RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 MYOZ2Q9NPC6 264 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 TSHZ2Q9NRE2 1034 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 CENPFP49454 3210 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 A0A1W2PPC1 479 aa9.04□□□□□ -0.96
LMO3-220ENST00000539232 IPO8O15397 1037 aaKnown RBP9.04□□□□□ -0.96
LMO3-220ENST00000539232 PDE8BO95263 885 aa9.04□□□□□ -0.96
LMO3-220ENST00000539232 PRKCSHP14314 528 aaPredicted RBP9.04□□□□□ -0.96
LMO3-220ENST00000539232 CHAF1AQ13111 956 aaPredicted RBP9.04□□□□□ -0.96
LMO3-220ENST00000539232 UBE4AQ14139 1066 aa9.04□□□□□ -0.96
LMO3-220ENST00000539232 ARMC5Q96C12 935 aa9.04□□□□□ -0.96
LMO3-220ENST00000539232 CFHR5Q9BXR6 569 aa9.04□□□□□ -0.96
LMO3-220ENST00000539232 FZD1Q9UP38 647 aa9.04□□□□□ -0.96
LMO3-220ENST00000539232 STXBP5LQ9Y2K9 1186 aa9.04□□□□□ -0.96
LMO3-220ENST00000539232 SUPT16HQ9Y5B9 1047 aaKnown RBP9.04□□□□□ -0.96
LMO3-220ENST00000539232 MROH5Q6ZUA9 1318 aa9.04□□□□□ -0.96
LMO3-220ENST00000539232 SCN9AQ15858 1988 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 WNT10BO00744 389 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 ZBTB7BO15156 539 aaPredicted RBP9.03□□□□□ -0.96
LMO3-220ENST00000539232 SRGAP3O43295 1099 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 COL9A1P20849 921 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 HIBADHP31937 336 aaKnown RBP9.03□□□□□ -0.96
LMO3-220ENST00000539232 TIMM10P62072 90 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 TFCP2Q12800 502 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 ZNF804AQ7Z570 1209 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 CDAN1Q8IWY9 1227 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 PRMT6Q96LA8 375 aaPredicted RBP9.03□□□□□ -0.96
LMO3-220ENST00000539232 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 TRIM17Q9Y577 477 aa9.03□□□□□ -0.96
LMO3-220ENST00000539232 COL1A1P02452 1464 aaPredicted RBP9.02□□□□□ -0.96
LMO3-220ENST00000539232 CLRN2A0PK11 232 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 PHKA1P46020 1223 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 TM4SF4P48230 202 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 MTX1Q13505 466 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 PUM3Q15397 648 aaKnown RBP9.02□□□□□ -0.97
LMO3-220ENST00000539232 GPR153Q6NV75 609 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 OTOP1Q7RTM1 612 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 ITPRIPQ8IWB1 547 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.02□□□□□ -0.97
LMO3-220ENST00000539232 DZIP1LQ8IYY4 767 aaKnown RBP9.02□□□□□ -0.97
LMO3-220ENST00000539232 CDCA5Q96FF9 252 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 BRCA2P51587 3418 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 ZNF609O15014 1411 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 FAM205AQ6ZU69 1335 aa9.02□□□□□ -0.97
LMO3-220ENST00000539232 SOX1O00570 391 aaPredicted RBP9.01□□□□□ -0.97
LMO3-220ENST00000539232 CIAO1O76071 339 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 GNAI2P04899 355 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 GNAI3P08754 354 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 POLA2Q14181 598 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 CFAP100Q494V2 611 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 MFSD14BQ5SR56 506 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 DCPSQ96C86 337 aaKnown RBP9.01□□□□□ -0.97
LMO3-220ENST00000539232 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 YTHDC1Q96MU7 727 aaKnown RBP9.01□□□□□ -0.97
LMO3-220ENST00000539232 RCAN3Q9UKA8 241 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 COG6Q9Y2V7 657 aa9.01□□□□□ -0.97
LMO3-220ENST00000539232 SPDYE2BA6NHP3 402 aa9□□□□□ -0.97
LMO3-220ENST00000539232 SPDYE6P0CI01 402 aa9□□□□□ -0.97
LMO3-220ENST00000539232 PLA2G5P39877 138 aa9□□□□□ -0.97
LMO3-220ENST00000539232 CACNB3P54284 484 aa9□□□□□ -0.97
LMO3-220ENST00000539232 FKBP1BP68106 108 aa9□□□□□ -0.97
LMO3-220ENST00000539232 ATP8B2P98198 1209 aa9□□□□□ -0.97
LMO3-220ENST00000539232 ATP2B3Q16720 1220 aa9□□□□□ -0.97
LMO3-220ENST00000539232 SIRT2Q8IXJ6 389 aa9□□□□□ -0.97
LMO3-220ENST00000539232 CEP126Q9P2H0 1117 aa9□□□□□ -0.97
LMO3-220ENST00000539232 PTPN22Q9Y2R2 807 aa9□□□□□ -0.97
LMO3-220ENST00000539232 TTC28Q96AY4 2481 aa9□□□□□ -0.97
LMO3-220ENST00000539232 UBE2Q2LH0YL09 131 aa8.99□□□□□ -0.97
LMO3-220ENST00000539232 IFIT1P09914 478 aaKnown RBP8.99□□□□□ -0.97
LMO3-220ENST00000539232 IL15P40933 162 aaPredicted RBP8.99□□□□□ -0.97
LMO3-220ENST00000539232 PRKG1Q13976 671 aa8.99□□□□□ -0.97
LMO3-220ENST00000539232 SULF1Q8IWU6 871 aa8.99□□□□□ -0.97
LMO3-220ENST00000539232 FTSJ3Q8IY81 847 aaKnown RBP8.99□□□□□ -0.97
LMO3-220ENST00000539232 OGFOD1Q8N543 542 aa8.99□□□□□ -0.97
LMO3-220ENST00000539232 DEFB123Q8N688 67 aa8.99□□□□□ -0.97
LMO3-220ENST00000539232 SSH3Q8TE77 659 aa8.99□□□□□ -0.97
LMO3-220ENST00000539232 LPIN2Q92539 896 aa8.99□□□□□ -0.97
LMO3-220ENST00000539232 TTF2Q9UNY4 1162 aaKnown RBP8.99□□□□□ -0.97
LMO3-220ENST00000539232 SLC5A1P13866 664 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 SREBF2Q12772 1141 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 RASGRF1Q13972 1273 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 DLGAP5Q15398 846 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 DIXDC1Q155Q3 683 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 CCDC102BQ68D86 513 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 APOBEC3HQ6NTF7 200 aaKnown RBP8.98□□□□□ -0.97
LMO3-220ENST00000539232 CEP85Q6P2H3 762 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 ZNF384Q8TF68 577 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 DPF3Q92784 378 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 XAGE2Q96GT9 111 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 ZNF333Q96JL9 665 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 R3HDMLQ9H3Y0 253 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 TDRD3Q9H7E2 651 aaKnown RBP8.98□□□□□ -0.97
LMO3-220ENST00000539232 TLR7Q9NYK1 1049 aaKnown RBP8.98□□□□□ -0.97
LMO3-220ENST00000539232 MYO3BQ8WXR4 1341 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 LAMA3Q16787 3333 aa8.98□□□□□ -0.97
LMO3-220ENST00000539232 A0A1B0GUL7 405 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 ALDH1A1P00352 501 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 SLURP2P0DP57 97 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 PRDX5P30044 214 aa8.97□□□□□ -0.97
LMO3-220ENST00000539232 CRKP46108 304 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms