RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 GOLGA8BA8MQT2 603 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 BCAMP50895 628 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 CHRNDQ07001 517 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 MAP3K12Q12852 859 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 MAGEB6Q8N7X4 407 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 AIDAQ96BJ3 306 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 EPB41L4AQ9HCS5 686 aaPredicted RBP16.44■□□□□ 0.22
LIMK1-208ENST00000538333 RCOR1Q9UKL0 485 aa16.44■□□□□ 0.22
LIMK1-208ENST00000538333 TIAM2Q8IVF5 1701 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 CCDC192P0DO97 292 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 CYB5R4Q7L1T6 521 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 CLSTN2Q9H4D0 955 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 CCDC39Q9UFE4 941 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 USP25Q9UHP3 1055 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 DHX16O60231 1041 aaKnown RBP16.43■□□□□ 0.22
LIMK1-208ENST00000538333 NR1I2O75469 434 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 APPP05067 770 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 MSNP26038 577 aaKnown RBP16.43■□□□□ 0.22
LIMK1-208ENST00000538333 TRDNQ13061 729 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 VPS72Q15906 364 aa16.43■□□□□ 0.22
LIMK1-208ENST00000538333 FTOQ9C0B1 505 aaKnown RBP eCLIP16.43■□□□□ 0.22
LIMK1-208ENST00000538333 ANGEL1Q9UNK9 670 aaKnown RBP16.43■□□□□ 0.22
LIMK1-208ENST00000538333 CNTNAP4Q9C0A0 1308 aa16.42■□□□□ 0.22
LIMK1-208ENST00000538333 PATL2C9JE40 543 aaKnown RBP16.42■□□□□ 0.22
LIMK1-208ENST00000538333 GUCY1B3Q02153 619 aa16.42■□□□□ 0.22
LIMK1-208ENST00000538333 CAMK4Q16566 473 aa16.42■□□□□ 0.22
LIMK1-208ENST00000538333 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
LIMK1-208ENST00000538333 USP28Q96RU2 1077 aa16.42■□□□□ 0.22
LIMK1-208ENST00000538333 ZKSCAN5Q9Y2L8 839 aa16.42■□□□□ 0.22
LIMK1-208ENST00000538333 NEDD4P46934 1319 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 SH2B2O14492 632 aaPredicted RBP16.41■□□□□ 0.22
LIMK1-208ENST00000538333 RGL2O15211 777 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 MBD4O95243 580 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 SF3B3Q15393 1217 aaKnown RBP16.41■□□□□ 0.22
LIMK1-208ENST00000538333 ERFEQ4G0M1 354 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 IFNL3Q8IZI9 196 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 CDC5LQ99459 802 aaKnown RBP16.41■□□□□ 0.22
LIMK1-208ENST00000538333 TNMDQ9H2S6 317 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 ZNF804BA4D1E1 1349 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 KDM4AO75164 1064 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 MRVI1Q9Y6F6 885 aa16.41■□□□□ 0.22
LIMK1-208ENST00000538333 BTAF1O14981 1849 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 GSG1L2A8MUP6 293 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 B4E1Z4 1266 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 KCNQ4P56696 695 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 CEBPZQ03701 1054 aaKnown RBP16.4■□□□□ 0.22
LIMK1-208ENST00000538333 TYRO3Q06418 890 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 ZNF396Q96N95 335 aaPredicted RBP16.4■□□□□ 0.22
LIMK1-208ENST00000538333 ARMT1Q9H993 441 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 ORC3Q9UBD5 711 aaPredicted RBP16.4■□□□□ 0.22
LIMK1-208ENST00000538333 COL24A1Q17RW2 1714 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 ECM29Q5VYK3 1845 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 PNPLA7Q6ZV29 1317 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
LIMK1-208ENST00000538333 PTF1AQ7RTS3 328 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 IGDCC4Q8TDY8 1250 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
LIMK1-208ENST00000538333 ADCY5O95622 1261 aa16.39■□□□□ 0.21
LIMK1-208ENST00000538333 CKAP2LQ8IYA6 745 aa16.39■□□□□ 0.21
LIMK1-208ENST00000538333 RGS22Q8NE09 1264 aa16.39■□□□□ 0.21
LIMK1-208ENST00000538333 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
LIMK1-208ENST00000538333 TMEM87BQ96K49 555 aa16.39■□□□□ 0.21
LIMK1-208ENST00000538333 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
LIMK1-208ENST00000538333 TACC3Q9Y6A5 838 aa16.39■□□□□ 0.21
LIMK1-208ENST00000538333 CPLX1O14810 134 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 APOA5Q6Q788 366 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 SGMS1Q86VZ5 419 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 FAM200AQ8TCP9 573 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 NAPBQ9H115 298 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 SENP2Q9HC62 589 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 COL1A1P02452 1464 aaPredicted RBP16.38■□□□□ 0.21
LIMK1-208ENST00000538333 AP5Z1O43299 807 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 ANKRD18AQ8IVF6 992 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 LY9Q9HBG7 655 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 INCENPQ9NQS7 918 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 BSDC1Q9NW68 430 aaPredicted RBP16.38■□□□□ 0.21
LIMK1-208ENST00000538333 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 THSD7AQ9UPZ6 1657 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 CACNA1SQ13698 1873 aa16.38■□□□□ 0.21
LIMK1-208ENST00000538333 PRKAB2O43741 272 aa16.37■□□□□ 0.21
LIMK1-208ENST00000538333 GNAT2P19087 354 aa16.37■□□□□ 0.21
LIMK1-208ENST00000538333 TBC1D9BQ66K14 1250 aa16.37■□□□□ 0.21
LIMK1-208ENST00000538333 NGLY1Q96IV0 654 aa16.37■□□□□ 0.21
LIMK1-208ENST00000538333 GOLPH3LQ9H4A5 285 aa16.37■□□□□ 0.21
LIMK1-208ENST00000538333 RTEL1Q9NZ71 1219 aa16.37■□□□□ 0.21
LIMK1-208ENST00000538333 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
LIMK1-208ENST00000538333 CTDSPL2Q05D32 466 aa16.37■□□□□ 0.21
LIMK1-208ENST00000538333 SNW1Q13573 536 aaKnown RBP16.37■□□□□ 0.21
LIMK1-208ENST00000538333 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
LIMK1-208ENST00000538333 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
LIMK1-208ENST00000538333 FNBP4Q8N3X1 1017 aaPredicted RBP16.37■□□□□ 0.21
LIMK1-208ENST00000538333 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms