RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 TTC12Q9H892 705 aaPredicted RBP18.15■□□□□ 0.5
BRF1-212ENST00000547562 ORC3Q9UBD5 711 aaPredicted RBP18.15■□□□□ 0.5
BRF1-212ENST00000547562 LOC102724428A0A0B4J2F2 783 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 FAM177BA6PVY3 158 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 CPLX1O14810 134 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 CAMTA2O94983 1202 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 SIK1P57059 783 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 FBXO18Q8NFZ0 1043 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 STRBPQ96SI9 672 aaKnown RBP18.15■□□□□ 0.5
BRF1-212ENST00000547562 GOLPH3LQ9H4A5 285 aa18.15■□□□□ 0.5
BRF1-212ENST00000547562 ANGEL1Q9UNK9 670 aaKnown RBP18.15■□□□□ 0.5
BRF1-212ENST00000547562 ADAMTS2O95450 1211 aa18.14■□□□□ 0.5
BRF1-212ENST00000547562 RASGRF1Q13972 1273 aa18.14■□□□□ 0.5
BRF1-212ENST00000547562 AIDAQ96BJ3 306 aa18.14■□□□□ 0.5
BRF1-212ENST00000547562 SEC31BQ9NQW1 1179 aa18.14■□□□□ 0.5
BRF1-212ENST00000547562 DENND2AQ9ULE3 1009 aa18.14■□□□□ 0.5
BRF1-212ENST00000547562 R3HCC1Q9Y3T6 440 aaKnown RBP18.14■□□□□ 0.5
BRF1-212ENST00000547562 CTAGE5O15320 804 aa18.14■□□□□ 0.49
BRF1-212ENST00000547562 SNW1Q13573 536 aaKnown RBP18.14■□□□□ 0.49
BRF1-212ENST00000547562 CCDC73Q6ZRK6 1079 aa18.14■□□□□ 0.49
BRF1-212ENST00000547562 CYB5R4Q7L1T6 521 aa18.14■□□□□ 0.49
BRF1-212ENST00000547562 RAB11FIP4Q86YS3 637 aa18.14■□□□□ 0.49
BRF1-212ENST00000547562 MARCH10Q8NA82 808 aaPredicted RBP18.14■□□□□ 0.49
BRF1-212ENST00000547562 PIBF1Q8WXW3 757 aa18.14■□□□□ 0.49
BRF1-212ENST00000547562 RTEL1Q9NZ71 1219 aa18.14■□□□□ 0.49
BRF1-212ENST00000547562 CAVIN2O95810 425 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 ME1P48163 572 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 ITPK1Q13572 414 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 ALX1Q15699 326 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 ZMYM6O95789 1325 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 SNAP23O00161 211 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 SH2B2O14492 632 aaPredicted RBP18.13■□□□□ 0.49
BRF1-212ENST00000547562 ZNF165P49910 485 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 FAM160A1Q05DH4 1040 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 MAP3K12Q12852 859 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 CCDC152Q4G0S7 254 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 ENGASEQ8NFI3 743 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 TDRD7Q8NHU6 1098 aaKnown RBP18.13■□□□□ 0.49
BRF1-212ENST00000547562 NKX2-3Q8TAU0 364 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 RTL9Q8NET4 1388 aa18.13■□□□□ 0.49
BRF1-212ENST00000547562 TPM3P06753 285 aa18.12■□□□□ 0.49
BRF1-212ENST00000547562 DNAJC25Q9H1X3 360 aa18.12■□□□□ 0.49
BRF1-212ENST00000547562 NTSR2O95665 410 aa18.12■□□□□ 0.49
BRF1-212ENST00000547562 BRAPQ7Z569 592 aa18.12■□□□□ 0.49
BRF1-212ENST00000547562 MAGEB6Q8N7X4 407 aa18.12■□□□□ 0.49
BRF1-212ENST00000547562 GOLGA6L6A8MZA4 724 aa18.11■□□□□ 0.49
BRF1-212ENST00000547562 B4E1Z4 1266 aa18.11■□□□□ 0.49
BRF1-212ENST00000547562 KINO60870 393 aaKnown RBP18.11■□□□□ 0.49
BRF1-212ENST00000547562 FSIP1Q8NA03 581 aa18.11■□□□□ 0.49
BRF1-212ENST00000547562 RGS22Q8NE09 1264 aa18.11■□□□□ 0.49
BRF1-212ENST00000547562 PCDHA7Q9UN72 937 aa18.11■□□□□ 0.49
BRF1-212ENST00000547562 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
BRF1-212ENST00000547562 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
BRF1-212ENST00000547562 IGHMBP2P38935 993 aaKnown RBP18.11■□□□□ 0.49
BRF1-212ENST00000547562 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
BRF1-212ENST00000547562 TMEM87BQ96K49 555 aa18.11■□□□□ 0.49
BRF1-212ENST00000547562 NEDD4P46934 1319 aa18.11■□□□□ 0.49
BRF1-212ENST00000547562 MBD4O95243 580 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 METAP2P50579 478 aaKnown RBP eCLIP18.1■□□□□ 0.49
BRF1-212ENST00000547562 ADALQ6DHV7 355 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 LINC00301Q8NCQ3 95 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 EPB41L4AQ9HCS5 686 aaPredicted RBP18.1■□□□□ 0.49
BRF1-212ENST00000547562 POLR3EQ9NVU0 708 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 ECM29Q5VYK3 1845 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 BCORQ6W2J9 1755 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 COL5A3P25940 1745 aaPredicted RBP18.1■□□□□ 0.49
BRF1-212ENST00000547562 SPATA31A5Q5VU36 1347 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 SPATA31A7Q8IWB4 1347 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 POLR3DP05423 398 aaPredicted RBP18.1■□□□□ 0.49
BRF1-212ENST00000547562 MYSM1Q5VVJ2 828 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 APOA5Q6Q788 366 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 IFNL3Q8IZI9 196 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 MRPS27Q92552 414 aaKnown RBP18.1■□□□□ 0.49
BRF1-212ENST00000547562 GJB4Q9NTQ9 266 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 CLIC4Q9Y696 253 aa18.1■□□□□ 0.49
BRF1-212ENST00000547562 TIAM2Q8IVF5 1701 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 A0A1W2PQ27 194 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 A0A1W2PQ64 194 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 A0A1W2PQD8 194 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 YEATS4O95619 227 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 NOLC1Q14978 699 aaKnown RBP eCLIP18.09■□□□□ 0.49
BRF1-212ENST00000547562 KCNG4Q8TDN1 519 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 IGDCC4Q8TDY8 1250 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 NAPBQ9H115 298 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 CDKL5O76039 1030 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 BCAMP50895 628 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
BRF1-212ENST00000547562 STK38Q15208 465 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 STX1AQ16623 288 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 KCNF1Q9H3M0 494 aa18.09■□□□□ 0.49
BRF1-212ENST00000547562 KIF28PB7ZC32 967 aa18.08■□□□□ 0.49
BRF1-212ENST00000547562 SGMS1Q86VZ5 419 aa18.08■□□□□ 0.49
BRF1-212ENST00000547562 PLA2G4DQ86XP0 818 aa18.08■□□□□ 0.49
BRF1-212ENST00000547562 FMR1NBQ8N0W7 255 aaPredicted RBP18.08■□□□□ 0.49
BRF1-212ENST00000547562 ARMT1Q9H993 441 aa18.08■□□□□ 0.49
BRF1-212ENST00000547562 SENP2Q9HC62 589 aa18.08■□□□□ 0.49
BRF1-212ENST00000547562 LY9Q9HBG7 655 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms