RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 UBE3CQ15386 1083 aa13.27□□□□□ -0.28
LGR5-203ENST00000540815 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.28
LGR5-203ENST00000540815 GTPBP4Q9BZE4 634 aaKnown RBP13.27□□□□□ -0.28
LGR5-203ENST00000540815 PIH1D3Q9NQM4 214 aaKnown RBP13.27□□□□□ -0.28
LGR5-203ENST00000540815 SNAP23O00161 211 aa13.27□□□□□ -0.29
LGR5-203ENST00000540815 CHST3Q7LGC8 479 aa13.27□□□□□ -0.29
LGR5-203ENST00000540815 MB21D2Q8IYB1 491 aaPredicted RBP13.27□□□□□ -0.29
LGR5-203ENST00000540815 PYCARDQ9ULZ3 195 aa13.27□□□□□ -0.29
LGR5-203ENST00000540815 WDR19Q8NEZ3 1342 aa13.27□□□□□ -0.29
LGR5-203ENST00000540815 RTL9Q8NET4 1388 aa13.27□□□□□ -0.29
LGR5-203ENST00000540815 HAND2P61296 217 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 CCT2P78371 535 aaKnown RBP13.26□□□□□ -0.29
LGR5-203ENST00000540815 SLC9C2Q5TAH2 1124 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 ZNF213O14771 459 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 SLC5A1P13866 664 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 MCM5P33992 734 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 GIMAP6Q6P9H5 292 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 NCOA7Q8NI08 942 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 ZBTB9Q96C00 473 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
LGR5-203ENST00000540815 TFIP11Q9UBB9 837 aaKnown RBP13.26□□□□□ -0.29
LGR5-203ENST00000540815 ERICH4A6NGS2 130 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 KIF20AO95235 890 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
LGR5-203ENST00000540815 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
LGR5-203ENST00000540815 PRC1O43663 620 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 LIG1P18858 919 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
LGR5-203ENST00000540815 CFAP45Q9UL16 551 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 TCRBV5S4A2TA0A5A2 114 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 GOLGA6L4A6NEF3 574 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 NTSR2O95665 410 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 NKX2-3Q8TAU0 364 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 ZNF532Q9HCE3 1301 aa13.25□□□□□ -0.29
LGR5-203ENST00000540815 AP5Z1O43299 807 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 IDH1O75874 414 aaKnown RBP13.24□□□□□ -0.29
LGR5-203ENST00000540815 PDE6AP16499 860 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 RALYLQ86SE5 291 aaKnown RBP13.24□□□□□ -0.29
LGR5-203ENST00000540815 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 NUP62CLQ9H1M0 184 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 ANTXR2P58335 489 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 PIP4K2BP78356 416 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 ATL3Q6DD88 541 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 SPATA5Q8NB90 893 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 DDX19AQ9NUU7 478 aaKnown RBP13.24□□□□□ -0.29
LGR5-203ENST00000540815 CARMIL3Q8ND23 1372 aa13.24□□□□□ -0.29
LGR5-203ENST00000540815 C4AP0C0L4 1744 aa13.23□□□□□ -0.29
LGR5-203ENST00000540815 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
LGR5-203ENST00000540815 ADD1P35611 737 aaKnown RBP13.23□□□□□ -0.29
LGR5-203ENST00000540815 PGBD1Q96JS3 809 aa13.23□□□□□ -0.29
LGR5-203ENST00000540815 WWC3Q9ULE0 1092 aa13.23□□□□□ -0.29
LGR5-203ENST00000540815 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
LGR5-203ENST00000540815 ZMYM6O95789 1325 aa13.23□□□□□ -0.29
LGR5-203ENST00000540815 CCDC192P0DO97 292 aa13.23□□□□□ -0.29
LGR5-203ENST00000540815 MAP3K11Q16584 847 aa13.23□□□□□ -0.29
LGR5-203ENST00000540815 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
LGR5-203ENST00000540815 DENND2AQ9ULE3 1009 aa13.23□□□□□ -0.29
LGR5-203ENST00000540815 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
LGR5-203ENST00000540815 DHX16O60231 1041 aaKnown RBP13.22□□□□□ -0.29
LGR5-203ENST00000540815 PPFIA3O75145 1194 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 IGHMBP2P38935 993 aaKnown RBP13.22□□□□□ -0.29
LGR5-203ENST00000540815 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
LGR5-203ENST00000540815 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 KLF18A0A0U1RQI7 1052 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 FDPSP14324 419 aaKnown RBP13.22□□□□□ -0.29
LGR5-203ENST00000540815 KCNQ4P56696 695 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 ALX1Q15699 326 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 RBM43Q6ZSC3 357 aaKnown RBP13.22□□□□□ -0.29
LGR5-203ENST00000540815 STRBPQ96SI9 672 aaKnown RBP13.22□□□□□ -0.29
LGR5-203ENST00000540815 CLSTN2Q9H4D0 955 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 ST7Q9NRC1 585 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 DACT1Q9NYF0 836 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 CHD4Q14839 1912 aa13.22□□□□□ -0.29
LGR5-203ENST00000540815 TRDNQ13061 729 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 RASGRF1Q13972 1273 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 FAM98CQ17RN3 349 aaKnown RBP13.21□□□□□ -0.29
LGR5-203ENST00000540815 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 ZNF396Q96N95 335 aaPredicted RBP13.21□□□□□ -0.29
LGR5-203ENST00000540815 KCNF1Q9H3M0 494 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 RCOR1Q9UKL0 485 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 A0A1B0GUL6 1792 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 CASZ1Q86V15 1759 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 GOLGA8BA8MQT2 603 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 CDK11BP21127 795 aaKnown RBP13.21□□□□□ -0.29
LGR5-203ENST00000540815 FOSBP53539 338 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
LGR5-203ENST00000540815 MAP3K12Q12852 859 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 CLEC4GQ6UXB4 293 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 SMIM5Q71RC9 77 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 AIDAQ96BJ3 306 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 TNMDQ9H2S6 317 aa13.21□□□□□ -0.29
LGR5-203ENST00000540815 BCL9LQ86UU0 1499 aa13.21□□□□□ -0.3
LGR5-203ENST00000540815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms