RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 ACAD11Q709F0 780 aa8.01□□□□□ -1.13
ATXN3-233ENST00000555816 AGGF1Q8N302 714 aaeCLIP8.01□□□□□ -1.13
ATXN3-233ENST00000555816 HELQQ8TDG4 1101 aa8.01□□□□□ -1.13
ATXN3-233ENST00000555816 FAM46AQ96IP4 442 aaKnown RBP8.01□□□□□ -1.13
ATXN3-233ENST00000555816 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
ATXN3-233ENST00000555816 H3BRJ5 948 aa8□□□□□ -1.13
ATXN3-233ENST00000555816 CES1P23141 567 aa8□□□□□ -1.13
ATXN3-233ENST00000555816 KIAA1211Q6ZU35 1233 aa8□□□□□ -1.13
ATXN3-233ENST00000555816 CLEC10AQ8IUN9 316 aa8□□□□□ -1.13
ATXN3-233ENST00000555816 TMEM63CQ9P1W3 806 aa8□□□□□ -1.13
ATXN3-233ENST00000555816 NCOA1Q15788 1441 aa8□□□□□ -1.13
ATXN3-233ENST00000555816 ZNF335Q9H4Z2 1342 aaPredicted RBP8□□□□□ -1.13
ATXN3-233ENST00000555816 PREX1Q8TCU6 1659 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-233ENST00000555816 CYP2E1P05181 493 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-233ENST00000555816 EPHA1P21709 976 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 MZF1P28698 734 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-233ENST00000555816 ARL4DP49703 201 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 ANKRD34AQ69YU3 496 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 ARMC10Q8N2F6 343 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 UTP4Q969X6 686 aaKnown RBP7.99□□□□□ -1.13
ATXN3-233ENST00000555816 MYRFLQ96LU7 910 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 SIGLEC1Q9BZZ2 1709 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 CNTLNQ9NXG0 1405 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 SEPT3Q9UH03 358 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 FER1L4A9Z1Z3 1794 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
ATXN3-233ENST00000555816 SETD1BQ9UPS6 1966 aaKnown RBP7.99□□□□□ -1.13
ATXN3-233ENST00000555816 ZMYM3Q14202 1370 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 PPP1R15AO75807 674 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-233ENST00000555816 WISP1O95388 367 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 NFIAQ12857 509 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 RNF208Q9H0X6 261 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 SH2B1Q9NRF2 756 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-233ENST00000555816 DZANK1Q9NVP4 752 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 KCNK4Q9NYG8 393 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 CNTN3Q9P232 1028 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 SLAIN2Q9P270 581 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 HIF3AQ9Y2N7 669 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 MLH3Q9UHC1 1453 aa7.98□□□□□ -1.13
ATXN3-233ENST00000555816 EEA1Q15075 1411 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 MEGF11A6BM72 1044 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 KIAA1324LA8MWY0 1029 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-233ENST00000555816 PDE2AO00408 941 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-233ENST00000555816 TOM1O60784 492 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 HSPA1LP34931 641 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 GRIK1P39086 918 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 USP5P45974 858 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 EHHADHQ08426 723 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 RNF43Q68DV7 783 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 TXNDC11Q6PKC3 985 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 TMEM102Q8N9M5 508 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-233ENST00000555816 EDEM1Q92611 657 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 KLHDC7BQ96G42 594 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 DBNDD2Q9BQY9 259 aa7.97□□□□□ -1.13
ATXN3-233ENST00000555816 NPATQ14207 1427 aa7.96□□□□□ -1.13
ATXN3-233ENST00000555816 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.14
ATXN3-233ENST00000555816 NFKBIEO00221 500 aa7.96□□□□□ -1.14
ATXN3-233ENST00000555816 SART1O43290 800 aaKnown RBP7.96□□□□□ -1.14
ATXN3-233ENST00000555816 PDGFAP04085 211 aa7.96□□□□□ -1.14
ATXN3-233ENST00000555816 DNM1Q05193 864 aaKnown RBP7.96□□□□□ -1.14
ATXN3-233ENST00000555816 FAM83CQ9BQN1 747 aa7.96□□□□□ -1.14
ATXN3-233ENST00000555816 MTMR7Q9Y216 660 aa7.96□□□□□ -1.14
ATXN3-233ENST00000555816 AGLP35573 1532 aa7.96□□□□□ -1.14
ATXN3-233ENST00000555816 CDK13Q14004 1512 aaKnown RBP7.96□□□□□ -1.14
ATXN3-233ENST00000555816 TROQ12816 1431 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-233ENST00000555816 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 NPR3P17342 541 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 SSTR4P31391 388 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 ATCAYQ86WG3 371 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 FAM20CQ8IXL6 584 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 C1orf127Q8N9H9 656 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 FOXD4L4Q8WXT5 416 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-233ENST00000555816 CARD10Q9BWT7 1032 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 C7orf69Q9H7B7 122 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 CLIP1P30622 1438 aa7.95□□□□□ -1.14
ATXN3-233ENST00000555816 ARHGAP5Q13017 1502 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 REREQ9P2R6 1566 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 CDC25BP30305 580 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 EIF1AXP47813 144 aaKnown RBP7.94□□□□□ -1.14
ATXN3-233ENST00000555816 C8orf34Q49A92 452 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 ADAMTSL4Q6UY14 1074 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-233ENST00000555816 ZDHHC13Q8IUH4 622 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 BSNDQ8WZ55 320 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 GGNBP2Q9H3C7 697 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 SOX13Q9UN79 622 aa7.94□□□□□ -1.14
ATXN3-233ENST00000555816 KDM5CP41229 1560 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 ADAM11O75078 769 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 FAM13AO94988 1023 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 EDN3P14138 238 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 SSFA2P28290 1259 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 C19orf57Q0VDD7 668 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 MCTP1Q6DN14 999 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 TRIM42Q8IWZ5 723 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 GTF3C2Q8WUA4 911 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-233ENST00000555816 NXPE3Q969Y0 559 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 SOX17Q9H6I2 414 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-233ENST00000555816 KANSL3Q9P2N6 904 aa7.93□□□□□ -1.14
ATXN3-233ENST00000555816 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms