RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.69□□□□□ -1.02
GPN3-209ENST00000551079 SMG8Q8ND04 991 aaKnown RBP8.69□□□□□ -1.02
GPN3-209ENST00000551079 NRSN2Q9GZP1 204 aa8.69□□□□□ -1.02
GPN3-209ENST00000551079 SUGCTQ9HAC7 445 aa8.69□□□□□ -1.02
GPN3-209ENST00000551079 C12orf50Q8NA57 414 aaPredicted RBP8.68□□□□□ -1.02
GPN3-209ENST00000551079 GLIS3Q8NEA6 775 aa8.68□□□□□ -1.02
GPN3-209ENST00000551079 HIF3AQ9Y2N7 669 aa8.68□□□□□ -1.02
GPN3-209ENST00000551079 GAS2O43903 313 aaKnown RBP8.67□□□□□ -1.02
GPN3-209ENST00000551079 DLGAP3O95886 979 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 BMP3P12645 472 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 MAPK8P45983 427 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 FMR1Q06787 632 aaKnown RBP eCLIP8.67□□□□□ -1.02
GPN3-209ENST00000551079 POU4F3Q15319 338 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 DTHD1Q6ZMT9 781 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 FAM20CQ8IXL6 584 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 FBF1Q8TES7 1133 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 CORO1BQ9BR76 489 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 BCO2Q9BYV7 579 aa8.67□□□□□ -1.02
GPN3-209ENST00000551079 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.66□□□□□ -1.02
GPN3-209ENST00000551079 XRCC5P13010 732 aaKnown RBP8.66□□□□□ -1.02
GPN3-209ENST00000551079 MAOBP27338 520 aa8.66□□□□□ -1.02
GPN3-209ENST00000551079 FCGRTP55899 365 aa8.66□□□□□ -1.02
GPN3-209ENST00000551079 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
GPN3-209ENST00000551079 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
GPN3-209ENST00000551079 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
GPN3-209ENST00000551079 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
GPN3-209ENST00000551079 Q8N3U1 123 aa8.66□□□□□ -1.02
GPN3-209ENST00000551079 KCNF1Q9H3M0 494 aa8.66□□□□□ -1.02
GPN3-209ENST00000551079 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
GPN3-209ENST00000551079 TIAF1O95411 115 aa8.65□□□□□ -1.02
GPN3-209ENST00000551079 AP3B2Q13367 1082 aa8.65□□□□□ -1.02
GPN3-209ENST00000551079 TRIM56Q9BRZ2 755 aaKnown RBP8.65□□□□□ -1.02
GPN3-209ENST00000551079 IGLV1-40P01703 118 aa8.64□□□□□ -1.03
GPN3-209ENST00000551079 ATP2B2Q01814 1243 aa8.64□□□□□ -1.03
GPN3-209ENST00000551079 ALG1LQ6GMV1 187 aa8.64□□□□□ -1.03
GPN3-209ENST00000551079 BEND4Q6ZU67 534 aa8.64□□□□□ -1.03
GPN3-209ENST00000551079 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
GPN3-209ENST00000551079 FAM83CQ9BQN1 747 aa8.64□□□□□ -1.03
GPN3-209ENST00000551079 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
GPN3-209ENST00000551079 RNF112Q9ULX5 631 aa8.64□□□□□ -1.03
GPN3-209ENST00000551079 NXPE4Q6UWF7 544 aa8.63□□□□□ -1.03
GPN3-209ENST00000551079 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
GPN3-209ENST00000551079 SRCIN1Q9C0H9 1055 aa8.63□□□□□ -1.03
GPN3-209ENST00000551079 HMX2A2RU54 273 aa8.62□□□□□ -1.03
GPN3-209ENST00000551079 PPP2R3AQ06190 1150 aa8.62□□□□□ -1.03
GPN3-209ENST00000551079 SOX4Q06945 474 aaPredicted RBP8.62□□□□□ -1.03
GPN3-209ENST00000551079 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
GPN3-209ENST00000551079 NFIAQ12857 509 aa8.62□□□□□ -1.03
GPN3-209ENST00000551079 RNF43Q68DV7 783 aa8.62□□□□□ -1.03
GPN3-209ENST00000551079 SND1Q7KZF4 910 aaKnown RBP eCLIP8.62□□□□□ -1.03
GPN3-209ENST00000551079 RAD18Q9NS91 495 aa8.62□□□□□ -1.03
GPN3-209ENST00000551079 GIPC1O14908 333 aa8.61□□□□□ -1.03
GPN3-209ENST00000551079 CTSBP07858 339 aa8.61□□□□□ -1.03
GPN3-209ENST00000551079 ADH5P11766 374 aa8.61□□□□□ -1.03
GPN3-209ENST00000551079 DRD2P14416 443 aa8.61□□□□□ -1.03
GPN3-209ENST00000551079 MAP4P27816 1152 aaKnown RBP8.61□□□□□ -1.03
GPN3-209ENST00000551079 RXRBP28702 533 aa8.61□□□□□ -1.03
GPN3-209ENST00000551079 USP11P51784 963 aa8.61□□□□□ -1.03
GPN3-209ENST00000551079 ZNF157P51786 506 aaPredicted RBP8.61□□□□□ -1.03
GPN3-209ENST00000551079 HNRNPUQ00839 825 aaKnown RBP eCLIP8.61□□□□□ -1.03
GPN3-209ENST00000551079 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
GPN3-209ENST00000551079 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
GPN3-209ENST00000551079 GPN3Q9UHW5 284 aaPredicted RBP8.61□□□□□ -1.03
GPN3-209ENST00000551079 ECEL1O95672 775 aa8.6□□□□□ -1.03
GPN3-209ENST00000551079 PDE3AQ14432 1141 aa8.6□□□□□ -1.03
GPN3-209ENST00000551079 SGO2Q562F6 1265 aa8.6□□□□□ -1.03
GPN3-209ENST00000551079 ARTNQ5T4W7 220 aa8.6□□□□□ -1.03
GPN3-209ENST00000551079 C2CD4AQ8NCU7 369 aaPredicted RBP8.6□□□□□ -1.03
GPN3-209ENST00000551079 YIPF2Q9BWQ6 316 aa8.6□□□□□ -1.03
GPN3-209ENST00000551079 AKAP2Q9Y2D5 859 aa8.6□□□□□ -1.03
GPN3-209ENST00000551079 KRTAP9-6A0A140TA67 174 aa8.59□□□□□ -1.03
GPN3-209ENST00000551079 GSTT1P30711 240 aa8.59□□□□□ -1.03
GPN3-209ENST00000551079 LRP8Q14114 963 aa8.59□□□□□ -1.03
GPN3-209ENST00000551079 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
GPN3-209ENST00000551079 ZFP64Q9NPA5 681 aa8.59□□□□□ -1.03
GPN3-209ENST00000551079 SPG7Q9UQ90 795 aa8.59□□□□□ -1.03
GPN3-209ENST00000551079 SYNGAP1Q96PV0 1343 aa8.58□□□□□ -1.04
GPN3-209ENST00000551079 P4HBP07237 508 aaKnown RBP8.58□□□□□ -1.04
GPN3-209ENST00000551079 AKAP4Q5JQC9 854 aa8.58□□□□□ -1.04
GPN3-209ENST00000551079 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
GPN3-209ENST00000551079 WWC3Q9ULE0 1092 aa8.58□□□□□ -1.04
GPN3-209ENST00000551079 FAM95CA0A1B0GW59 222 aa8.57□□□□□ -1.04
GPN3-209ENST00000551079 AOC2O75106 756 aa8.57□□□□□ -1.04
GPN3-209ENST00000551079 LDHBP07195 334 aaKnown RBP8.57□□□□□ -1.04
GPN3-209ENST00000551079 FGD1P98174 961 aa8.57□□□□□ -1.04
GPN3-209ENST00000551079 COL19A1Q14993 1142 aa8.57□□□□□ -1.04
GPN3-209ENST00000551079 FBLIM1Q8WUP2 373 aa8.57□□□□□ -1.04
GPN3-209ENST00000551079 OSBPL7Q9BZF2 842 aa8.57□□□□□ -1.04
GPN3-209ENST00000551079 AP4E1Q9UPM8 1137 aa8.57□□□□□ -1.04
GPN3-209ENST00000551079 ACTL7BQ9Y614 415 aa8.57□□□□□ -1.04
GPN3-209ENST00000551079 GSTP1P09211 210 aaKnown RBP8.56□□□□□ -1.04
GPN3-209ENST00000551079 CDPF1Q6NVV7 123 aa8.56□□□□□ -1.04
GPN3-209ENST00000551079 PAOXQ6QHF9 649 aa8.56□□□□□ -1.04
GPN3-209ENST00000551079 DYMQ7RTS9 669 aa8.56□□□□□ -1.04
GPN3-209ENST00000551079 ZDHHC13Q8IUH4 622 aa8.56□□□□□ -1.04
GPN3-209ENST00000551079 C3orf58Q8NDZ4 430 aa8.56□□□□□ -1.04
GPN3-209ENST00000551079 GIMAP7Q8NHV1 300 aa8.56□□□□□ -1.04
GPN3-209ENST00000551079 EZH1Q92800 747 aaPredicted RBP8.56□□□□□ -1.04
GPN3-209ENST00000551079 FRMD6Q96NE9 622 aa8.56□□□□□ -1.04
GPN3-209ENST00000551079 WDR18Q9BV38 432 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms