RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 PTPRCP08575 1304 aa11.96□□□□□ -0.5
SNX29-205ENST00000566228 SMIM24O75264 130 aa11.96□□□□□ -0.5
SNX29-205ENST00000566228 EPB41P11171 864 aaKnown RBP11.96□□□□□ -0.5
SNX29-205ENST00000566228 IFNA8P32881 189 aa11.96□□□□□ -0.5
SNX29-205ENST00000566228 PDZD4Q76G19 769 aaPredicted RBP11.96□□□□□ -0.5
SNX29-205ENST00000566228 TCP11L2Q8N4U5 519 aa11.96□□□□□ -0.5
SNX29-205ENST00000566228 GNAT2P19087 354 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
SNX29-205ENST00000566228 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 TSPY3P0CV98 308 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 TSPY8P0CW00 308 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 GBP5Q96PP8 586 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 SPATS2Q86XZ4 545 aaKnown RBP11.95□□□□□ -0.5
SNX29-205ENST00000566228 RTL9Q8NET4 1388 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 GOLGA4Q13439 2230 aaKnown RBP11.95□□□□□ -0.5
SNX29-205ENST00000566228 CARD10Q9BWT7 1032 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 TRIM6Q9C030 488 aaPredicted RBP11.95□□□□□ -0.5
SNX29-205ENST00000566228 MTMR3Q13615 1198 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 SYCE1Q8N0S2 351 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 NUP58Q9BVL2 599 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 A0A1B0GUL7 405 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 M0QZ92 97 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 DEUP1Q05D60 604 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 ANKRD20A3Q5VUR7 823 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 PODNQ7Z5L7 613 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
SNX29-205ENST00000566228 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 ATL3Q6DD88 541 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 MX1P20591 662 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 IFIT1BQ5T764 474 aaKnown RBP11.94□□□□□ -0.5
SNX29-205ENST00000566228 PRG4Q92954 1404 aaPredicted RBP11.94□□□□□ -0.5
SNX29-205ENST00000566228 HNRNPCL2B2RXH8 293 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 C6orf229H3BNL8 230 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 HNRNPCL1O60812 293 aaKnown RBP11.94□□□□□ -0.5
SNX29-205ENST00000566228 IFT20Q8IY31 132 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 ZKSCAN3Q9BRR0 538 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.94□□□□□ -0.5
SNX29-205ENST00000566228 ATP2C2O75185 946 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 CYP26C1Q6V0L0 522 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 PPANQ9NQ55 473 aaKnown RBP11.94□□□□□ -0.5
SNX29-205ENST00000566228 RRAGBQ5VZM2 374 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 KRT79Q5XKE5 535 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 PPP1R12CQ9BZL4 782 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 TYW5A2RUC4 315 aaKnown RBP11.94□□□□□ -0.5
SNX29-205ENST00000566228 SPECC1L-ADORA2AF8WAN1 911 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 ESRRGP62508 458 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 CCDC93Q567U6 631 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 MYO15BQ96JP2 1530 aa11.94□□□□□ -0.5
SNX29-205ENST00000566228 EVI5O60447 810 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 ZNF131P52739 623 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 ELMSAN1Q6PJG2 1045 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 SLC52A1Q9NWF4 448 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 CTTNBP2NLQ9P2B4 639 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 TTC4O95801 387 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 LMNB1P20700 586 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 WTAPQ15007 396 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 CCDC25Q86WR0 208 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 FNBP4Q8N3X1 1017 aaPredicted RBP11.93□□□□□ -0.5
SNX29-205ENST00000566228 TMCO5AQ8N6Q1 288 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 XAB2Q9HCS7 855 aaKnown RBP11.93□□□□□ -0.5
SNX29-205ENST00000566228 LMOD1P29536 600 aaPredicted RBP11.93□□□□□ -0.5
SNX29-205ENST00000566228 ANKLE2Q86XL3 938 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 MMRN2Q9H8L6 949 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 SNAPC4Q5SXM2 1469 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 ZEB2O60315 1214 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 SLC5A4Q9NY91 659 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 PSMD6Q15008 389 aa11.93□□□□□ -0.5
SNX29-205ENST00000566228 C16orf72Q14CZ0 275 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 CCDC152Q4G0S7 254 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 TRIM56Q9BRZ2 755 aaKnown RBP11.92□□□□□ -0.5
SNX29-205ENST00000566228 NUCKS1Q9H1E3 243 aaKnown RBP11.92□□□□□ -0.5
SNX29-205ENST00000566228 RASSF4Q9H2L5 321 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 TROVE2P10155 538 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNX29-205ENST00000566228 NUCB1Q02818 461 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 UBLCP1Q8WVY7 318 aaPredicted RBP11.92□□□□□ -0.5
SNX29-205ENST00000566228 CSRNP1Q96S65 589 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 ARID5AQ03989 594 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 PATL1Q86TB9 770 aaKnown RBP11.92□□□□□ -0.5
SNX29-205ENST00000566228 EFHD1Q9BUP0 239 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 TRMT1Q9NXH9 659 aaKnown RBP11.92□□□□□ -0.5
SNX29-205ENST00000566228 AMOTL2Q9Y2J4 779 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 ALDH1L2Q3SY69 923 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 TXNDC2Q86VQ3 553 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 LEO1Q8WVC0 666 aaPredicted RBP11.92□□□□□ -0.5
SNX29-205ENST00000566228 KIF21BO75037 1637 aa11.92□□□□□ -0.5
SNX29-205ENST00000566228 PALM2Q8IXS6 379 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 ARHGEF6Q15052 776 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
SNX29-205ENST00000566228 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 MAP3K7O43318 606 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 ASIC1P78348 528 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 KIFC3Q9BVG8 833 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 EVCP57679 992 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 SND1Q7KZF4 910 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNX29-205ENST00000566228 STX8Q9UNK0 236 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 STRN3Q13033 797 aa11.91□□□□□ -0.5
SNX29-205ENST00000566228 FAM71BQ8TC56 605 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms