RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 SYNE4Q8N205 404 aa7.99□□□□□ -1.13
MARK3-216ENST00000558953 RPGRQ92834 1020 aaKnown RBP7.99□□□□□ -1.13
MARK3-216ENST00000558953 CRAMP1Q96RY5 1269 aa7.99□□□□□ -1.13
MARK3-216ENST00000558953 COL25A1Q9BXS0 654 aaPredicted RBP7.99□□□□□ -1.13
MARK3-216ENST00000558953 PRKRIP1Q9H875 184 aaPredicted RBP7.99□□□□□ -1.13
MARK3-216ENST00000558953 ZNF277Q9NRM2 450 aaPredicted RBP7.99□□□□□ -1.13
MARK3-216ENST00000558953 RNF123Q5XPI4 1314 aa7.99□□□□□ -1.13
MARK3-216ENST00000558953 IQCA1LA6NCM1 817 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 IARSP41252 1262 aaKnown RBP7.98□□□□□ -1.13
MARK3-216ENST00000558953 HTRA3P83110 453 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 PROSER3Q2NL68 480 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 SLC10A5Q5PT55 438 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 OLFM4Q6UX06 510 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 COPS6Q7L5N1 327 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 KLRG1Q96E93 195 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 RBM17Q96I25 401 aaKnown RBP7.98□□□□□ -1.13
MARK3-216ENST00000558953 NLRP3Q96P20 1036 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 PSMD1Q99460 953 aa7.98□□□□□ -1.13
MARK3-216ENST00000558953 UTP14AQ9BVJ6 771 aaKnown RBP7.98□□□□□ -1.13
MARK3-216ENST00000558953 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
MARK3-216ENST00000558953 LAS1LQ9Y4W2 734 aaKnown RBP7.98□□□□□ -1.13
MARK3-216ENST00000558953 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.97□□□□□ -1.13
MARK3-216ENST00000558953 ARHGEF15O94989 841 aa7.97□□□□□ -1.13
MARK3-216ENST00000558953 ANXA1P04083 346 aa7.97□□□□□ -1.13
MARK3-216ENST00000558953 HOXB7P09629 217 aa7.97□□□□□ -1.13
MARK3-216ENST00000558953 AIMP1Q12904 312 aaKnown RBP7.97□□□□□ -1.13
MARK3-216ENST00000558953 XAGE3Q8WTP9 111 aa7.97□□□□□ -1.13
MARK3-216ENST00000558953 JDP2Q8WYK2 163 aa7.97□□□□□ -1.13
MARK3-216ENST00000558953 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
MARK3-216ENST00000558953 TMX4Q9H1E5 349 aaPredicted RBP7.97□□□□□ -1.13
MARK3-216ENST00000558953 LAMB2P55268 1798 aa7.97□□□□□ -1.13
MARK3-216ENST00000558953 SNED1Q8TER0 1413 aa7.96□□□□□ -1.13
MARK3-216ENST00000558953 HOXA2O43364 376 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 CCNYL3P0C7X3 344 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 CALD1Q05682 793 aaKnown RBP7.96□□□□□ -1.14
MARK3-216ENST00000558953 TCIRG1Q13488 830 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 KRT24Q2M2I5 525 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 LINC01559Q495D7 138 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 HDGFL1Q5TGJ6 251 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 NLRP10Q86W26 655 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 JMYQ8N9B5 988 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 WHAMMQ8TF30 809 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 SYMPKQ92797 1274 aaKnown RBP7.96□□□□□ -1.14
MARK3-216ENST00000558953 PSMG3-AS1Q96PY0 264 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 CHPF2Q9P2E5 772 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 DBF4Q9UBU7 674 aaPredicted RBP7.96□□□□□ -1.14
MARK3-216ENST00000558953 ZNF541Q9H0D2 1346 aa7.96□□□□□ -1.14
MARK3-216ENST00000558953 FZD9O00144 591 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 TCERG1O14776 1098 aaKnown RBP7.95□□□□□ -1.14
MARK3-216ENST00000558953 MSTNO14793 375 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 BBOX1O75936 387 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 ZIC2O95409 532 aaPredicted RBP7.95□□□□□ -1.14
MARK3-216ENST00000558953 SLURP2P0DP57 97 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 BMP2P12643 396 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 EIF6P56537 245 aaKnown RBP7.95□□□□□ -1.14
MARK3-216ENST00000558953 GNAI1P63096 354 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 RETREG3Q86VR2 466 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 LDHDQ86WU2 507 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 GPC2Q8N158 579 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 LARGE2Q8N3Y3 721 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 PLBD2Q8NHP8 589 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 BAP1Q92560 729 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 UNC93B1Q9H1C4 597 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 TAF1DQ9H5J8 278 aaPredicted RBP7.95□□□□□ -1.14
MARK3-216ENST00000558953 ZFAND3Q9H8U3 227 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 IFT57Q9NWB7 429 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 HYPKQ9NX55 129 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 TRMT112Q9UI30 125 aaKnown RBP7.95□□□□□ -1.14
MARK3-216ENST00000558953 HACL1Q9UJ83 578 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 ATP6V0A2Q9Y487 856 aa7.95□□□□□ -1.14
MARK3-216ENST00000558953 APAF1O14727 1248 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 UPP2O95045 317 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 ZNF853P0CG23 659 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 EPHX2P34913 555 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 RNFT1Q5M7Z0 435 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 DUSP27Q5VZP5 1158 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 DDX46Q7L014 1031 aaKnown RBP7.94□□□□□ -1.14
MARK3-216ENST00000558953 PNMA8AQ86V59 439 aaPredicted RBP7.94□□□□□ -1.14
MARK3-216ENST00000558953 SP8Q8IXZ3 490 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 CHMP4AQ9BY43 222 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 VPS33BQ9H267 617 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 MBIPQ9NS73 344 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 DNMT3LQ9UJW3 386 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 ABCC4O15439 1325 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 SH3TC1Q8TE82 1336 aa7.94□□□□□ -1.14
MARK3-216ENST00000558953 DDX60Q8IY21 1712 aaKnown RBP7.93□□□□□ -1.14
MARK3-216ENST00000558953 ADAMTSL1Q8N6G6 1762 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 PPIP5K2O43314 1243 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 MS4A1P11836 297 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
MARK3-216ENST00000558953 GUCA2AQ02747 115 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 EAPPQ56P03 285 aaPredicted RBP7.93□□□□□ -1.14
MARK3-216ENST00000558953 TMC4Q7Z404 712 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 NIM1KQ8IY84 436 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 ZNF511Q8NB15 262 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 SUPT20HQ8NEM7 779 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 NANOS1Q8WY41 292 aaKnown RBP7.93□□□□□ -1.14
MARK3-216ENST00000558953 ISCA1Q9BUE6 129 aa7.93□□□□□ -1.14
MARK3-216ENST00000558953 GJA3Q9Y6H8 435 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms