RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 EIF1AYO14602 144 aaKnown RBP7.67□□□□□ -1.18
SCFD1-210ENST00000553693 GAS2O43903 313 aaKnown RBP7.67□□□□□ -1.18
SCFD1-210ENST00000553693 GSTM4Q03013 218 aa7.67□□□□□ -1.18
SCFD1-210ENST00000553693 NUTM2GQ5VZR2 741 aa7.67□□□□□ -1.18
SCFD1-210ENST00000553693 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
SCFD1-210ENST00000553693 NIF3L1Q9GZT8 377 aa7.67□□□□□ -1.18
SCFD1-210ENST00000553693 NPHS2Q9NP85 383 aa7.67□□□□□ -1.18
SCFD1-210ENST00000553693 DCTN4Q9UJW0 460 aa7.67□□□□□ -1.18
SCFD1-210ENST00000553693 HIF3AQ9Y2N7 669 aa7.67□□□□□ -1.18
SCFD1-210ENST00000553693 LOC100289279A0A1B0GTE1 492 aa7.66□□□□□ -1.18
SCFD1-210ENST00000553693 KIAA1324LA8MWY0 1029 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-210ENST00000553693 IGHA2P01877 340 aa7.66□□□□□ -1.18
SCFD1-210ENST00000553693 PREPP48147 710 aa7.66□□□□□ -1.18
SCFD1-210ENST00000553693 HP1BP3Q5SSJ5 553 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-210ENST00000553693 CCDC74AQ96AQ1 378 aa7.66□□□□□ -1.18
SCFD1-210ENST00000553693 CSRNP1Q96S65 589 aa7.66□□□□□ -1.18
SCFD1-210ENST00000553693 CYP4F12Q9HCS2 524 aa7.66□□□□□ -1.18
SCFD1-210ENST00000553693 GADD45BO75293 160 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-210ENST00000553693 GRIA4P48058 902 aa7.65□□□□□ -1.18
SCFD1-210ENST00000553693 SPRED3Q2MJR0 410 aa7.65□□□□□ -1.18
SCFD1-210ENST00000553693 PRPF40BQ6NWY9 871 aaKnown RBP7.65□□□□□ -1.18
SCFD1-210ENST00000553693 FAM20CQ8IXL6 584 aa7.65□□□□□ -1.18
SCFD1-210ENST00000553693 TMPRSS13Q9BYE2 586 aa7.65□□□□□ -1.18
SCFD1-210ENST00000553693 SUGCTQ9HAC7 445 aa7.65□□□□□ -1.18
SCFD1-210ENST00000553693 ZFYVE1Q9HBF4 777 aa7.65□□□□□ -1.18
SCFD1-210ENST00000553693 TRAK1Q9UPV9 953 aa7.65□□□□□ -1.18
SCFD1-210ENST00000553693 ADAMTS4O75173 837 aa7.64□□□□□ -1.19
SCFD1-210ENST00000553693 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
SCFD1-210ENST00000553693 CYP11A1P05108 521 aa7.64□□□□□ -1.19
SCFD1-210ENST00000553693 PTPN12Q05209 780 aaKnown RBP7.64□□□□□ -1.19
SCFD1-210ENST00000553693 KCNA1Q09470 495 aa7.64□□□□□ -1.19
SCFD1-210ENST00000553693 SMG8Q8ND04 991 aaKnown RBP7.64□□□□□ -1.19
SCFD1-210ENST00000553693 ZNF576Q9H609 170 aa7.64□□□□□ -1.19
SCFD1-210ENST00000553693 C7orf69Q9H7B7 122 aa7.64□□□□□ -1.19
SCFD1-210ENST00000553693 B3GALT4O96024 378 aa7.63□□□□□ -1.19
SCFD1-210ENST00000553693 BMP3P12645 472 aa7.63□□□□□ -1.19
SCFD1-210ENST00000553693 ITPKAP23677 461 aa7.63□□□□□ -1.19
SCFD1-210ENST00000553693 MAPK1P28482 360 aa7.63□□□□□ -1.19
SCFD1-210ENST00000553693 TMC7Q7Z402 723 aa7.63□□□□□ -1.19
SCFD1-210ENST00000553693 CLEC10AQ8IUN9 316 aa7.63□□□□□ -1.19
SCFD1-210ENST00000553693 KCNF1Q9H3M0 494 aa7.63□□□□□ -1.19
SCFD1-210ENST00000553693 PATL2C9JE40 543 aaKnown RBP7.62□□□□□ -1.19
SCFD1-210ENST00000553693 TIAF1O95411 115 aa7.62□□□□□ -1.19
SCFD1-210ENST00000553693 NFIAQ12857 509 aa7.62□□□□□ -1.19
SCFD1-210ENST00000553693 ZNF423Q2M1K9 1284 aa7.62□□□□□ -1.19
SCFD1-210ENST00000553693 RPS26P11Q5JNZ5 115 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-210ENST00000553693 EXOSC6Q5RKV6 272 aaKnown RBP7.62□□□□□ -1.19
SCFD1-210ENST00000553693 TRIM42Q8IWZ5 723 aa7.62□□□□□ -1.19
SCFD1-210ENST00000553693 C12orf50Q8NA57 414 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-210ENST00000553693 FAM83CQ9BQN1 747 aa7.62□□□□□ -1.19
SCFD1-210ENST00000553693 DBNDD2Q9BQY9 259 aa7.62□□□□□ -1.19
SCFD1-210ENST00000553693 NRSN2Q9GZP1 204 aa7.62□□□□□ -1.19
SCFD1-210ENST00000553693 ABCB6Q9NP58 842 aa7.62□□□□□ -1.19
SCFD1-210ENST00000553693 POU4F3Q15319 338 aa7.61□□□□□ -1.19
SCFD1-210ENST00000553693 RNF43Q68DV7 783 aa7.61□□□□□ -1.19
SCFD1-210ENST00000553693 BEND4Q6ZU67 534 aa7.61□□□□□ -1.19
SCFD1-210ENST00000553693 NLRP2Q9NX02 1062 aa7.61□□□□□ -1.19
SCFD1-210ENST00000553693 TMEM238LA0A1B0GVL6 79 aa7.6□□□□□ -1.19
SCFD1-210ENST00000553693 HMX2A2RU54 273 aa7.6□□□□□ -1.19
SCFD1-210ENST00000553693 CORO1BQ9BR76 489 aa7.6□□□□□ -1.19
SCFD1-210ENST00000553693 IVNS1ABPQ9Y6Y0 642 aa7.6□□□□□ -1.19
SCFD1-210ENST00000553693 TREHO43280 583 aa7.59□□□□□ -1.19
SCFD1-210ENST00000553693 DLGAP3O95886 979 aa7.59□□□□□ -1.19
SCFD1-210ENST00000553693 MAOBP27338 520 aa7.59□□□□□ -1.19
SCFD1-210ENST00000553693 MAP4P27816 1152 aaKnown RBP7.59□□□□□ -1.19
SCFD1-210ENST00000553693 HNRNPUQ00839 825 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCFD1-210ENST00000553693 AP3B2Q13367 1082 aa7.59□□□□□ -1.19
SCFD1-210ENST00000553693 GRM2Q14416 872 aa7.59□□□□□ -1.19
SCFD1-210ENST00000553693 ZSCAN29Q8IWY8 852 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-210ENST00000553693 YIPF2Q9BWQ6 316 aa7.59□□□□□ -1.19
SCFD1-210ENST00000553693 PPP4R2Q9NY27 417 aa7.59□□□□□ -1.19
SCFD1-210ENST00000553693 PNMA6FA0A0J9YX94 578 aa7.58□□□□□ -1.2
SCFD1-210ENST00000553693 RXRBP28702 533 aa7.58□□□□□ -1.2
SCFD1-210ENST00000553693 USP11P51784 963 aa7.58□□□□□ -1.2
SCFD1-210ENST00000553693 SGO2Q562F6 1265 aa7.58□□□□□ -1.2
SCFD1-210ENST00000553693 EPS8L3Q8TE67 593 aaKnown RBP7.58□□□□□ -1.2
SCFD1-210ENST00000553693 TGFB1P01137 390 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 ADH5P11766 374 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 XRCC5P13010 732 aaKnown RBP7.57□□□□□ -1.2
SCFD1-210ENST00000553693 GRIK1P39086 918 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 PLCB3Q01970 1234 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 SOX4Q06945 474 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-210ENST00000553693 DSC3Q14574 896 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 ENOX2Q16206 610 aaKnown RBP7.57□□□□□ -1.2
SCFD1-210ENST00000553693 DTHD1Q6ZMT9 781 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 ZDHHC13Q8IUH4 622 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 GLIS3Q8NEA6 775 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 GIMAP7Q8NHV1 300 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 TRIM56Q9BRZ2 755 aaKnown RBP7.57□□□□□ -1.2
SCFD1-210ENST00000553693 TRAIPQ9BWF2 469 aa7.57□□□□□ -1.2
SCFD1-210ENST00000553693 PAOXQ6QHF9 649 aa7.56□□□□□ -1.2
SCFD1-210ENST00000553693 C2CD4AQ8NCU7 369 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-210ENST00000553693 RAD18Q9NS91 495 aa7.56□□□□□ -1.2
SCFD1-210ENST00000553693 FAM95CA0A1B0GW59 222 aa7.55□□□□□ -1.2
SCFD1-210ENST00000553693 DRD2P14416 443 aa7.55□□□□□ -1.2
SCFD1-210ENST00000553693 SPINK2P20155 84 aa7.55□□□□□ -1.2
SCFD1-210ENST00000553693 FCGRTP55899 365 aa7.55□□□□□ -1.2
SCFD1-210ENST00000553693 PDE3AQ14432 1141 aa7.55□□□□□ -1.2
SCFD1-210ENST00000553693 OGFOD2Q6N063 350 aa7.55□□□□□ -1.2
SCFD1-210ENST00000553693 INTS5Q6P9B9 1019 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms