RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 C16orf71Q8IYS4 520 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-206ENST00000554429 TTLL6Q8N841 843 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 GIPC2Q8TF65 315 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 TSPAN18Q96SJ8 248 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 ARHGEF10LQ9HCE6 1279 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 FRMD4BQ9Y2L6 1034 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 ZNF609O15014 1411 aa3.37□□□□□ -1.87
PRPF39-206ENST00000554429 GOLIM4O00461 696 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 RRP9O43818 475 aaKnown RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 IL6STP40189 918 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 RGS19P49795 217 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 TAGLNQ01995 201 aaKnown RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 C6orf132Q5T0Z8 1188 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 SAMD7Q7Z3H4 446 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 SLF2Q8IX21 1173 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 Q8N3U1 123 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 SPACA7Q96KW9 195 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 VPS33BQ9H267 617 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 RNF181Q9P0P0 153 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 NRBP1Q9UHY1 535 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 DUOX1Q9NRD9 1551 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 PER1O15534 1290 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 HTATSF1O43719 755 aaKnown RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 SERPINB2P05120 415 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 IGBP1P78318 339 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 CC2D1BQ5T0F9 858 aaKnown RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 DDX46Q7L014 1031 aaKnown RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 TTC30BQ8N4P2 665 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 LNPKQ9C0E8 428 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 RRAGCQ9HB90 399 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 SRP68Q9UHB9 627 aaKnown RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 FBXO9Q9UK97 447 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 ZNF646O15015 1829 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 KIF7Q2M1P5 1343 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 RASSF10A6NK89 507 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 CD2BP2O95400 341 aaKnown RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 PTPROQ16827 1216 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 CSPP1Q1MSJ5 1256 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 COL13A1Q5TAT6 717 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-206ENST00000554429 USPL1Q5W0Q7 1092 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 SMIM5Q71RC9 77 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 LDHDQ86WU2 507 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 OTUD6BQ8N6M0 293 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 NFATC2IPQ8NCF5 419 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 CNKSR1Q969H4 720 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 HHIPL1Q96JK4 782 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 BCL2L13Q9BXK5 485 aa3.36□□□□□ -1.87
PRPF39-206ENST00000554429 VGLL3A8MV65 326 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 H0YIN7 160 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 CAMTA2O94983 1202 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 DNAJC10Q8IXB1 793 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 PANK3Q9H999 370 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 MAP3K20Q9NYL2 800 aaKnown RBP3.35□□□□□ -1.87
PRPF39-206ENST00000554429 TPX2Q9ULW0 747 aaKnown RBP3.35□□□□□ -1.87
PRPF39-206ENST00000554429 COG6Q9Y2V7 657 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 RBBP6Q7Z6E9 1792 aaKnown RBP3.35□□□□□ -1.87
PRPF39-206ENST00000554429 IQCA1LA6NCM1 817 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 FZD9O00144 591 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 MSTNO14793 375 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 STARD3NLO95772 234 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 CT47B1P0C2W7 299 aaPredicted RBP3.35□□□□□ -1.87
PRPF39-206ENST00000554429 HSPA1AP0DMV8 641 aaKnown RBP3.35□□□□□ -1.87
PRPF39-206ENST00000554429 HSPA1BP0DMV9 641 aaKnown RBP3.35□□□□□ -1.87
PRPF39-206ENST00000554429 SRGNP10124 158 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 LIG1P18858 919 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 CHRNA5P30532 468 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 EIF4G2P78344 907 aaKnown RBP eCLIP3.35□□□□□ -1.87
PRPF39-206ENST00000554429 C4orf46Q504U0 113 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 C2CD5Q86YS7 1000 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 GPIHBP1Q8IV16 184 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 MASTLQ96GX5 879 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 KLF15Q9UIH9 416 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 COMMD10Q9Y6G5 202 aa3.35□□□□□ -1.87
PRPF39-206ENST00000554429 RNF123Q5XPI4 1314 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 CDHR2Q9BYE9 1310 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 POM121CA8CG34 1229 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 HMGB1P1B2RPK0 211 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-206ENST00000554429 HOXA2O43364 376 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 NRDCO43847 1150 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 CALRP27797 417 aaKnown RBP3.34□□□□□ -1.87
PRPF39-206ENST00000554429 RGS3P49796 1198 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 FKBP4Q02790 459 aaKnown RBP eCLIP3.34□□□□□ -1.87
PRPF39-206ENST00000554429 CRY2Q49AN0 593 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 SULT6B1Q6IMI4 303 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 PRR5LQ6MZQ0 368 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 MORC1Q86VD1 984 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 AMOTL1Q8IY63 956 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 TNS4Q8IZW8 715 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 PROCA1Q8NCQ7 364 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-206ENST00000554429 GAS2L2Q8NHY3 880 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 DHX38Q92620 1227 aaKnown RBP3.34□□□□□ -1.87
PRPF39-206ENST00000554429 CALR3Q96L12 384 aaKnown RBP3.34□□□□□ -1.87
PRPF39-206ENST00000554429 RPS6KC1Q96S38 1066 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 PGAP2Q9UHJ9 254 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 PRDM4Q9UKN5 801 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 ZBTB1Q9Y2K1 713 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 ERBB4Q15303 1308 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 CFAP69A5D8W1 941 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 MS4A1P11836 297 aa3.34□□□□□ -1.87
PRPF39-206ENST00000554429 NPR1P16066 1061 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms