RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 LEMD3Q9Y2U8 911 aa8.89□□□□□ -0.99
MAP1LC3B-205ENST00000564638 SNX14Q9Y5W7 946 aa8.89□□□□□ -0.99
MAP1LC3B-205ENST00000564638 GJA3Q9Y6H8 435 aa8.89□□□□□ -0.99
MAP1LC3B-205ENST00000564638 MROH5Q6ZUA9 1318 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 GOLGA6L22H0YM25 854 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 ECE2O60344 883 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 DPY19L2Q6NUT2 758 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 FBXW7Q969H0 707 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 TMX3Q96JJ7 454 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 FAM227BQ96M60 508 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 UPF3BQ9BZI7 483 aaKnown RBP8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 VPS33BQ9H267 617 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 RIPOR2Q9Y4F9 1068 aa8.88□□□□□ -0.99
MAP1LC3B-205ENST00000564638 SCN9AQ15858 1988 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 A0A0D9SFI3 127 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 A0A1B0GUL7 405 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 GLTPD2A6NH11 291 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 FZD9O00144 591 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 RAD17O75943 681 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 DDNO94850 711 aaPredicted RBP8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 KLRK1P26718 216 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 MLLT1Q03111 559 aaPredicted RBP8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PTH1RQ03431 593 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CUL4AQ13619 759 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 LRRFIP1Q32MZ4 808 aaKnown RBP8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 NOL8Q76FK4 1167 aaKnown RBP8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 KBTBD3Q8NAB2 608 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 KCNB2Q92953 911 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 INTS4Q96HW7 963 aaKnown RBP8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 TM6SF1Q9BZW5 370 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 HMG20BQ9P0W2 317 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 MKRN1Q9UHC7 482 aaKnown RBP8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 ZNRF3Q9ULT6 936 aa8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 RBM8AQ9Y5S9 174 aaKnown RBP8.87□□□□□ -0.99
MAP1LC3B-205ENST00000564638 A0A0C4DFX4 3053 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 YDJCA8MPS7 323 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CASTP20810 708 aaKnown RBP8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PSMA5P28066 241 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 UBE4AQ14139 1066 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CCDC158Q5M9N0 1113 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 TTC39AQ5SRH9 613 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 GORABQ5T7V8 394 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CREB3L3Q68CJ9 461 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CIAPIN1Q6FI81 312 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 TXNRD3Q86VQ6 643 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 MAP4K1Q92918 833 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 JAKMIP1Q96N16 626 aaKnown RBP8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PAG1Q9NWQ8 432 aa8.86□□□□□ -0.99
MAP1LC3B-205ENST00000564638 LAMA4Q16363 1823 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 GOLIM4O00461 696 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PDE8BO95263 885 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CYP2E1P05181 493 aaPredicted RBP8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 IFIT1P09914 478 aaKnown RBP8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 SLC5A1P13866 664 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 GYG1P46976 350 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 LBX1P52954 281 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CXCL9Q07325 125 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 TNIP1Q15025 636 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PUM3Q15397 648 aaKnown RBP8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 ATP2B3Q16720 1220 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 SKOR2Q2VWA4 1001 aaPredicted RBP8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CLEC17AQ6ZS10 378 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 ZNF804AQ7Z570 1209 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 VPS37DQ86XT2 251 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 RASEFQ8IZ41 740 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 ZGPATQ8N5A5 531 aaKnown RBP8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 EDC3Q96F86 508 aaKnown RBP8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 ZSCAN31Q96LW9 406 aaPredicted RBP8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 TTC14Q96N46 770 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 KCNQ5Q9NR82 932 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PDRG1Q9NUG6 133 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CYP46A1Q9Y6A2 500 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 AKAP11Q9UKA4 1901 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 MYH13Q9UKX3 1938 aa8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 RPAP1Q9BWH6 1393 aaPredicted RBP8.85□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PSME4Q14997 1843 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 PSMD14O00487 310 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 SLC27A2O14975 620 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 TRAK2O60296 914 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 LMOD1P29536 600 aaPredicted RBP8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 AK2P54819 239 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 TIMM10P62072 90 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 KRT32Q14532 448 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 NECTIN1Q15223 517 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 MCMDC2Q4G0Z9 681 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 VPS53Q5VIR6 699 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 GPC2Q8N158 579 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 VGLL2Q8N8G2 317 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 XAGE2Q96GT9 111 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 COA1Q9GZY4 146 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 SH2B1Q9NRF2 756 aaPredicted RBP8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 HELLSQ9NRZ9 838 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 IQSEC3Q9UPP2 1182 aaPredicted RBP8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 LIMCH1Q9UPQ0 1083 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 CNTNAP1P78357 1384 aa8.84□□□□□ -0.99
MAP1LC3B-205ENST00000564638 DOCK2Q92608 1830 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms