ 1.58
SPSB3-208ENST00000566339 TTC39AQ5SRH9 613 aa24.91■■□□□ 1.58
SPSB3-208ENST00000566339 TNS2Q63HR2 1409 aa24.91■■□□□ 1.58
SPSB3-208ENST00000566339 SYT10Q6XYQ8 523 aa24.91■■□□□ 1.58
SPSB3-208ENST00000566339 ZNF512BQ96KM6 892 aaPredicted RBP24.91■■□□□ 1.58
SPSB3-208ENST00000566339 ZNF213O14771 459 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 CUTAO60888 179 aa24.9■■□□□ 1.58
SPSB3-208ENST00000566339 FGAP02671 866 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms