RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 COX20Q5RI15 118 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 KANK3Q6NY19 840 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 BEND7Q8N7W2 519 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-228ENST00000554592 TNFRSF25Q93038 417 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 COL26A1Q96A83 441 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 SPATA31A5Q5VU36 1347 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 SPATA31A7Q8IWB4 1347 aa7.23□□□□□ -1.25
ATXN3-228ENST00000554592 PLEKHH1Q9ULM0 1364 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 DISP2A7MBM2 1401 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 TNS3Q68CZ2 1445 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 ELOA3CA0A087WX78 387 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-228ENST00000554592 ELOA3DA6NLF2 546 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-228ENST00000554592 ADARB2-AS1A8MUL3 147 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 TRIM37O94972 964 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 DGKGP49619 791 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 KCNA1Q09470 495 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 RGL3Q3MIN7 710 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 ELOA3BQ3SY89 546 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 PHLDB3Q6NSJ2 640 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 CHSY3Q70JA7 882 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 RAB44Q7Z6P3 723 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-228ENST00000554592 ELOA3Q8NG57 546 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 GSX2Q9BZM3 304 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 SAP130Q9H0E3 1048 aa7.22□□□□□ -1.25
ATXN3-228ENST00000554592 PPP1R1BQ9UD71 204 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-228ENST00000554592 TECPR2O15040 1411 aa7.21□□□□□ -1.25
ATXN3-228ENST00000554592 OPLAHO14841 1288 aa7.21□□□□□ -1.26
ATXN3-228ENST00000554592 KCNQ2O43526 872 aa7.21□□□□□ -1.26
ATXN3-228ENST00000554592 FAM26DQ5JW98 314 aa7.21□□□□□ -1.26
ATXN3-228ENST00000554592 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
ATXN3-228ENST00000554592 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
ATXN3-228ENST00000554592 PARD3Q8TEW0 1356 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 CDC42BPGQ6DT37 1551 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 PHF20L1A8MW92 1017 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 MICAL2O94851 1124 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 IDH3AP50213 366 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 PDE3BQ13370 1112 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 VTI1AQ96AJ9 217 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 C14orf93Q9H972 538 aaKnown RBP7.2□□□□□ -1.26
ATXN3-228ENST00000554592 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.2□□□□□ -1.26
ATXN3-228ENST00000554592 STARD13Q9Y3M8 1113 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
ATXN3-228ENST00000554592 SPHKAPQ2M3C7 1700 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 TNFRSF10BO14763 440 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 ITGB2P05107 769 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 COL8A1P27658 744 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 SSFA2P28290 1259 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 IFT43Q96FT9 208 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 GZF1Q9H116 711 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-228ENST00000554592 PRDM11Q9NQV5 511 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 MKL2Q9ULH7 1088 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 GPRASP1Q5JY77 1395 aa7.19□□□□□ -1.26
ATXN3-228ENST00000554592 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.18□□□□□ -1.26
ATXN3-228ENST00000554592 PATL2C9JE40 543 aaKnown RBP7.18□□□□□ -1.26
ATXN3-228ENST00000554592 AMPD1P23109 780 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 COL9A3Q14050 684 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-228ENST00000554592 ETFBKMTQ8IXQ9 262 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 BHMTQ93088 406 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 SUV39H2Q9H5I1 410 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 EFCC1Q9HA90 598 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 RRAGCQ9HB90 399 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 C11orf16Q9NQ32 467 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 POGKQ9P215 609 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 CLTCL1P53675 1640 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 USP32Q8NFA0 1604 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 SPATA31A1Q5TZJ5 1347 aa7.18□□□□□ -1.26
ATXN3-228ENST00000554592 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
ATXN3-228ENST00000554592 YTHDC2Q9H6S0 1430 aaKnown RBP7.18□□□□□ -1.26
ATXN3-228ENST00000554592 ATP2B4P23634 1241 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 ARSDP51689 593 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 EVA1CP58658 441 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 CCINQ13939 588 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 SAFB2Q14151 953 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-228ENST00000554592 B4GALNT3Q6L9W6 998 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 GPAT2Q6NUI2 795 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 C16orf46Q6P387 395 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 TREML1Q86YW5 311 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 NINLQ9Y2I6 1382 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
ATXN3-228ENST00000554592 NRXN1Q9ULB1 1477 aa7.17□□□□□ -1.26
ATXN3-228ENST00000554592 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
ATXN3-228ENST00000554592 EGFRP00533 1210 aa7.16□□□□□ -1.26
ATXN3-228ENST00000554592 ADH7P40394 386 aa7.16□□□□□ -1.26
ATXN3-228ENST00000554592 NAA30Q147X3 362 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-228ENST00000554592 C20orf204Q6ZNR8 217 aa7.16□□□□□ -1.26
ATXN3-228ENST00000554592 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
ATXN3-228ENST00000554592 ZFATQ9P243 1243 aa7.16□□□□□ -1.26
ATXN3-228ENST00000554592 USP20Q9Y2K6 914 aa7.16□□□□□ -1.26
ATXN3-228ENST00000554592 IVNS1ABPQ9Y6Y0 642 aa7.16□□□□□ -1.26
ATXN3-228ENST00000554592 GNB5O14775 395 aa7.15□□□□□ -1.26
ATXN3-228ENST00000554592 SCNN1AP37088 669 aa7.15□□□□□ -1.26
ATXN3-228ENST00000554592 NEUROD1Q13562 356 aa7.15□□□□□ -1.26
ATXN3-228ENST00000554592 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
ATXN3-228ENST00000554592 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.26
ATXN3-228ENST00000554592 TRIM11Q96F44 468 aa7.15□□□□□ -1.26
ATXN3-228ENST00000554592 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms