RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
PRKCH-211ENST00000555082 FLAD1Q8NFF5 587 aa11.69□□□□□ -0.54
PRKCH-211ENST00000555082 GRAPLQ8TC17 118 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-211ENST00000555082 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
PRKCH-211ENST00000555082 GTF2F1P35269 517 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRKCH-211ENST00000555082 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
PRKCH-211ENST00000555082 KIAA1524Q8TCG1 905 aa11.68□□□□□ -0.54
PRKCH-211ENST00000555082 PIH1D3Q9NQM4 214 aaKnown RBP11.68□□□□□ -0.54
PRKCH-211ENST00000555082 HMG20BQ9P0W2 317 aa11.68□□□□□ -0.54
PRKCH-211ENST00000555082 SNX14Q9Y5W7 946 aa11.68□□□□□ -0.54
PRKCH-211ENST00000555082 F13A1P00488 732 aa11.68□□□□□ -0.54
PRKCH-211ENST00000555082 KCNJ4P48050 445 aa11.68□□□□□ -0.54
PRKCH-211ENST00000555082 NAA30Q147X3 362 aaPredicted RBP11.68□□□□□ -0.54
PRKCH-211ENST00000555082 CRY2Q49AN0 593 aa11.68□□□□□ -0.54
PRKCH-211ENST00000555082 LSG1Q9H089 658 aaKnown RBP11.68□□□□□ -0.54
PRKCH-211ENST00000555082 WWC3Q9ULE0 1092 aa11.68□□□□□ -0.54
PRKCH-211ENST00000555082 HSPA4P34932 840 aa11.67□□□□□ -0.54
PRKCH-211ENST00000555082 CHAF1AQ13111 956 aaPredicted RBP11.67□□□□□ -0.54
PRKCH-211ENST00000555082 UTP14CQ5TAP6 766 aaKnown RBP11.67□□□□□ -0.54
PRKCH-211ENST00000555082 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
PRKCH-211ENST00000555082 ANKIB1Q9P2G1 1089 aa11.67□□□□□ -0.54
PRKCH-211ENST00000555082 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
PRKCH-211ENST00000555082 LAMB2P55268 1798 aa11.67□□□□□ -0.54
PRKCH-211ENST00000555082 LRMPQ12912 555 aa11.67□□□□□ -0.54
PRKCH-211ENST00000555082 IDH1O75874 414 aaKnown RBP11.66□□□□□ -0.54
PRKCH-211ENST00000555082 CHRNA5P30532 468 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 NECAB1Q8N987 351 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 FAM84BQ96KN1 310 aaPredicted RBP11.66□□□□□ -0.54
PRKCH-211ENST00000555082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.66□□□□□ -0.54
PRKCH-211ENST00000555082 CASTP20810 708 aaKnown RBP11.66□□□□□ -0.54
PRKCH-211ENST00000555082 GJB2P29033 226 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 GPSM2P81274 684 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 COL9A3Q14050 684 aaPredicted RBP11.66□□□□□ -0.54
PRKCH-211ENST00000555082 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 LUZP1Q86V48 1076 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 DRC7Q8IY82 874 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 CKAP2LQ8IYA6 745 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 ZBTB7AO95365 584 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 SPATA5Q8NB90 893 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 TMEM87AQ8NBN3 555 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.54
PRKCH-211ENST00000555082 RBM17Q96I25 401 aaKnown RBP11.66□□□□□ -0.54
PRKCH-211ENST00000555082 C16orf45Q96MC5 204 aaPredicted RBP11.66□□□□□ -0.54
PRKCH-211ENST00000555082 FUCA2Q9BTY2 467 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 NRBP1Q9UHY1 535 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 LIMCH1Q9UPQ0 1083 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 TAF6LQ9Y6J9 622 aa11.66□□□□□ -0.54
PRKCH-211ENST00000555082 LETM1O95202 739 aaPredicted RBP11.65□□□□□ -0.54
PRKCH-211ENST00000555082 ARID4AP29374 1257 aaPredicted RBP11.65□□□□□ -0.54
PRKCH-211ENST00000555082 OSBP2Q969R2 916 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 BRIP1Q9BX63 1249 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 ZNF804BA4D1E1 1349 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 M0R2C6 588 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 SRGNP10124 158 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 UBE4AQ14139 1066 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 WASHC4Q2M389 1173 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 PRPF40BQ6NWY9 871 aaKnown RBP11.65□□□□□ -0.54
PRKCH-211ENST00000555082 VPS37DQ86XT2 251 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.54
PRKCH-211ENST00000555082 CCDC186Q7Z3E2 898 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
PRKCH-211ENST00000555082 TTC14Q96N46 770 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 RAD50Q92878 1312 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 RNF113AO15541 343 aaKnown RBP11.64□□□□□ -0.55
PRKCH-211ENST00000555082 LIG1P18858 919 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 ADCK5Q3MIX3 580 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 PUS7LQ9H0K6 701 aaKnown RBP11.64□□□□□ -0.55
PRKCH-211ENST00000555082 MTMR6Q9Y217 621 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
PRKCH-211ENST00000555082 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 UTRNP46939 3433 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
PRKCH-211ENST00000555082 KLRG2A4D1S0 409 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 UQCRFS1P1P0C7P4 283 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 HMGB2P26583 209 aaKnown RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 SLC9C2Q5TAH2 1124 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 JAKMIP1Q96N16 626 aaKnown RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 GTPBP4Q9BZE4 634 aaKnown RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 ABCF2Q9UG63 623 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 RBM8AQ9Y5S9 174 aaKnown RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 MAST3O60307 1309 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 UFL1O94874 794 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 ZMYM1Q5SVZ6 1142 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 C2CD5Q86YS7 1000 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 ZNF592Q92610 1267 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 MED23Q9ULK4 1368 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 HIP1O00291 1037 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 CCDC192P0DO97 292 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 R3HDM1Q15032 1099 aaKnown RBP11.63□□□□□ -0.55
PRKCH-211ENST00000555082 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 TCEANC2Q96MN5 208 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 ANKRD2Q9GZV1 360 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
PRKCH-211ENST00000555082 PPEF1O14829 653 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms