RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 COL19A1Q14993 1142 aa10.35□□□□□ -0.75
CPNE8-204ENST00000546603 UTP4Q969X6 686 aaKnown RBP10.35□□□□□ -0.75
CPNE8-204ENST00000546603 SRCIN1Q9C0H9 1055 aa10.35□□□□□ -0.75
CPNE8-204ENST00000546603 SUGCTQ9HAC7 445 aa10.35□□□□□ -0.75
CPNE8-204ENST00000546603 CYP4F12Q9HCS2 524 aa10.35□□□□□ -0.75
CPNE8-204ENST00000546603 DHX15O43143 795 aaKnown RBP10.34□□□□□ -0.75
CPNE8-204ENST00000546603 MAOBP27338 520 aa10.34□□□□□ -0.75
CPNE8-204ENST00000546603 FGD1P98174 961 aa10.34□□□□□ -0.75
CPNE8-204ENST00000546603 POU4F3Q15319 338 aa10.34□□□□□ -0.75
CPNE8-204ENST00000546603 SMG8Q8ND04 991 aaKnown RBP10.34□□□□□ -0.75
CPNE8-204ENST00000546603 WWC3Q9ULE0 1092 aa10.34□□□□□ -0.75
CPNE8-204ENST00000546603 ANKRD33BA6NCL7 494 aa10.33□□□□□ -0.76
CPNE8-204ENST00000546603 LDHBP07195 334 aaKnown RBP10.33□□□□□ -0.76
CPNE8-204ENST00000546603 ITGB7P26010 798 aa10.33□□□□□ -0.76
CPNE8-204ENST00000546603 AP3B2Q13367 1082 aa10.33□□□□□ -0.76
CPNE8-204ENST00000546603 PRSS36Q5K4E3 855 aa10.33□□□□□ -0.76
CPNE8-204ENST00000546603 ARMC10Q8N2F6 343 aa10.33□□□□□ -0.76
CPNE8-204ENST00000546603 CORO1BQ9BR76 489 aa10.33□□□□□ -0.76
CPNE8-204ENST00000546603 SPG7Q9UQ90 795 aa10.33□□□□□ -0.76
CPNE8-204ENST00000546603 RAXQ9Y2V3 346 aa10.33□□□□□ -0.76
CPNE8-204ENST00000546603 DLGAP3O95886 979 aa10.32□□□□□ -0.76
CPNE8-204ENST00000546603 PPP2R3AQ06190 1150 aa10.32□□□□□ -0.76
CPNE8-204ENST00000546603 C12orf50Q8NA57 414 aaPredicted RBP10.32□□□□□ -0.76
CPNE8-204ENST00000546603 MYRFLQ96LU7 910 aa10.32□□□□□ -0.76
CPNE8-204ENST00000546603 SETDB2Q96T68 719 aa10.32□□□□□ -0.76
CPNE8-204ENST00000546603 TRIM56Q9BRZ2 755 aaKnown RBP10.32□□□□□ -0.76
CPNE8-204ENST00000546603 GZF1Q9H116 711 aaPredicted RBP10.32□□□□□ -0.76
CPNE8-204ENST00000546603 AKAP2Q9Y2D5 859 aa10.32□□□□□ -0.76
CPNE8-204ENST00000546603 GSTT1P30711 240 aa10.31□□□□□ -0.76
CPNE8-204ENST00000546603 PREPP48147 710 aa10.31□□□□□ -0.76
CPNE8-204ENST00000546603 FAAP100Q0VG06 881 aa10.31□□□□□ -0.76
CPNE8-204ENST00000546603 SLC51AQ86UW1 340 aa10.31□□□□□ -0.76
CPNE8-204ENST00000546603 FRMD6Q96NE9 622 aa10.31□□□□□ -0.76
CPNE8-204ENST00000546603 TMEM39AQ9NV64 488 aa10.31□□□□□ -0.76
CPNE8-204ENST00000546603 STOML1Q9UBI4 398 aa10.31□□□□□ -0.76
CPNE8-204ENST00000546603 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.3□□□□□ -0.76
CPNE8-204ENST00000546603 OSBPL7Q9BZF2 842 aa10.3□□□□□ -0.76
CPNE8-204ENST00000546603 GPN3Q9UHW5 284 aaPredicted RBP10.3□□□□□ -0.76
CPNE8-204ENST00000546603 HIF3AQ9Y2N7 669 aa10.3□□□□□ -0.76
CPNE8-204ENST00000546603 GAS2O43903 313 aaKnown RBP10.29□□□□□ -0.76
CPNE8-204ENST00000546603 TIAF1O95411 115 aa10.29□□□□□ -0.76
CPNE8-204ENST00000546603 ZNF157P51786 506 aaPredicted RBP10.29□□□□□ -0.76
CPNE8-204ENST00000546603 PRPF40AO75400 957 aaKnown RBP10.28□□□□□ -0.76
CPNE8-204ENST00000546603 BMP3P12645 472 aa10.28□□□□□ -0.76
CPNE8-204ENST00000546603 EAPPQ56P03 285 aaPredicted RBP10.28□□□□□ -0.76
CPNE8-204ENST00000546603 FAM20CQ8IXL6 584 aa10.28□□□□□ -0.76
CPNE8-204ENST00000546603 C3orf58Q8NDZ4 430 aa10.28□□□□□ -0.76
CPNE8-204ENST00000546603 CTSBP07858 339 aa10.27□□□□□ -0.77
CPNE8-204ENST00000546603 SOX4Q06945 474 aaPredicted RBP10.27□□□□□ -0.77
CPNE8-204ENST00000546603 CCDC27Q2M243 656 aa10.27□□□□□ -0.77
CPNE8-204ENST00000546603 DNAJC14Q6Y2X3 702 aaPredicted RBP10.27□□□□□ -0.77
CPNE8-204ENST00000546603 CLEC10AQ8IUN9 316 aa10.27□□□□□ -0.77
CPNE8-204ENST00000546603 C12orf49Q9H741 205 aa10.27□□□□□ -0.77
CPNE8-204ENST00000546603 RAD18Q9NS91 495 aa10.27□□□□□ -0.77
CPNE8-204ENST00000546603 PPM1HQ9ULR3 514 aa10.27□□□□□ -0.77
CPNE8-204ENST00000546603 GSC2O15499 205 aa10.26□□□□□ -0.77
CPNE8-204ENST00000546603 FSTP19883 344 aa10.26□□□□□ -0.77
CPNE8-204ENST00000546603 HNRNPUQ00839 825 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPNE8-204ENST00000546603 CEP44Q9C0F1 390 aa10.26□□□□□ -0.77
CPNE8-204ENST00000546603 FAM8A1Q9UBU6 413 aa10.26□□□□□ -0.77
CPNE8-204ENST00000546603 ECEL1O95672 775 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 DRD2P14416 443 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 ERCC3P19447 782 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 GNA15P30679 374 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 ZMYM1Q5SVZ6 1142 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 FAM83CQ9BQN1 747 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 KCNF1Q9H3M0 494 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 SYNGAP1Q96PV0 1343 aa10.25□□□□□ -0.77
CPNE8-204ENST00000546603 USP11P51784 963 aa10.24□□□□□ -0.77
CPNE8-204ENST00000546603 BEND4Q6ZU67 534 aa10.24□□□□□ -0.77
CPNE8-204ENST00000546603 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
CPNE8-204ENST00000546603 GSTP1P09211 210 aaKnown RBP10.23□□□□□ -0.77
CPNE8-204ENST00000546603 ADH5P11766 374 aa10.23□□□□□ -0.77
CPNE8-204ENST00000546603 AKAP4Q5JQC9 854 aa10.23□□□□□ -0.77
CPNE8-204ENST00000546603 TRIM42Q8IWZ5 723 aa10.23□□□□□ -0.77
CPNE8-204ENST00000546603 HOMEZQ8IX15 550 aa10.23□□□□□ -0.77
CPNE8-204ENST00000546603 C2CD4AQ8NCU7 369 aaPredicted RBP10.23□□□□□ -0.77
CPNE8-204ENST00000546603 ANKRD24Q8TF21 1146 aa10.23□□□□□ -0.77
CPNE8-204ENST00000546603 EMILIN2Q9BXX0 1053 aa10.23□□□□□ -0.77
CPNE8-204ENST00000546603 C7orf69Q9H7B7 122 aa10.23□□□□□ -0.77
CPNE8-204ENST00000546603 KRT82Q9NSB4 513 aa10.23□□□□□ -0.77
CPNE8-204ENST00000546603 HMX2A2RU54 273 aa10.22□□□□□ -0.77
CPNE8-204ENST00000546603 AOC2O75106 756 aa10.22□□□□□ -0.77
CPNE8-204ENST00000546603 IGLV1-40P01703 118 aa10.22□□□□□ -0.77
CPNE8-204ENST00000546603 NME2P22392 152 aa10.22□□□□□ -0.77
CPNE8-204ENST00000546603 EIF4BP23588 611 aaKnown RBP10.22□□□□□ -0.77
CPNE8-204ENST00000546603 MAP4P27816 1152 aaKnown RBP10.22□□□□□ -0.77
CPNE8-204ENST00000546603 RXRBP28702 533 aa10.22□□□□□ -0.77
CPNE8-204ENST00000546603 SULF2Q8IWU5 870 aa10.22□□□□□ -0.77
CPNE8-204ENST00000546603 NECAB3Q96P71 396 aaPredicted RBP10.22□□□□□ -0.77
CPNE8-204ENST00000546603 DUSP9Q99956 384 aaKnown RBP10.22□□□□□ -0.77
CPNE8-204ENST00000546603 YIPF2Q9BWQ6 316 aa10.22□□□□□ -0.77
CPNE8-204ENST00000546603 SAMM50Q9Y512 469 aa10.22□□□□□ -0.77
CPNE8-204ENST00000546603 USP17L7P0C7H9 530 aa10.21□□□□□ -0.77
CPNE8-204ENST00000546603 ARNTP27540 789 aa10.21□□□□□ -0.77
CPNE8-204ENST00000546603 SGO2Q562F6 1265 aa10.21□□□□□ -0.77
CPNE8-204ENST00000546603 RNF43Q68DV7 783 aa10.21□□□□□ -0.77
CPNE8-204ENST00000546603 TPTE2Q6XPS3 522 aa10.21□□□□□ -0.77
CPNE8-204ENST00000546603 CCDC86Q9H6F5 360 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms