RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 RSRC2Q7L4I2 434 aaKnown RBP20.29■□□□□ 0.84
RAB40C-205ENST00000539661 RABGGTAQ92696 567 aa20.29■□□□□ 0.84
RAB40C-205ENST00000539661 MYD88Q99836 296 aa20.29■□□□□ 0.84
RAB40C-205ENST00000539661 FEZ2Q9UHY8 353 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-205ENST00000539661 PPP2R2CQ9Y2T4 447 aa20.29■□□□□ 0.84
RAB40C-205ENST00000539661 HSPA2P54652 639 aa20.29■□□□□ 0.84
RAB40C-205ENST00000539661 CFAP100Q494V2 611 aa20.29■□□□□ 0.84
RAB40C-205ENST00000539661 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
RAB40C-205ENST00000539661 PAG1Q9NWQ8 432 aa20.29■□□□□ 0.84
RAB40C-205ENST00000539661 SASH3O75995 380 aa20.28■□□□□ 0.84
RAB40C-205ENST00000539661 POLR3DP05423 398 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-205ENST00000539661 TMEM139Q8IV31 216 aa20.28■□□□□ 0.84
RAB40C-205ENST00000539661 MRFAP1Q9Y605 127 aa20.28■□□□□ 0.84
RAB40C-205ENST00000539661 SPEF2Q9C093 1822 aa20.28■□□□□ 0.84
RAB40C-205ENST00000539661 SLC39A14Q15043 492 aa20.28■□□□□ 0.84
RAB40C-205ENST00000539661 NEK11Q8NG66 645 aa20.28■□□□□ 0.84
RAB40C-205ENST00000539661 SMARCE1Q969G3 411 aa20.28■□□□□ 0.84
RAB40C-205ENST00000539661 FAM237AA0A1B0GTK4 181 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 IPO4Q8TEX9 1081 aaKnown RBP20.27■□□□□ 0.84
RAB40C-205ENST00000539661 DPF2Q92785 391 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 AK7Q96M32 723 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 GPR108Q9NPR9 543 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 CWC15Q9P013 229 aaKnown RBP20.27■□□□□ 0.84
RAB40C-205ENST00000539661 HPSEQ9Y251 543 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 AXIN2Q9Y2T1 843 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 SYKP43405 635 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 PPP2R3AQ06190 1150 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 EXOC4Q96A65 974 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 SLIT3O75094 1523 aa20.27■□□□□ 0.84
RAB40C-205ENST00000539661 STX10O60499 249 aa20.26■□□□□ 0.83
RAB40C-205ENST00000539661 OLFM4Q6UX06 510 aa20.26■□□□□ 0.83
RAB40C-205ENST00000539661 JMYQ8N9B5 988 aa20.26■□□□□ 0.83
RAB40C-205ENST00000539661 XAGE3Q8WTP9 111 aa20.26■□□□□ 0.83
RAB40C-205ENST00000539661 PPP6R2O75170 966 aa20.26■□□□□ 0.83
RAB40C-205ENST00000539661 KIF23Q02241 960 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-205ENST00000539661 GOLIM4O00461 696 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
RAB40C-205ENST00000539661 ST5P78524 1137 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 TBX2Q13207 712 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-205ENST00000539661 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 KRBA2Q6ZNG9 492 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 C5P01031 1676 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 CAMTA1Q9Y6Y1 1673 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 MROH7-TTC4A0A0A0MT08 1334 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 MAST3O60307 1309 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 AFDNP55196 1824 aaKnown RBP20.25■□□□□ 0.83
RAB40C-205ENST00000539661 CABLES1Q8TDN4 633 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 GOLGA1Q92805 767 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 BAG1Q99933 345 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-205ENST00000539661 FUT8Q9BYC5 575 aa20.25■□□□□ 0.83
RAB40C-205ENST00000539661 RNF113AO15541 343 aaKnown RBP20.24■□□□□ 0.83
RAB40C-205ENST00000539661 PPFIA3O75145 1194 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 GNG11P61952 73 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 BRD3Q15059 726 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 COPS6Q7L5N1 327 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 CCDC151A5D8V7 595 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 ZSCAN26Q16670 478 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 ANKRD13DQ6ZTN6 518 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 CHST3Q7LGC8 479 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 PROSER2Q86WR7 435 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-205ENST00000539661 ELOA2Q8IYF1 753 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-205ENST00000539661 GOLGA5Q8TBA6 731 aa20.24■□□□□ 0.83
RAB40C-205ENST00000539661 DDX60Q8IY21 1712 aaKnown RBP20.24■□□□□ 0.83
RAB40C-205ENST00000539661 VGLL3A8MV65 326 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 WDHD1O75717 1129 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-205ENST00000539661 PARD6BQ9BYG5 372 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 C19orf44Q9H6X5 657 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 MSL3Q8N5Y2 521 aaKnown RBP20.23■□□□□ 0.83
RAB40C-205ENST00000539661 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 WDR19Q8NEZ3 1342 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 ZNF142P52746 1687 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-205ENST00000539661 TMEM94Q12767 1356 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 KIF28PB7ZC32 967 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 TXLNAP40222 546 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 IQUBQ8NA54 791 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 WDR24Q96S15 920 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 HPS5Q9UPZ3 1129 aa20.23■□□□□ 0.83
RAB40C-205ENST00000539661 ADAMTSL3P82987 1691 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 A0A0G2JLW4 131 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 CPLX1O14810 134 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 MYL6BP14649 208 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 GNL2Q13823 731 aaKnown RBP20.22■□□□□ 0.83
RAB40C-205ENST00000539661 ZNF790Q6PG37 636 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 KLF18A0A0U1RQI7 1052 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 GOLGA8BA8MQT2 603 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 TUBB4BP68371 445 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 ISM2Q6H9L7 571 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 UBE3BQ7Z3V4 1068 aa20.22■□□□□ 0.83
RAB40C-205ENST00000539661 HNRNPLLQ8WVV9 542 aaKnown RBP20.22■□□□□ 0.83
RAB40C-205ENST00000539661 ZCCHC17Q9NP64 241 aaKnown RBP20.22■□□□□ 0.83
RAB40C-205ENST00000539661 TMEM232C9JQI7 657 aa20.21■□□□□ 0.83
RAB40C-205ENST00000539661 MAP2K7O14733 419 aa20.21■□□□□ 0.83
RAB40C-205ENST00000539661 GCP02774 474 aa20.21■□□□□ 0.83
RAB40C-205ENST00000539661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.21■□□□□ 0.83
RAB40C-205ENST00000539661 FANCLQ9NW38 375 aa20.21■□□□□ 0.83
RAB40C-205ENST00000539661 IMMTQ16891 758 aaKnown RBP20.21■□□□□ 0.83
RAB40C-205ENST00000539661 RESP18Q5W5W9 173 aa20.21■□□□□ 0.83
RAB40C-205ENST00000539661 TRIM34Q9BYJ4 488 aa20.21■□□□□ 0.83
RAB40C-205ENST00000539661 RASSF4Q9H2L5 321 aa20.21■□□□□ 0.83
RAB40C-205ENST00000539661 C4AP0C0L4 1744 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms