RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 LETM1O95202 739 aaPredicted RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 TRDNQ13061 729 aa16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 TBC1D10CQ8IV04 446 aa16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 ANP32BQ92688 251 aaKnown RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 SCAND2PQ9GZW5 306 aaPredicted RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 RTN4Q9NQC3 1192 aaKnown RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 ONECUT3O60422 494 aaPredicted RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 MBD4O95243 580 aa16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 CCDC173Q0VFZ6 552 aa16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 NBPF5PQ86XG9 351 aaPredicted RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 CELF1Q92879 486 aaKnown RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 ARHGEF1Q92888 912 aaKnown RBP16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 PPP1R9BQ96SB3 815 aa16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 TSPY26PQ9H489 355 aa16.49■□□□□ 0.23
RAB3IP-216ENST00000552199 KLF18A0A0U1RQI7 1052 aa16.48■□□□□ 0.23
RAB3IP-216ENST00000552199 TPRNQ4KMQ1 711 aa16.48■□□□□ 0.23
RAB3IP-216ENST00000552199 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
RAB3IP-216ENST00000552199 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
RAB3IP-216ENST00000552199 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
RAB3IP-216ENST00000552199 AFF2P51816 1311 aa16.48■□□□□ 0.23
RAB3IP-216ENST00000552199 TPTE2Q6XPS3 522 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 AMIGO3Q86WK7 504 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 EPB41L4AQ9HCS5 686 aaPredicted RBP16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 TFIP11Q9UBB9 837 aaKnown RBP16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 PNPLA7Q6ZV29 1317 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 WTIPA6NIX2 430 aaPredicted RBP16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 GNAT2P19087 354 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 GYG1P46976 350 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 LEO1Q8WVC0 666 aaPredicted RBP16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 SPATA32Q96LK8 384 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 HPS5Q9UPZ3 1129 aa16.47■□□□□ 0.23
RAB3IP-216ENST00000552199 GOLGA8BA8MQT2 603 aa16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 GSG1L2A8MUP6 293 aa16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 DHX16O60231 1041 aaKnown RBP16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 NAPBQ9H115 298 aa16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 IQSEC3Q9UPP2 1182 aaPredicted RBP16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 C4BP0C0L5 1744 aa16.46■□□□□ 0.23
RAB3IP-216ENST00000552199 MYH15Q9Y2K3 1946 aa16.46■□□□□ 0.22
RAB3IP-216ENST00000552199 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 LCORLQ8N3X6 602 aa16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 NKX2-3Q8TAU0 364 aa16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 CHD4Q14839 1912 aa16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 CARMIL3Q8ND23 1372 aa16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 SEPT12Q8IYM1 358 aa16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 FAM84BQ96KN1 310 aaPredicted RBP16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 ANGEL1Q9UNK9 670 aaKnown RBP16.45■□□□□ 0.22
RAB3IP-216ENST00000552199 C4AP0C0L4 1744 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 B4E1Z4 1266 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 PRKAB2O43741 272 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 CYP7A1P22680 504 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 HSPA1LP34931 641 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 FOSBP53539 338 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 TMEM87BQ96K49 555 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 NACAP1Q9BZK3 213 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 CFAP45Q9UL16 551 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 NEDD4P46934 1319 aa16.44■□□□□ 0.22
RAB3IP-216ENST00000552199 RFC4P35249 363 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 FBXO33Q7Z6M2 555 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 ABCF2Q9UG63 623 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 COL1A1P02452 1464 aaPredicted RBP16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 TIAM2Q8IVF5 1701 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 PPFIA3O75145 1194 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 TM4SF1P30408 202 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 CTDSPL2Q05D32 466 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 FAM196AQ6ZSG2 479 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 IGDCC4Q8TDY8 1250 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 TRIM44Q96DX7 344 aaPredicted RBP16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 RAI14Q9P0K7 980 aa16.43■□□□□ 0.22
RAB3IP-216ENST00000552199 GOLGA6L4A6NEF3 574 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 SEMA3EO15041 775 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 TDO2P48775 406 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 AKNAD1Q5T1N1 836 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 MIGA1Q8NAN2 632 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 CNNM2Q9H8M5 875 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 INCENPQ9NQS7 918 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 TACC3Q9Y6A5 838 aa16.42■□□□□ 0.22
RAB3IP-216ENST00000552199 CPLX1O14810 134 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 LIG1P18858 919 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 ADGRA1Q86SQ6 560 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 RAB11FIP4Q86YS3 637 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms