RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 NDUFB9Q9Y6M9 179 aa8.08□□□□□ -1.12
PRKDC-211ENST00000546304 ADCY9O60503 1353 aa8.08□□□□□ -1.12
PRKDC-211ENST00000546304 MYH3P11055 1940 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 KIF16BQ96L93 1317 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 ANKRD31Q8N7Z5 1873 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 COL11A2P13942 1736 aaPredicted RBP8.07□□□□□ -1.12
PRKDC-211ENST00000546304 ZBTB7AO95365 584 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 GYS1P13807 737 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 RARSP54136 660 aaKnown RBP8.07□□□□□ -1.12
PRKDC-211ENST00000546304 AIMP1Q12904 312 aaKnown RBP8.07□□□□□ -1.12
PRKDC-211ENST00000546304 FLIIQ13045 1269 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 USPL1Q5W0Q7 1092 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 MSL1Q68DK7 614 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
PRKDC-211ENST00000546304 COPS6Q7L5N1 327 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 SLC16A10Q8TF71 515 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 ARXQ96QS3 562 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 MTFR1LQ9H019 292 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 PHAXQ9H814 394 aaKnown RBP8.07□□□□□ -1.12
PRKDC-211ENST00000546304 TNRC6CQ9HCJ0 1690 aaKnown RBP8.07□□□□□ -1.12
PRKDC-211ENST00000546304 CARMIL3Q8ND23 1372 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 DLEC1Q9Y238 1755 aa8.07□□□□□ -1.12
PRKDC-211ENST00000546304 DDX60Q8IY21 1712 aaKnown RBP8.06□□□□□ -1.12
PRKDC-211ENST00000546304 KIAA1551Q9HCM1 1747 aa8.06□□□□□ -1.12
PRKDC-211ENST00000546304 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
PRKDC-211ENST00000546304 DDX58O95786 925 aaKnown RBP8.06□□□□□ -1.12
PRKDC-211ENST00000546304 FBXO45P0C2W1 286 aa8.06□□□□□ -1.12
PRKDC-211ENST00000546304 DHX9Q08211 1270 aaKnown RBP8.06□□□□□ -1.12
PRKDC-211ENST00000546304 FKBP5Q13451 457 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-211ENST00000546304 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-211ENST00000546304 G2E3Q7L622 706 aa8.06□□□□□ -1.12
PRKDC-211ENST00000546304 IBTKQ9P2D0 1353 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-211ENST00000546304 PTPRCP08575 1304 aa8.05□□□□□ -1.12
PRKDC-211ENST00000546304 C10orf71Q711Q0 1435 aa8.05□□□□□ -1.12
PRKDC-211ENST00000546304 ESPNB1AK53 854 aa8.05□□□□□ -1.12
PRKDC-211ENST00000546304 MMP10P09238 476 aa8.05□□□□□ -1.12
PRKDC-211ENST00000546304 SCARF1Q14162 830 aa8.05□□□□□ -1.12
PRKDC-211ENST00000546304 INTS6LQ5JSJ4 861 aaKnown RBP8.05□□□□□ -1.12
PRKDC-211ENST00000546304 MEIOBQ8N635 442 aa8.05□□□□□ -1.12
PRKDC-211ENST00000546304 PLBD2Q8NHP8 589 aa8.05□□□□□ -1.12
PRKDC-211ENST00000546304 PGPEP1Q9NXJ5 209 aa8.05□□□□□ -1.12
PRKDC-211ENST00000546304 UTRNP46939 3433 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 UBN2Q6ZU65 1347 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 BRCA1P38398 1863 aaKnown RBP8.04□□□□□ -1.12
PRKDC-211ENST00000546304 CACNA1SQ13698 1873 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 DDR1Q08345 913 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 NR1H3Q13133 447 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 NFIXQ14938 502 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 HLFQ16534 295 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 HSP90AB3PQ58FF7 597 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 TBC1D9BQ66K14 1250 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 CLEC4GQ6UXB4 293 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 NLGN1Q8N2Q7 840 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 PI4KAP1Q8N8J0 262 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 ZFP42Q96MM3 310 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 RCAN3Q9UKA8 241 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 MAP3K2Q9Y2U5 619 aa8.04□□□□□ -1.12
PRKDC-211ENST00000546304 RIC1Q4ADV7 1423 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 ABCC12Q96J65 1359 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 POLRMTO00411 1230 aaKnown RBP8.03□□□□□ -1.12
PRKDC-211ENST00000546304 BCAR3O75815 825 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 GPTP24298 496 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 POLD1P28340 1107 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 KSR2Q6VAB6 950 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 BICDL1Q6ZP65 573 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 DNAAF4Q8WXU2 420 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 ZNF592Q92610 1267 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 SPON1Q9HCB6 807 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 NIP7Q9Y221 180 aaKnown RBP eCLIP8.03□□□□□ -1.12
PRKDC-211ENST00000546304 ABCC4O15439 1325 aa8.03□□□□□ -1.12
PRKDC-211ENST00000546304 F6X3S4 739 aa8.02□□□□□ -1.13
PRKDC-211ENST00000546304 MCCD1P59942 119 aaPredicted RBP8.02□□□□□ -1.13
PRKDC-211ENST00000546304 NEXNQ0ZGT2 675 aa8.02□□□□□ -1.13
PRKDC-211ENST00000546304 Q6ZVU0 165 aa8.02□□□□□ -1.13
PRKDC-211ENST00000546304 CNBD1Q8NA66 436 aa8.02□□□□□ -1.13
PRKDC-211ENST00000546304 FRAT1Q92837 279 aaPredicted RBP8.02□□□□□ -1.13
PRKDC-211ENST00000546304 SETDB2Q96T68 719 aa8.02□□□□□ -1.13
PRKDC-211ENST00000546304 MYD88Q99836 296 aa8.02□□□□□ -1.13
PRKDC-211ENST00000546304 METTL22Q9BUU2 404 aaPredicted RBP8.02□□□□□ -1.13
PRKDC-211ENST00000546304 PRM3Q9NNZ6 103 aa8.02□□□□□ -1.13
PRKDC-211ENST00000546304 RNF123Q5XPI4 1314 aa8.02□□□□□ -1.13
PRKDC-211ENST00000546304 SPEF2Q9C093 1822 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 ATP5J2-PTCD1G3V325 749 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 UPP2O95045 317 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 TRIM27P14373 513 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 TCIRG1Q13488 830 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 PARP10Q53GL7 1025 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 ATF7IPQ6VMQ6 1270 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 NLRP10Q86W26 655 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 NBPF5PQ86XG9 351 aaPredicted RBP8.01□□□□□ -1.13
PRKDC-211ENST00000546304 ZNF34Q8IZ26 560 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 LINC00528Q8N1L1 170 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 PURBQ96QR8 312 aaKnown RBP8.01□□□□□ -1.13
PRKDC-211ENST00000546304 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
PRKDC-211ENST00000546304 ISCA1Q9BUE6 129 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 API5Q9BZZ5 524 aaKnown RBP8.01□□□□□ -1.13
PRKDC-211ENST00000546304 NOB1Q9ULX3 412 aaKnown RBP8.01□□□□□ -1.13
PRKDC-211ENST00000546304 PCDHB9Q9Y5E1 797 aa8.01□□□□□ -1.13
PRKDC-211ENST00000546304 PARP3Q9Y6F1 533 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms