RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 SMG8Q8ND04 991 aaKnown RBP6.59□□□□□ -1.35
CFAP54-207ENST00000554821 GIMAP7Q8NHV1 300 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 YIPF2Q9BWQ6 316 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 LATS2Q9NRM7 1088 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 TIMELESSQ9UNS1 1208 aa6.59□□□□□ -1.35
CFAP54-207ENST00000554821 LOC100289279A0A1B0GTE1 492 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 GRIK1P39086 918 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 CPSF6Q16630 551 aaKnown RBP eCLIP6.58□□□□□ -1.36
CFAP54-207ENST00000554821 RPS26P11Q5JNZ5 115 aaPredicted RBP6.58□□□□□ -1.36
CFAP54-207ENST00000554821 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 PRPF40BQ6NWY9 871 aaKnown RBP6.58□□□□□ -1.36
CFAP54-207ENST00000554821 FAM20CQ8IXL6 584 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 TCF12Q99081 682 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 DBNDD2Q9BQY9 259 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 USP26Q9BXU7 913 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 TMPRSS13Q9BYE2 586 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 EHD4Q9H223 541 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 DCTN4Q9UJW0 460 aa6.58□□□□□ -1.36
CFAP54-207ENST00000554821 POLR3DP05423 398 aaPredicted RBP6.57□□□□□ -1.36
CFAP54-207ENST00000554821 ITPKAP23677 461 aa6.57□□□□□ -1.36
CFAP54-207ENST00000554821 GSTM4Q03013 218 aa6.57□□□□□ -1.36
CFAP54-207ENST00000554821 NFIAQ12857 509 aa6.57□□□□□ -1.36
CFAP54-207ENST00000554821 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
CFAP54-207ENST00000554821 INTS5Q6P9B9 1019 aaKnown RBP6.57□□□□□ -1.36
CFAP54-207ENST00000554821 FAM83CQ9BQN1 747 aa6.57□□□□□ -1.36
CFAP54-207ENST00000554821 EIF1AYO14602 144 aaKnown RBP6.56□□□□□ -1.36
CFAP54-207ENST00000554821 B3GALT4O96024 378 aa6.56□□□□□ -1.36
CFAP54-207ENST00000554821 BMP3P12645 472 aa6.56□□□□□ -1.36
CFAP54-207ENST00000554821 PREPP48147 710 aa6.56□□□□□ -1.36
CFAP54-207ENST00000554821 AP3B2Q13367 1082 aa6.56□□□□□ -1.36
CFAP54-207ENST00000554821 CCDC74AQ96AQ1 378 aa6.56□□□□□ -1.36
CFAP54-207ENST00000554821 C7orf69Q9H7B7 122 aa6.56□□□□□ -1.36
CFAP54-207ENST00000554821 PPP4R2Q9NY27 417 aa6.56□□□□□ -1.36
CFAP54-207ENST00000554821 GPR182O15218 404 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 TIAF1O95411 115 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 XRCC5P13010 732 aaKnown RBP6.55□□□□□ -1.36
CFAP54-207ENST00000554821 KCNA1Q09470 495 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 ORC1Q13415 861 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 BEND4Q6ZU67 534 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 C12orf50Q8NA57 414 aaPredicted RBP6.55□□□□□ -1.36
CFAP54-207ENST00000554821 CORO1BQ9BR76 489 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 KCNF1Q9H3M0 494 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 ZNF576Q9H609 170 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 NPHS2Q9NP85 383 aa6.55□□□□□ -1.36
CFAP54-207ENST00000554821 BIN2Q9UBW5 565 aaPredicted RBP6.55□□□□□ -1.36
CFAP54-207ENST00000554821 OAS3Q9Y6K5 1087 aaKnown RBP6.55□□□□□ -1.36
CFAP54-207ENST00000554821 SYNGAP1Q96PV0 1343 aa6.54□□□□□ -1.36
CFAP54-207ENST00000554821 GADD45BO75293 160 aaPredicted RBP6.54□□□□□ -1.36
CFAP54-207ENST00000554821 IGHA2P01877 340 aa6.54□□□□□ -1.36
CFAP54-207ENST00000554821 GRIA4P48058 902 aa6.54□□□□□ -1.36
CFAP54-207ENST00000554821 LCE5AQ5TCM9 118 aa6.54□□□□□ -1.36
CFAP54-207ENST00000554821 CSRNP1Q96S65 589 aa6.54□□□□□ -1.36
CFAP54-207ENST00000554821 NRSN2Q9GZP1 204 aa6.54□□□□□ -1.36
CFAP54-207ENST00000554821 NLRP2Q9NX02 1062 aa6.54□□□□□ -1.36
CFAP54-207ENST00000554821 METTL12A8MUP2 240 aa6.53□□□□□ -1.36
CFAP54-207ENST00000554821 MAP4P27816 1152 aaKnown RBP6.53□□□□□ -1.36
CFAP54-207ENST00000554821 CD97P48960 835 aa6.53□□□□□ -1.36
CFAP54-207ENST00000554821 POU4F3Q15319 338 aa6.53□□□□□ -1.36
CFAP54-207ENST00000554821 ZSCAN29Q8IWY8 852 aaPredicted RBP6.53□□□□□ -1.36
CFAP54-207ENST00000554821 TRIM42Q8IWZ5 723 aa6.53□□□□□ -1.36
CFAP54-207ENST00000554821 NIF3L1Q9GZT8 377 aa6.53□□□□□ -1.36
CFAP54-207ENST00000554821 KIAA1324LA8MWY0 1029 aaPredicted RBP6.52□□□□□ -1.37
CFAP54-207ENST00000554821 USP11P51784 963 aa6.52□□□□□ -1.37
CFAP54-207ENST00000554821 GP2P55259 537 aaKnown RBP6.52□□□□□ -1.37
CFAP54-207ENST00000554821 ZNF423Q2M1K9 1284 aa6.52□□□□□ -1.37
CFAP54-207ENST00000554821 USPL1Q5W0Q7 1092 aa6.52□□□□□ -1.37
CFAP54-207ENST00000554821 PAOXQ6QHF9 649 aa6.52□□□□□ -1.37
CFAP54-207ENST00000554821 ZDHHC13Q8IUH4 622 aa6.52□□□□□ -1.37
CFAP54-207ENST00000554821 FBF1Q8TES7 1133 aa6.52□□□□□ -1.37
CFAP54-207ENST00000554821 METTL22Q9BUU2 404 aaPredicted RBP6.52□□□□□ -1.37
CFAP54-207ENST00000554821 ABCB6Q9NP58 842 aa6.52□□□□□ -1.37
CFAP54-207ENST00000554821 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 HMX2A2RU54 273 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 ADH5P11766 374 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 MAOBP27338 520 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 MAPK1P28482 360 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 RXRBP28702 533 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 PPP2R3AQ06190 1150 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 SOX4Q06945 474 aaPredicted RBP6.51□□□□□ -1.37
CFAP54-207ENST00000554821 SPRED3Q2MJR0 410 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 HGSNATQ68CP4 663 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 TMC7Q7Z402 723 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 SRCIN1Q9C0H9 1055 aa6.51□□□□□ -1.37
CFAP54-207ENST00000554821 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.5□□□□□ -1.37
CFAP54-207ENST00000554821 FAM95CA0A1B0GW59 222 aa6.5□□□□□ -1.37
CFAP54-207ENST00000554821 TREHO43280 583 aa6.5□□□□□ -1.37
CFAP54-207ENST00000554821 SSTR4P31391 388 aa6.5□□□□□ -1.37
CFAP54-207ENST00000554821 MAP7Q14244 749 aa6.5□□□□□ -1.37
CFAP54-207ENST00000554821 C2CD4AQ8NCU7 369 aaPredicted RBP6.5□□□□□ -1.37
CFAP54-207ENST00000554821 EZH1Q92800 747 aaPredicted RBP6.5□□□□□ -1.37
CFAP54-207ENST00000554821 RAD18Q9NS91 495 aa6.5□□□□□ -1.37
CFAP54-207ENST00000554821 ATG3Q9NT62 314 aa6.5□□□□□ -1.37
CFAP54-207ENST00000554821 PLCB3Q01970 1234 aa6.49□□□□□ -1.37
CFAP54-207ENST00000554821 GRM2Q14416 872 aa6.49□□□□□ -1.37
CFAP54-207ENST00000554821 SGO2Q562F6 1265 aa6.49□□□□□ -1.37
CFAP54-207ENST00000554821 KRT82Q9NSB4 513 aa6.49□□□□□ -1.37
CFAP54-207ENST00000554821 GIPC1O14908 333 aa6.48□□□□□ -1.37
CFAP54-207ENST00000554821 DLGAP3O95886 979 aa6.48□□□□□ -1.37
CFAP54-207ENST00000554821 CYP27A1Q02318 531 aa6.48□□□□□ -1.37
CFAP54-207ENST00000554821 DSC3Q14574 896 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms