RNA–Protein interactions for RNA: ENST00000557771.5

RPGRIP1-213, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGRIP1, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-213ENST00000557771 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
RPGRIP1-213ENST00000557771 UGGT1Q9NYU2 1555 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 KRT32Q14532 448 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 RSRC2Q7L4I2 434 aaKnown RBP13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 MRPL44Q9H9J2 332 aaKnown RBP13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 GGCXP38435 758 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 AIMP1Q12904 312 aaKnown RBP13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 RNF217Q8TC41 542 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 L1RE1Q9UN81 338 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 MYOM1P52179 1685 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 REREQ9P2R6 1566 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 WAPLQ7Z5K2 1190 aa13.04□□□□□ -0.32
RPGRIP1-213ENST00000557771 FILIP1LQ4L180 1135 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 VSTM4Q8IW00 320 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 NOA1Q8NC60 698 aaKnown RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 NUP88Q99567 741 aaPredicted RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 ANKZF1Q9H8Y5 726 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 CPSF2Q9P2I0 782 aaKnown RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 FANCGO15287 622 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 PDCLQ13371 301 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 IPO7O95373 1038 aaKnown RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 PFKFB1P16118 471 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 SPECC1LQ69YQ0 1117 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 MICALCLQ6ZW33 695 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 IQCA1Q86XH1 822 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 ACRBPQ8NEB7 543 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 TBC1D31Q96DN5 1066 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 PCMTD1Q96MG8 357 aaPredicted RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 TRIM6Q9C030 488 aaPredicted RBP13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 JADE2Q9NQC1 790 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 GJB4Q9NTQ9 266 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 CDC42BPAQ5VT25 1732 aa13.03□□□□□ -0.32
RPGRIP1-213ENST00000557771 MAP2K7O14733 419 aa13.02□□□□□ -0.32
RPGRIP1-213ENST00000557771 FMNL3Q8IVF7 1028 aa13.02□□□□□ -0.32
RPGRIP1-213ENST00000557771 KCNG4Q8TDN1 519 aa13.02□□□□□ -0.32
RPGRIP1-213ENST00000557771 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.32
RPGRIP1-213ENST00000557771 IFT88Q13099 833 aa13.02□□□□□ -0.33
RPGRIP1-213ENST00000557771 DNAJC5BQ9UF47 199 aa13.02□□□□□ -0.33
RPGRIP1-213ENST00000557771 MAST1Q9Y2H9 1570 aa13.02□□□□□ -0.33
RPGRIP1-213ENST00000557771 KIAA1328Q86T90 577 aa13.02□□□□□ -0.33
RPGRIP1-213ENST00000557771 A0A0U1RQJ8 604 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 PI4KAP2A4QPH2 592 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 STX10O60499 249 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 ADALQ6DHV7 355 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 PI4KAP1Q8N8J0 262 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 IQGAP1P46940 1657 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 AMPHP49418 695 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 AP1ARQ63HQ0 302 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 ZNF589Q86UQ0 364 aaPredicted RBP13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 FMR1NBQ8N0W7 255 aaPredicted RBP13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 CHUKO15111 745 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 KIF4AO95239 1232 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 HAND2P61296 217 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 CCDC102BQ68D86 513 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 B4GALNT4Q76KP1 1039 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 NEUROD6Q96NK8 337 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 UBXN6Q9BZV1 441 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 AOX1Q06278 1338 aa13.01□□□□□ -0.33
RPGRIP1-213ENST00000557771 CFAP65Q6ZU64 1925 aaKnown RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 IRAK1P51617 712 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 NAP1L1P55209 391 aaKnown RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 CCDC121Q6ZUS5 278 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 EGFL6Q8IUX8 553 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 PSMB7Q99436 277 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 SALL3Q9BXA9 1300 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 EIF4E1BA6NMX2 242 aaKnown RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 PPP1R12AO14974 1030 aaPredicted RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 COBLO75128 1261 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 HPDP32754 393 aaPredicted RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 CCT6AP40227 531 aaKnown RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 ODF2Q5BJF6 829 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 MAP4K1Q92918 833 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 BAIAP2L1Q9UHR4 511 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 PBRM1Q86U86 1689 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 SRGAP2O75044 1071 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 HSP90AB2PQ58FF8 381 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
RPGRIP1-213ENST00000557771 JMYQ8N9B5 988 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 SSH3Q8TE77 659 aa13□□□□□ -0.33
RPGRIP1-213ENST00000557771 FCHSD1Q86WN1 690 aa12.99□□□□□ -0.33
RPGRIP1-213ENST00000557771 MYO6Q9UM54 1294 aa12.99□□□□□ -0.33
RPGRIP1-213ENST00000557771 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
RPGRIP1-213ENST00000557771 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
RPGRIP1-213ENST00000557771 TRDNQ13061 729 aa12.99□□□□□ -0.33
RPGRIP1-213ENST00000557771 TRIM29Q14134 588 aa12.99□□□□□ -0.33
RPGRIP1-213ENST00000557771 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms