RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 NFIXQ14938 502 aa16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 STRBPQ96SI9 672 aaKnown RBP16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 BSDC1Q9NW68 430 aaPredicted RBP16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 ATRNO75882 1429 aa16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 KDM4AO75164 1064 aa16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 RPS8P62241 208 aaKnown RBP16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 TPTE2Q6XPS3 522 aa16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 GPR101Q96P66 508 aaPredicted RBP16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 RAI14Q9P0K7 980 aa16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
CARMIL3-203ENST00000560349 LAMB2P55268 1798 aa16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 ESPNB1AK53 854 aa16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 B4E1Z4 1266 aa16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 PDIA3P30101 505 aaKnown RBP16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 TXNRD3Q86VQ6 643 aa16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 SENP2Q9HC62 589 aa16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 PTPDC1A2A3K4 754 aa16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 MB21D2Q8IYB1 491 aaPredicted RBP16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 CASZ1Q86V15 1759 aa16.62■□□□□ 0.25
CARMIL3-203ENST00000560349 NEDD4P46934 1319 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 PFKFB2O60825 505 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 SDR42E1Q8WUS8 393 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 FAM84BQ96KN1 310 aaPredicted RBP16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 SBF2Q86WG5 1849 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 ARAP2Q8WZ64 1704 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 KLF18A0A0U1RQI7 1052 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 ONECUT3O60422 494 aaPredicted RBP16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 CHAF1AQ13111 956 aaPredicted RBP16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 CYB5R4Q7L1T6 521 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 FAM184AQ8NB25 1140 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
CARMIL3-203ENST00000560349 CYP7A1P22680 504 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 CCDC144CPQ8IYA2 1237 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 NCOA7Q8NI08 942 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 NAPBQ9H115 298 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 MCM5P33992 734 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 SLC10A5Q5PT55 438 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 IFNL3Q8IZI9 196 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 TOMM22Q9NS69 142 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 GJB4Q9NTQ9 266 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 SLC4A4Q9Y6R1 1079 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 TAF1LQ8IZX4 1826 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 ZNF831Q5JPB2 1677 aa16.6■□□□□ 0.25
CARMIL3-203ENST00000560349 H3BQV1 296 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 IFFO2Q5TF58 517 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 AGXT2Q9BYV1 514 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 UTRNP46939 3433 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 GSG1L2A8MUP6 293 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 TM4SF1P30408 202 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 TDO2P48775 406 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 CAVIN4Q5BKX8 364 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 TICAM2Q86XR7 235 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 RNF214Q8ND24 703 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
CARMIL3-203ENST00000560349 TNRC6CQ9HCJ0 1690 aaKnown RBP16.58■□□□□ 0.25
CARMIL3-203ENST00000560349 C4AP0C0L4 1744 aa16.58■□□□□ 0.25
CARMIL3-203ENST00000560349 MBD3O95983 291 aa16.58■□□□□ 0.25
CARMIL3-203ENST00000560349 PDCP20941 246 aa16.58■□□□□ 0.25
CARMIL3-203ENST00000560349 NAP1L5Q96NT1 182 aaPredicted RBP16.58■□□□□ 0.25
CARMIL3-203ENST00000560349 ZKSCAN3Q9BRR0 538 aa16.58■□□□□ 0.25
CARMIL3-203ENST00000560349 FTOQ9C0B1 505 aaKnown RBP eCLIP16.58■□□□□ 0.25
CARMIL3-203ENST00000560349 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.25
CARMIL3-203ENST00000560349 DYNLL1P63167 89 aaKnown RBP16.58■□□□□ 0.24
CARMIL3-203ENST00000560349 TRDNQ13061 729 aa16.58■□□□□ 0.24
CARMIL3-203ENST00000560349 UBE4AQ14139 1066 aa16.58■□□□□ 0.24
CARMIL3-203ENST00000560349 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
CARMIL3-203ENST00000560349 ZNF384Q8TF68 577 aa16.58■□□□□ 0.24
CARMIL3-203ENST00000560349 TRIM44Q96DX7 344 aaPredicted RBP16.58■□□□□ 0.24
CARMIL3-203ENST00000560349 RBSNQ9H1K0 784 aa16.58■□□□□ 0.24
CARMIL3-203ENST00000560349 ZNF804BA4D1E1 1349 aa16.58■□□□□ 0.24
CARMIL3-203ENST00000560349 SLC4A8Q2Y0W8 1093 aa16.57■□□□□ 0.24
CARMIL3-203ENST00000560349 LY75O60449 1722 aa16.57■□□□□ 0.24
CARMIL3-203ENST00000560349 CYP2D7A0A087X1C5 515 aa16.57■□□□□ 0.24
CARMIL3-203ENST00000560349 EVX2Q03828 476 aa16.57■□□□□ 0.24
CARMIL3-203ENST00000560349 ANKIB1Q9P2G1 1089 aa16.57■□□□□ 0.24
CARMIL3-203ENST00000560349 PATL2C9JE40 543 aaKnown RBP16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 GYS1P13807 737 aa16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 NASPP49321 788 aaPredicted RBP16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 ZNF445P59923 1031 aa16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 PRR5LQ6MZQ0 368 aa16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 HPS5Q9UPZ3 1129 aa16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 PRDX5P30044 214 aa16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 MICU3Q86XE3 530 aa16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 CARMIL3Q8ND23 1372 aa16.56■□□□□ 0.24
CARMIL3-203ENST00000560349 MINDY4BA8MYZ0 360 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms