RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 TMC4Q7Z404 712 aa16.49■□□□□ 0.23
EFCAB11-212ENST00000556639 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
EFCAB11-212ENST00000556639 TM6SF1Q9BZW5 370 aa16.49■□□□□ 0.23
EFCAB11-212ENST00000556639 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
EFCAB11-212ENST00000556639 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
EFCAB11-212ENST00000556639 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
EFCAB11-212ENST00000556639 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
EFCAB11-212ENST00000556639 CYP46A1Q9Y6A2 500 aa16.48■□□□□ 0.23
EFCAB11-212ENST00000556639 CHD4Q14839 1912 aa16.48■□□□□ 0.23
EFCAB11-212ENST00000556639 SLC16A10Q8TF71 515 aa16.48■□□□□ 0.23
EFCAB11-212ENST00000556639 EPB41L4AQ9HCS5 686 aaPredicted RBP16.48■□□□□ 0.23
EFCAB11-212ENST00000556639 LARGE1O95461 756 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 DOK7Q18PE1 504 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 NAA16Q6N069 864 aaPredicted RBP16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 NKX2-3Q8TAU0 364 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 E7EWF7 191 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 IL1R1P14778 569 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 NEK1Q96PY6 1258 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 LRRC2Q9BYS8 371 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 NBPF3Q9H094 633 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 C10orf71Q711Q0 1435 aa16.47■□□□□ 0.23
EFCAB11-212ENST00000556639 LAMA4Q16363 1823 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 PSDA5PKW4 1024 aaPredicted RBP16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 GSG1L2A8MUP6 293 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 RPS6KB1P23443 525 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 DDIT3P35638 169 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 SDR42E1Q8WUS8 393 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 RIOK1Q9BRS2 568 aaKnown RBP16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 PSMA5P28066 241 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 CHST3Q7LGC8 479 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 C7orf43Q8WVR3 580 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 INCENPQ9NQS7 918 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 SLC4A4Q9Y6R1 1079 aa16.46■□□□□ 0.23
EFCAB11-212ENST00000556639 SMIM22K7EJ46 135 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 DPEP1P16444 411 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 KCNA3P22001 575 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 DIXDC1Q155Q3 683 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 IFNL3Q8IZI9 196 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 MAGEB6P1A0A0J9YX57 407 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 CNKSR1Q969H4 720 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 ZC3H12CQ9C0D7 883 aaKnown RBP16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 KCNQ5Q9NR82 932 aa16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 AATFQ9NY61 560 aaKnown RBP eCLIP16.45■□□□□ 0.22
EFCAB11-212ENST00000556639 C21orf2O43822 256 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 MCM2P49736 904 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 TOB2Q14106 344 aaPredicted RBP16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 IMMTQ16891 758 aaKnown RBP16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 WDR66Q8TBY9 1149 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 TACC3Q9Y6A5 838 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 GTF2IP78347 998 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 KRT32Q14532 448 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 TBC1D10CQ8IV04 446 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 TPCN1Q9ULQ1 816 aa16.44■□□□□ 0.22
EFCAB11-212ENST00000556639 ZNF213O14771 459 aa16.43■□□□□ 0.22
EFCAB11-212ENST00000556639 LDHBP07195 334 aaKnown RBP16.43■□□□□ 0.22
EFCAB11-212ENST00000556639 DZIP1Q86YF9 867 aaKnown RBP16.43■□□□□ 0.22
EFCAB11-212ENST00000556639 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
EFCAB11-212ENST00000556639 TMX4Q9H1E5 349 aaPredicted RBP16.43■□□□□ 0.22
EFCAB11-212ENST00000556639 DBNDD1Q9H9R9 158 aa16.43■□□□□ 0.22
EFCAB11-212ENST00000556639 LIMCH1Q9UPQ0 1083 aa16.43■□□□□ 0.22
EFCAB11-212ENST00000556639 SALL1Q9NSC2 1324 aa16.43■□□□□ 0.22
EFCAB11-212ENST00000556639 CCDC88AQ3V6T2 1871 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 ZBTB22O15209 634 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 EVX2Q03828 476 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 CTDSPL2Q05D32 466 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 CUL4AQ13619 759 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 NBR1Q14596 966 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 ME3Q16798 604 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 MFSD14BQ5SR56 506 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 Q6ZUG5 572 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 NAPBQ9H115 298 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 GPHNQ9NQX3 736 aaPredicted RBP16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 UTRNP46939 3433 aa16.42■□□□□ 0.22
EFCAB11-212ENST00000556639 ST3GAL1Q11201 340 aa16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 NECAB1Q8N987 351 aa16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 MTFR1LQ9H019 292 aa16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 PKP1Q13835 747 aa16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 ALX1Q15699 326 aa16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 CHMP5Q9NZZ3 219 aa16.41■□□□□ 0.22
EFCAB11-212ENST00000556639 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
EFCAB11-212ENST00000556639 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
EFCAB11-212ENST00000556639 TDO2P48775 406 aa16.4■□□□□ 0.22
EFCAB11-212ENST00000556639 EXOSC10Q01780 885 aaKnown RBP16.4■□□□□ 0.22
EFCAB11-212ENST00000556639 DHX32Q7L7V1 743 aaKnown RBP16.4■□□□□ 0.22
EFCAB11-212ENST00000556639 CERS5Q8N5B7 392 aa16.4■□□□□ 0.22
EFCAB11-212ENST00000556639 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
EFCAB11-212ENST00000556639 BAZ2AQ9UIF9 1905 aaKnown RBP16.4■□□□□ 0.22
EFCAB11-212ENST00000556639 F8W031 263 aaPredicted RBP16.39■□□□□ 0.21
EFCAB11-212ENST00000556639 GNAT2P19087 354 aa16.39■□□□□ 0.21
EFCAB11-212ENST00000556639 AOC3Q16853 763 aa16.39■□□□□ 0.21
EFCAB11-212ENST00000556639 CCDC83Q8IWF9 413 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms