RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 RNF123Q5XPI4 1314 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 FMNL1O95466 1100 aaPredicted RBP9.17□□□□□ -0.94
GPHN-208ENST00000555503 MYL6BP14649 208 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 GPTP24298 496 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 CTHP32929 405 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 CLDN10P78369 228 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 FKBP4Q02790 459 aaKnown RBP eCLIP9.17□□□□□ -0.94
GPHN-208ENST00000555503 KCNH2Q12809 1159 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 CLEC4GQ6UXB4 293 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 TPTE2Q6XPS3 522 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 LRCH3Q96II8 777 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 THUMPD2Q9BTF0 503 aaKnown RBP9.17□□□□□ -0.94
GPHN-208ENST00000555503 TAF1DQ9H5J8 278 aaPredicted RBP9.17□□□□□ -0.94
GPHN-208ENST00000555503 RRP7AQ9Y3A4 280 aaKnown RBP9.17□□□□□ -0.94
GPHN-208ENST00000555503 PCDHB9Q9Y5E1 797 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 MYH3P11055 1940 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 AKAP11Q9UKA4 1901 aa9.17□□□□□ -0.94
GPHN-208ENST00000555503 THSD7BQ9C0I4 1608 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 SNED1Q8TER0 1413 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 IQCA1LA6NCM1 817 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 TCERG1O14776 1098 aaKnown RBP9.16□□□□□ -0.94
GPHN-208ENST00000555503 DKK1O94907 266 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 ATP1A2P50993 1020 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 TAF7Q15545 349 aaPredicted RBP9.16□□□□□ -0.94
GPHN-208ENST00000555503 TTLL7Q6ZT98 887 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 LDHDQ86WU2 507 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 NPAS4Q8IUM7 802 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
GPHN-208ENST00000555503 LRRC37AA6NMS7 1700 aa9.16□□□□□ -0.94
GPHN-208ENST00000555503 CNTNAP1P78357 1384 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 PSME4Q14997 1843 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 UBN2Q6ZU65 1347 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 PASKQ96RG2 1323 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 FOXN1O15353 648 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 IARSP41252 1262 aaKnown RBP9.15□□□□□ -0.94
GPHN-208ENST00000555503 SCUBE3Q8IX30 993 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 SIX5Q8N196 739 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 SYNE4Q8N205 404 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 EVA1BQ9NVM1 165 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.15□□□□□ -0.94
GPHN-208ENST00000555503 BIN2Q9UBW5 565 aaPredicted RBP9.15□□□□□ -0.94
GPHN-208ENST00000555503 EGFL7Q9UHF1 273 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 GJA3Q9Y6H8 435 aa9.15□□□□□ -0.94
GPHN-208ENST00000555503 MAP3K15Q6ZN16 1313 aa9.14□□□□□ -0.95
GPHN-208ENST00000555503 SCN9AQ15858 1988 aa9.14□□□□□ -0.95
GPHN-208ENST00000555503 KLRG2A4D1S0 409 aaPredicted RBP9.14□□□□□ -0.95
GPHN-208ENST00000555503 EPHX2P34913 555 aa9.14□□□□□ -0.95
GPHN-208ENST00000555503 MSS51Q4VC12 460 aa9.14□□□□□ -0.95
GPHN-208ENST00000555503 VARS2Q5ST30 1063 aaKnown RBP9.14□□□□□ -0.95
GPHN-208ENST00000555503 MAP1SQ66K74 1059 aaPredicted RBP9.14□□□□□ -0.95
GPHN-208ENST00000555503 KIF6Q6ZMV9 814 aa9.14□□□□□ -0.95
GPHN-208ENST00000555503 RPGRQ92834 1020 aaKnown RBP9.14□□□□□ -0.95
GPHN-208ENST00000555503 ZNF594Q96JF6 807 aaPredicted RBP9.14□□□□□ -0.95
GPHN-208ENST00000555503 HACL1Q9UJ83 578 aa9.14□□□□□ -0.95
GPHN-208ENST00000555503 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
GPHN-208ENST00000555503 TNRC18O15417 2968 aaPredicted RBP9.13□□□□□ -0.95
GPHN-208ENST00000555503 ANKRD33BA6NCL7 494 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 HTATSF1O43719 755 aaKnown RBP9.13□□□□□ -0.95
GPHN-208ENST00000555503 NR1I2O75469 434 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 ITGBL1O95965 494 aaPredicted RBP9.13□□□□□ -0.95
GPHN-208ENST00000555503 NEFMP07197 916 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 ALDH1B1P30837 517 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 SCNN1AP37088 669 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 VEGFBP49765 207 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 TAS1R3Q7RTX0 852 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 RTKN2Q8IZC4 609 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 ADAM32Q8TC27 787 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 GIPC2Q8TF65 315 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 NYXQ9GZU5 481 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 COL4A1P02462 1669 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 RIC1Q4ADV7 1423 aa9.13□□□□□ -0.95
GPHN-208ENST00000555503 TK2O00142 265 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 FZD9O00144 591 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 DXOO77932 396 aaKnown RBP9.12□□□□□ -0.95
GPHN-208ENST00000555503 ANXA1P04083 346 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 EIF4A1P60842 406 aaKnown RBP9.12□□□□□ -0.95
GPHN-208ENST00000555503 FMR1Q06787 632 aaKnown RBP eCLIP9.12□□□□□ -0.95
GPHN-208ENST00000555503 GRM1Q13255 1194 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 NFE2L2Q16236 605 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 OCLNQ16625 522 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 CRY2Q49AN0 593 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 SUSD4Q5VX71 490 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 MRPL50Q8N5N7 158 aaKnown RBP9.12□□□□□ -0.95
GPHN-208ENST00000555503 JDP2Q8WYK2 163 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 CXXC1Q9P0U4 656 aaPredicted RBP9.12□□□□□ -0.95
GPHN-208ENST00000555503 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 DUOX1Q9NRD9 1551 aa9.12□□□□□ -0.95
GPHN-208ENST00000555503 MAPK8IP3Q9UPT6 1336 aa9.11□□□□□ -0.95
GPHN-208ENST00000555503 PPEF1O14829 653 aaPredicted RBP9.11□□□□□ -0.95
GPHN-208ENST00000555503 ZBTB7BO15156 539 aaPredicted RBP9.11□□□□□ -0.95
GPHN-208ENST00000555503 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
GPHN-208ENST00000555503 CNTROBQ8N137 903 aa9.11□□□□□ -0.95
GPHN-208ENST00000555503 GPC2Q8N158 579 aa9.11□□□□□ -0.95
GPHN-208ENST00000555503 AIDAQ96BJ3 306 aa9.11□□□□□ -0.95
GPHN-208ENST00000555503 PLEKHF1Q96S99 279 aa9.11□□□□□ -0.95
GPHN-208ENST00000555503 NUDT12Q9BQG2 462 aa9.11□□□□□ -0.95
GPHN-208ENST00000555503 ABT1Q9ULW3 272 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms