RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ATRNO75882 1429 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 C4AP0C0L4 1744 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 C4BP0C0L5 1744 aa15.21■□□□□ 0.02
USB1-207ENST00000563149 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
USB1-207ENST00000563149 TUBB4AP04350 444 aa15.2■□□□□ 0.02
USB1-207ENST00000563149 SLC3A2P08195 630 aaKnown RBP15.2■□□□□ 0.02
USB1-207ENST00000563149 KCNJ6P48051 423 aa15.2■□□□□ 0.02
USB1-207ENST00000563149 KIF23Q02241 960 aaPredicted RBP15.2■□□□□ 0.02
USB1-207ENST00000563149 ANO1Q5XXA6 986 aa15.2■□□□□ 0.02
USB1-207ENST00000563149 NYAP1Q6ZVC0 841 aa15.2■□□□□ 0.02
USB1-207ENST00000563149 PUS7LQ9H0K6 701 aaKnown RBP15.2■□□□□ 0.02
USB1-207ENST00000563149 PRDM11Q9NQV5 511 aa15.2■□□□□ 0.02
USB1-207ENST00000563149 CGNQ9P2M7 1197 aaKnown RBP15.2■□□□□ 0.02
USB1-207ENST00000563149 SHANK3Q9BYB0 1731 aa15.2■□□□□ 0.02
USB1-207ENST00000563149 ZMYM6O95789 1325 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 ADD2P35612 726 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 HAND2P61296 217 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 NCBP1Q09161 790 aaKnown RBP15.19■□□□□ 0.02
USB1-207ENST00000563149 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 UTP14CQ5TAP6 766 aaKnown RBP15.19■□□□□ 0.02
USB1-207ENST00000563149 CPLX2Q6PUV4 134 aaKnown RBP15.19■□□□□ 0.02
USB1-207ENST00000563149 CCDC150Q8NCX0 1101 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 RIPOR2Q9Y4F9 1068 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 FAM177BA6PVY3 158 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 IKBKBO14920 756 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 PPP6R2O75170 966 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 ZNF202O95125 648 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 POLR3DP05423 398 aaPredicted RBP15.19■□□□□ 0.02
USB1-207ENST00000563149 SCARF1Q14162 830 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 SLC39A14Q15043 492 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 HSP90AB3PQ58FF7 597 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 JMYQ8N9B5 988 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 PKNOX2Q96KN3 472 aa15.19■□□□□ 0.02
USB1-207ENST00000563149 GPHNQ9NQX3 736 aaPredicted RBP15.19■□□□□ 0.02
USB1-207ENST00000563149 NRDCO43847 1150 aa15.18■□□□□ 0.02
USB1-207ENST00000563149 AXDND1Q5T1B0 1012 aaPredicted RBP15.18■□□□□ 0.02
USB1-207ENST00000563149 FILIP1Q7Z7B0 1213 aa15.18■□□□□ 0.02
USB1-207ENST00000563149 TMEM87BQ96K49 555 aa15.18■□□□□ 0.02
USB1-207ENST00000563149 ANGEL1Q9UNK9 670 aaKnown RBP15.18■□□□□ 0.02
USB1-207ENST00000563149 RIC1Q4ADV7 1423 aa15.17■□□□□ 0.02
USB1-207ENST00000563149 NEDD4P46934 1319 aa15.17■□□□□ 0.02
USB1-207ENST00000563149 FAM237AA0A1B0GTK4 181 aa15.17■□□□□ 0.02
USB1-207ENST00000563149 MYO1BO43795 1136 aa15.17■□□□□ 0.02
USB1-207ENST00000563149 METTL24Q5JXM2 366 aa15.17■□□□□ 0.02
USB1-207ENST00000563149 OTUD7BQ6GQQ9 843 aa15.17■□□□□ 0.02
USB1-207ENST00000563149 GIGYF2Q6Y7W6 1299 aaKnown RBP15.17■□□□□ 0.02
USB1-207ENST00000563149 NBPF11Q86T75 865 aa15.17■□□□□ 0.02
USB1-207ENST00000563149 CCAR2Q8N163 923 aaKnown RBP15.17■□□□□ 0.02
USB1-207ENST00000563149 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
USB1-207ENST00000563149 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
USB1-207ENST00000563149 SH2B2O14492 632 aaPredicted RBP15.16■□□□□ 0.02
USB1-207ENST00000563149 STARD3NLO95772 234 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 ARID5BQ14865 1188 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 ALX1Q15699 326 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 FAM89AQ96GI7 184 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 GTPBP4Q9BZE4 634 aaKnown RBP15.16■□□□□ 0.02
USB1-207ENST00000563149 TMOD3Q9NYL9 352 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 AKAP11Q9UKA4 1901 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 KIF28PB7ZC32 967 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 UQCRFS1P1P0C7P4 283 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 PFKFB1P16118 471 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 MCAMP43121 646 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
USB1-207ENST00000563149 DPCR1Q3MIW9 517 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 LDHAL6AQ6ZMR3 332 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 KIF18AQ8NI77 898 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 ARID3AQ99856 593 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 OGFRQ9NZT2 677 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 TUBE1Q9UJT0 475 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 HPSEQ9Y251 543 aa15.16■□□□□ 0.02
USB1-207ENST00000563149 PPFIA3O75145 1194 aa15.15■□□□□ 0.02
USB1-207ENST00000563149 DMTNQ08495 405 aa15.15■□□□□ 0.02
USB1-207ENST00000563149 ELOA2Q8IYF1 753 aaPredicted RBP15.15■□□□□ 0.02
USB1-207ENST00000563149 TTLL11Q8NHH1 800 aa15.15■□□□□ 0.02
USB1-207ENST00000563149 USP27XA6NNY8 438 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 CCP110O43303 1012 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 ITGA6P23229 1130 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 ARID4AP29374 1257 aaPredicted RBP15.14■□□□□ 0.01
USB1-207ENST00000563149 SYKP43405 635 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 CBX1P83916 185 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 NCAPHQ15003 741 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 SLC9C2Q5TAH2 1124 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 BRINP3Q76B58 766 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 SGMS1Q86VZ5 419 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 ERO1AQ96HE7 468 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 XPO4Q9C0E2 1151 aaKnown RBP15.14■□□□□ 0.01
USB1-207ENST00000563149 PRDM4Q9UKN5 801 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 SOS2Q07890 1332 aaPredicted RBP15.14■□□□□ 0.01
USB1-207ENST00000563149 STK36Q9NRP7 1315 aa15.14■□□□□ 0.01
USB1-207ENST00000563149 A0A087WWV3 80 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 CBFA2T2O43439 604 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 CTSWP56202 376 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 KRT40Q6A162 431 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 APOA5Q6Q788 366 aa15.13■□□□□ 0.01
USB1-207ENST00000563149 NLRP10Q86W26 655 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms