RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 UTP14AQ9BVJ6 771 aaKnown RBP29.1■■■□□ 2.25
RAB40C-204ENST00000538492 SLC5A1P13866 664 aa29.1■■■□□ 2.25
RAB40C-204ENST00000538492 RASGRF1Q13972 1273 aa29.1■■■□□ 2.25
RAB40C-204ENST00000538492 CCDC73Q6ZRK6 1079 aa29.1■■■□□ 2.25
RAB40C-204ENST00000538492 RXRAP19793 462 aa29.09■■■□□ 2.25
RAB40C-204ENST00000538492 SNW1Q13573 536 aaKnown RBP29.09■■■□□ 2.25
RAB40C-204ENST00000538492 PIBF1Q8WXW3 757 aa29.09■■■□□ 2.25
RAB40C-204ENST00000538492 FBXO18Q8NFZ0 1043 aa29.09■■■□□ 2.25
RAB40C-204ENST00000538492 TAOK2Q9UL54 1235 aa29.09■■■□□ 2.25
RAB40C-204ENST00000538492 B4E1Z4 1266 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 MAGEB6Q8N7X4 407 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 STRBPQ96SI9 672 aaKnown RBP29.08■■■□□ 2.25
RAB40C-204ENST00000538492 INCENPQ9NQS7 918 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 ANGEL1Q9UNK9 670 aaKnown RBP29.08■■■□□ 2.25
RAB40C-204ENST00000538492 SPATA31A1Q5TZJ5 1347 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 LRP5O75197 1615 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 LOC102724428A0A0B4J2F2 783 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 SIK1P57059 783 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 FSIP1Q8NA03 581 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 AK7Q96M32 723 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 WDR19Q8NEZ3 1342 aa29.08■■■□□ 2.25
RAB40C-204ENST00000538492 ITPK1Q13572 414 aa29.08■■■□□ 2.24
RAB40C-204ENST00000538492 SENP2Q9HC62 589 aa29.08■■■□□ 2.24
RAB40C-204ENST00000538492 COL22A1Q8NFW1 1626 aaPredicted RBP29.07■■■□□ 2.24
RAB40C-204ENST00000538492 MARCH10Q8NA82 808 aaPredicted RBP29.07■■■□□ 2.24
RAB40C-204ENST00000538492 PCDHA7Q9UN72 937 aa29.07■■■□□ 2.24
RAB40C-204ENST00000538492 CAMTA2O94983 1202 aa29.07■■■□□ 2.24
RAB40C-204ENST00000538492 NOLC1Q14978 699 aaKnown RBP eCLIP29.07■■■□□ 2.24
RAB40C-204ENST00000538492 KCNF1Q9H3M0 494 aa29.07■■■□□ 2.24
RAB40C-204ENST00000538492 CLIC4Q9Y696 253 aa29.07■■■□□ 2.24
RAB40C-204ENST00000538492 NEDD4P46934 1319 aa29.06■■■□□ 2.24
RAB40C-204ENST00000538492 KINO60870 393 aaKnown RBP29.06■■■□□ 2.24
RAB40C-204ENST00000538492 DNTTIP2Q5QJE6 756 aaKnown RBP29.06■■■□□ 2.24
RAB40C-204ENST00000538492 NIP7Q9Y221 180 aaKnown RBP eCLIP29.06■■■□□ 2.24
RAB40C-204ENST00000538492 FAM160A1Q05DH4 1040 aa29.06■■■□□ 2.24
RAB40C-204ENST00000538492 ENGASEQ8NFI3 743 aa29.06■■■□□ 2.24
RAB40C-204ENST00000538492 RTEL1Q9NZ71 1219 aa29.06■■■□□ 2.24
RAB40C-204ENST00000538492 MBD4O95243 580 aa29.05■■■□□ 2.24
RAB40C-204ENST00000538492 ARAP2Q8WZ64 1704 aa29.05■■■□□ 2.24
RAB40C-204ENST00000538492 A0A087WWV3 80 aa29.05■■■□□ 2.24
RAB40C-204ENST00000538492 SH2B2O14492 632 aaPredicted RBP29.05■■■□□ 2.24
RAB40C-204ENST00000538492 TERF1P54274 439 aa29.05■■■□□ 2.24
RAB40C-204ENST00000538492 MAP3K12Q12852 859 aa29.05■■■□□ 2.24
RAB40C-204ENST00000538492 CCDC144CPQ8IYA2 1237 aa29.05■■■□□ 2.24
RAB40C-204ENST00000538492 AIFM3Q96NN9 605 aa29.05■■■□□ 2.24
RAB40C-204ENST00000538492 CDCA7Q9BWT1 371 aaPredicted RBP29.05■■■□□ 2.24
RAB40C-204ENST00000538492 ARMT1Q9H993 441 aa29.05■■■□□ 2.24
RAB40C-204ENST00000538492 MYH14Q7Z406 1995 aaKnown RBP29.04■■■□□ 2.24
RAB40C-204ENST00000538492 C4AP0C0L4 1744 aa29.04■■■□□ 2.24
RAB40C-204ENST00000538492 C4BP0C0L5 1744 aa29.04■■■□□ 2.24
RAB40C-204ENST00000538492 METAP2P50579 478 aaKnown RBP eCLIP29.04■■■□□ 2.24
RAB40C-204ENST00000538492 BCAMP50895 628 aa29.04■■■□□ 2.24
RAB40C-204ENST00000538492 TDRD7Q8NHU6 1098 aaKnown RBP29.04■■■□□ 2.24
RAB40C-204ENST00000538492 ERCC4Q92889 916 aaPredicted RBP29.04■■■□□ 2.24
RAB40C-204ENST00000538492 TRIM5Q9C035 493 aa29.04■■■□□ 2.24
RAB40C-204ENST00000538492 EPB41L4AQ9HCS5 686 aaPredicted RBP29.04■■■□□ 2.24
RAB40C-204ENST00000538492 KIF28PB7ZC32 967 aa29.04■■■□□ 2.24
RAB40C-204ENST00000538492 C11orf57Q6ZUT1 292 aaPredicted RBP29.04■■■□□ 2.24
RAB40C-204ENST00000538492 AHDC1Q5TGY3 1603 aaPredicted RBP29.03■■■□□ 2.24
RAB40C-204ENST00000538492 ZMYM6O95789 1325 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 GOLGA6L6A8MZA4 724 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 CTAGE5O15320 804 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 CTDSPL2Q05D32 466 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 STK38Q15208 465 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 CCDC152Q4G0S7 254 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 MICU3Q86XE3 530 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 LINC00301Q8NCQ3 95 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 A0A1B0GVL5 298 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 SF3A1Q15459 793 aaKnown RBP29.03■■■□□ 2.24
RAB40C-204ENST00000538492 IFNL3Q8IZI9 196 aa29.03■■■□□ 2.24
RAB40C-204ENST00000538492 MYSM1Q5VVJ2 828 aa29.02■■■□□ 2.24
RAB40C-204ENST00000538492 APOA5Q6Q788 366 aa29.02■■■□□ 2.24
RAB40C-204ENST00000538492 NAPBQ9H115 298 aa29.02■■■□□ 2.24
RAB40C-204ENST00000538492 IGHMBP2P38935 993 aaKnown RBP29.02■■■□□ 2.24
RAB40C-204ENST00000538492 PARP10Q53GL7 1025 aa29.02■■■□□ 2.24
RAB40C-204ENST00000538492 MRPS27Q92552 414 aaKnown RBP29.02■■■□□ 2.24
RAB40C-204ENST00000538492 PATL2C9JE40 543 aaKnown RBP29.01■■■□□ 2.23
RAB40C-204ENST00000538492 DRC7Q8IY82 874 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 PHKBQ93100 1093 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 MYL10Q9BUA6 226 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 PYCARDQ9ULZ3 195 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 PHLPP1O60346 1717 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 UQCRHLA0A096LP55 91 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 NUTM2BA6NNL0 878 aaPredicted RBP29.01■■■□□ 2.23
RAB40C-204ENST00000538492 NUTM2EB1AL46 878 aaPredicted RBP29.01■■■□□ 2.23
RAB40C-204ENST00000538492 NTSR2O95665 410 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 UQCRHP07919 91 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 PTGS1P23219 599 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 CDC27P30260 824 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 ADALQ6DHV7 355 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 NFXL1Q6ZNB6 911 aa29.01■■■□□ 2.23
RAB40C-204ENST00000538492 NUTM2AQ8IVF1 878 aaPredicted RBP29.01■■■□□ 2.23
RAB40C-204ENST00000538492 PRKAB2O43741 272 aa29■■■□□ 2.23
RAB40C-204ENST00000538492 KIF23Q02241 960 aaPredicted RBP29■■■□□ 2.23
RAB40C-204ENST00000538492 STX1AQ16623 288 aa29■■■□□ 2.23
RAB40C-204ENST00000538492 BRAPQ7Z569 592 aa29■■■□□ 2.23
RAB40C-204ENST00000538492 IGDCC4Q8TDY8 1250 aa29■■■□□ 2.23
RAB40C-204ENST00000538492 THRAP3Q9Y2W1 955 aaKnown RBP29■■■□□ 2.23
RAB40C-204ENST00000538492 ZNF75DP51815 510 aa28.99■■■□□ 2.23
RAB40C-204ENST00000538492 SYNE3Q6ZMZ3 975 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms