RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TOPAZ1Q8N9V7 1692 aa5.88□□□□□ -1.47
C2CD3-214ENST00000540057 AMPD1P23109 780 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 HIRAP54198 1017 aaPredicted RBP5.87□□□□□ -1.47
C2CD3-214ENST00000540057 PCBP4P57723 403 aaKnown RBP5.87□□□□□ -1.47
C2CD3-214ENST00000540057 LAMC2Q13753 1193 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 ZNF827Q17R98 1081 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 BICDL1Q6ZP65 573 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 CHSY3Q70JA7 882 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 SIX5Q8N196 739 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 OGFOD1Q8N543 542 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 CLUAP1Q96AJ1 413 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 C14orf93Q9H972 538 aaKnown RBP5.87□□□□□ -1.47
C2CD3-214ENST00000540057 MARK1Q9P0L2 795 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 POGKQ9P215 609 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 GPC6Q9Y625 555 aaPredicted RBP5.87□□□□□ -1.47
C2CD3-214ENST00000540057 SPATA31E1Q6ZUB1 1445 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 WNK3Q9BYP7 1800 aa5.87□□□□□ -1.47
C2CD3-214ENST00000540057 QSER1Q2KHR3 1735 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 EIF3AQ14152 1382 aaKnown RBP5.86□□□□□ -1.47
C2CD3-214ENST00000540057 SERTM1A2A2V5 107 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 M0R2N6 131 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 GNB5O14775 395 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 POLD1P28340 1107 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 ATP1A2P50993 1020 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 PSMA6P60900 246 aaKnown RBP5.86□□□□□ -1.47
C2CD3-214ENST00000540057 CFAP70Q5T0N1 1121 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 LRRC69Q6ZNQ3 347 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 ALYREFQ86V81 257 aaKnown RBP5.86□□□□□ -1.47
C2CD3-214ENST00000540057 LARGE2Q8N3Y3 721 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 MKRN1Q9UHC7 482 aaKnown RBP5.86□□□□□ -1.47
C2CD3-214ENST00000540057 ZNF232Q9UNY5 417 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 GJA3Q9Y6H8 435 aa5.86□□□□□ -1.47
C2CD3-214ENST00000540057 USP19O94966 1318 aa5.85□□□□□ -1.47
C2CD3-214ENST00000540057 PALM3A6NDB9 673 aaPredicted RBP5.85□□□□□ -1.47
C2CD3-214ENST00000540057 C21orf2O43822 256 aa5.85□□□□□ -1.47
C2CD3-214ENST00000540057 JMYQ8N9B5 988 aa5.85□□□□□ -1.47
C2CD3-214ENST00000540057 TSEN2Q8NCE0 465 aaKnown RBP5.85□□□□□ -1.47
C2CD3-214ENST00000540057 GLMNQ92990 594 aa5.85□□□□□ -1.47
C2CD3-214ENST00000540057 ITSN1Q15811 1721 aa5.85□□□□□ -1.47
C2CD3-214ENST00000540057 WDR90Q96KV7 1748 aa5.85□□□□□ -1.47
C2CD3-214ENST00000540057 NHSQ6T4R5 1651 aa5.85□□□□□ -1.47
C2CD3-214ENST00000540057 PNPLA7Q6ZV29 1317 aa5.84□□□□□ -1.47
C2CD3-214ENST00000540057 TUBGCP6Q96RT7 1819 aa5.84□□□□□ -1.47
C2CD3-214ENST00000540057 SFI1A8K8P3 1242 aa5.84□□□□□ -1.47
C2CD3-214ENST00000540057 ADAM23O75077 832 aa5.84□□□□□ -1.47
C2CD3-214ENST00000540057 GCP02774 474 aa5.84□□□□□ -1.47
C2CD3-214ENST00000540057 SFSWAPQ12872 951 aaKnown RBP5.84□□□□□ -1.47
C2CD3-214ENST00000540057 TRIM11Q96F44 468 aa5.84□□□□□ -1.47
C2CD3-214ENST00000540057 ZNF594Q96JF6 807 aaPredicted RBP5.84□□□□□ -1.47
C2CD3-214ENST00000540057 HSH2DQ96JZ2 352 aa5.84□□□□□ -1.47
C2CD3-214ENST00000540057 SLC30A3Q99726 388 aa5.84□□□□□ -1.47
C2CD3-214ENST00000540057 MAFBQ9Y5Q3 323 aaPredicted RBP5.84□□□□□ -1.47
C2CD3-214ENST00000540057 BTAF1O14981 1849 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 ARHGEF28Q8N1W1 1705 aaKnown RBP5.83□□□□□ -1.48
C2CD3-214ENST00000540057 HTRA3P83110 453 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 C1orf53Q5VUE5 145 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 TOM1L2Q6ZVM7 507 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 SYT9Q86SS6 491 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 ABTB2Q8N961 1025 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 RHPN1Q8TCX5 695 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 ACSBG1Q96GR2 724 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 PHACTR1Q9C0D0 580 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 TFIP11Q9UBB9 837 aaKnown RBP5.83□□□□□ -1.48
C2CD3-214ENST00000540057 PRR12Q9ULL5 1215 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 TRAK1Q9UPV9 953 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 COL18A1P39060 1754 aa5.83□□□□□ -1.48
C2CD3-214ENST00000540057 POLR3AO14802 1390 aaPredicted RBP5.82□□□□□ -1.48
C2CD3-214ENST00000540057 ACEP12821 1306 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 ADGRB1O14514 1584 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 ZBTB7CA1YPR0 619 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 EXOC5O00471 708 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 SIN3BO75182 1162 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 TOMM70O94826 608 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 CHRNA4P43681 627 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 TYRO3Q06418 890 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 TMEM132AQ24JP5 1023 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 NLRP13Q86W25 1043 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 ZNF280CQ8ND82 737 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 NUDT16Q96DE0 195 aaKnown RBP5.82□□□□□ -1.48
C2CD3-214ENST00000540057 HCN4Q9Y3Q4 1203 aa5.82□□□□□ -1.48
C2CD3-214ENST00000540057 BRD4O60885 1362 aaPredicted RBP5.81□□□□□ -1.48
C2CD3-214ENST00000540057 WDR17Q8IZU2 1322 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 RGPD5Q99666 1765 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 ELOA3CA0A087WX78 387 aaPredicted RBP5.81□□□□□ -1.48
C2CD3-214ENST00000540057 ELOA3DA6NLF2 546 aaPredicted RBP5.81□□□□□ -1.48
C2CD3-214ENST00000540057 ADARB2-AS1A8MUL3 147 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 KCNQ4P56696 695 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 ELOA3BQ3SY89 546 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 CD163Q86VB7 1156 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 STAG2Q8N3U4 1231 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 ELOA3Q8NG57 546 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 C2orf49Q9BVC5 232 aaPredicted RBP5.81□□□□□ -1.48
C2CD3-214ENST00000540057 WWC3Q9ULE0 1092 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 USP6P35125 1406 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 TNS2Q63HR2 1409 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 KAT6BQ8WYB5 2073 aa5.81□□□□□ -1.48
C2CD3-214ENST00000540057 A6NJR5 290 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 C1QTNF9BB2RNN3 333 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 PIK3R2O00459 728 aa5.8□□□□□ -1.48
C2CD3-214ENST00000540057 PPP1R12BO60237 982 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms